NO07G02870, NO07G02870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G02870 vs. NCBI_GenBank
Match: SNV19412.1 (Uncharacterised protein [Rhodococcus rhodochrous]) HSP 1 Score: 86.7 bits (213), Expect = 2.800e-13 Identity = 51/158 (32.28%), Postives = 78/158 (49.37%), Query Frame = 0 Query: 69 LAGVAWLIKRLQRKTGPAL-FNPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTYDLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYVEE 226 +A +A+L + PA P CAWRF+ N NVAFPD+ + Y V+ + GD + V+ ++P ARY S TY N + +LRD I+PD N +A+ TA L Q + + + NE+R +P G + + R+YV + Sbjct: 14 VAAIAFLCASITVTVPPAAGAEPALCAWRFMSNETVLNVAFPDVNATYWVLPYALGPGDSIE-VSGTYPAARYFSLNTYGTN-FDTVDTLRDDMIVPDPGSGNPFADATARNLPPAQQKWHATVVPGPSDHARNEIRGIPEGQSTPVGFLIIRVYVPD 169
BLAST of NO07G02870 vs. NCBI_GenBank
Match: SNX92929.1 (hypothetical protein SAMN05447004_11743 [Rhodococcus sp. OK270] >PTR38558.1 hypothetical protein C8K38_11743 [Rhodococcus sp. OK611]) HSP 1 Score: 85.9 bits (211), Expect = 4.700e-13 Identity = 59/187 (31.55%), Postives = 87/187 (46.52%), Query Frame = 0 Query: 51 PHSPRSLVRRSQLLWMVTLA--GVAWLIKRLQRKTGPALFNPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTY--DLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFF---RIYVEEALQGP 231 P S R ++L ++ A A+ + + PA P CAWRF+ N NVAFPD + Y V+ + D +L D +P ARY S TY DLNT+ +LRD I+PD N + + + A E G + + + N++RALP G S + F R+YV + + P Sbjct: 2 PDSARHSTPAMRVLLVLACAVLAAAFGAPAMAARAAPAGPESPACAWRFMSNETVLNVAFPDANATYWVLPYALGGDDRIELSGD-YPAARYFSLNTYGTDLNTV---DTLRDDQIVPDRGSGNPFVDPSPAGSPESAGRWHATVVPGEADHALNQIRALPAGAASQTVPMGFLIIRVYVPDDVASP 184
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_097213314.1 (MULTISPECIES: hypothetical protein [Rhodococcus]) HSP 1 Score: 85.5 bits (210), Expect = 6.100e-13 Identity = 53/154 (34.42%), Postives = 75/154 (48.70%), Query Frame = 0 Query: 82 KTGPALFNPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTY--DLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFF---RIYVEEALQGP 231 + PA P CAWRF+ N NVAFPD + Y V+ + D +L D +P ARY S TY DLNT+ +LRD I+PD N + + + A E G + + + N++RALP G S + F R+YV + + P Sbjct: 24 RAAPAGPESPACAWRFMSNETVLNVAFPDANATYWVLPYALGGDDRIELSGD-YPAARYFSLNTYGTDLNTV---DTLRDDQIVPDRGSGNPFVDPSPAGSPESAGRWHATVVPGEADHALNQIRALPAGAASQTVPMGFLIIRVYVPDDVASP 173
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_026061928.1 (hypothetical protein [Rhodococcus rhodochrous]) HSP 1 Score: 85.1 bits (209), Expect = 8.000e-13 Identity = 51/158 (32.28%), Postives = 77/158 (48.73%), Query Frame = 0 Query: 69 LAGVAWLIKRLQRKTGPAL-FNPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTYDLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYVEE 226 +A +A L + PA P CAWRF+ N NVAFPD+ + Y V+ + GD + V+ ++P ARY S TY N + +LRD I+PD N +A+ TA L Q + + + NE+R +P G + + R+YV + Sbjct: 14 VAAIALLCASITVTVPPAAGAEPALCAWRFMSNETVLNVAFPDVNATYWVLPYALGPGDSIE-VSGTYPAARYFSLNTYGTN-FDTVDTLRDDMIVPDPGSGNPFADATARNLPPSQQKWRATVVPGPADHARNEIRGVPEGQSTPVGFLIIRVYVPD 169
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_063029677.1 (MULTISPECIES: hypothetical protein [Nocardia] >PSR62756.1 hypothetical protein C8259_13310 [Nocardia nova]) HSP 1 Score: 85.1 bits (209), Expect = 8.000e-13 Identity = 53/133 (39.85%), Postives = 70/133 (52.63%), Query Frame = 0 Query: 91 PYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTYDLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYV 224 P CAWRF+ N NVAFPD + Y V+ + GD +L A S+P ARY S TY N L + +LRD I PD N +A TAA +++ + +TG D NE+RALP + V R+YV Sbjct: 27 PLCAWRFMSNSTVLNVAFPDANATYWVLPYALGPGDSIEL-AGSYPAARYFSLNTYGTN-LDTVDTLRDNQIAPDPGSANPFAAPTAAPETQRR-WHARLVTGAADHG-RNEIRALPAAQNAPIGFVIIRVYV 155
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_072814328.1 (hypothetical protein [Rhodococcus zopfii]) HSP 1 Score: 84.0 bits (206), Expect = 1.800e-12 Identity = 54/165 (32.73%), Postives = 84/165 (50.91%), Query Frame = 0 Query: 69 LAGVAWLIKRLQRKTGP--ALFNPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTYDLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQ-GGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYVEEALQGP 231 +A VA+L+ + P A + P CAWRF+ + NVAFPD+ + Y V+ + GD +L + ++ ARY S TYD N + +LRD I+PD N + + +A L Q + +TG D + NE++ALP G + + R+YV + P Sbjct: 14 VAAVAFLLASVTSTVLPPAASADTPLCAWRFMSDETVLNVAFPDVNATYWVLPYALGPGDSIEL-SGNYTAARYFSLNTYDTN-FDTIDTLRDNMIVPDSGSGNPFRDASARSLPPSQRKWHATLVTGPAD-HARNEIQALPAGQGTPAGFLIIRVYVPDDAASP 175
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_062984734.1 (hypothetical protein [Nocardia salmonicida]) HSP 1 Score: 83.6 bits (205), Expect = 2.300e-12 Identity = 52/144 (36.11%), Postives = 73/144 (50.69%), Query Frame = 0 Query: 85 PALFNPP---YCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTY--DLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYV 224 PA NPP CAWRF+ N NVAFPD S Y +M + GD +L + ++P ARY S TY DL+T+ +LRD I+ D N + + AA L Q + + + NE++A+ NG + V R+YV Sbjct: 27 PASANPPDSALCAWRFMSNSTVLNVAFPDANSTYWLMPYALGPGDSIEL-SGTYPAARYFSLNTYGTDLDTV---DTLRDDQIVADPGSANPFVDAAAASLPASQRRWHATLVNGPADHSRNEIQAVANGQSTPIGFVIVRVYV 166
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_067451526.1 (hypothetical protein [Nocardia alba]) HSP 1 Score: 83.2 bits (204), Expect = 3.000e-12 Identity = 56/160 (35.00%), Postives = 82/160 (51.25%), Query Frame = 0 Query: 93 CAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTY--DLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQL-GEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYV---EEALQGPLQSPWGHLPPYGKELA 247 CAWRF+ N NVAFPD S Y +M + GD +L + ++P ARY S TY DL+T+ +LRD IIPD N Y + +A L +Q + + G D + NE++A+ +G + V R+YV +L G + P L G ++A Sbjct: 34 CAWRFMSNSTVLNVAFPDANSTYWLMPYALGPGDSIEL-SGTYPAARYFSLNTYGTDLDTV---DTLRDDQIIPDPGSANPYVDASAEALPASRQRWHATLVNGPADHS-RNEIQAVASGQGTPIGFVIIRVYVPTDPNSLSGGVGLPDAKLSIGGSDVA 188
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_038554218.1 (hypothetical protein [Nocardia nova] >AHH19479.1 hypothetical protein NONO_c46950 [Nocardia nova SH22a]) HSP 1 Score: 82.8 bits (203), Expect = 4.000e-12 Identity = 48/140 (34.29%), Postives = 73/140 (52.14%), Query Frame = 0 Query: 85 PALFNPPYCAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTYDLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQL-GEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFFRIYV 224 P+ +P CAWRF+ N NVAFPD + Y V+ + GD +L + ++P ARY S TY N + +LRD I+PD N + + AA + ++ + +TG D N N++RALP + + R+YV Sbjct: 21 PSPGDPALCAWRFMSNDTVLNVAFPDANATYWVLPFALGPGDSIEL-SGTYPDARYFSLNTYGTN-FDTVDTLRDDQIVPDPGSGNPFTDAAAANIPAAQRRWHATLVTGPADHN-RNQIRALPPSQTAPIGFLIIRVYV 157
BLAST of NO07G02870 vs. NCBI_GenBank
Match: WP_077041721.1 (hypothetical protein [Rhodococcus sp. MTM3W5.2] >AQA24850.1 hypothetical protein BTZ20_3049 [Rhodococcus sp. MTM3W5.2]) HSP 1 Score: 82.4 bits (202), Expect = 5.200e-12 Identity = 50/143 (34.97%), Postives = 71/143 (49.65%), Query Frame = 0 Query: 93 CAWRFVGNHDAWNVAFPDMRSLYHVMQMQMNEGDEFKLVADSFPYARYASYQTY--DLNTLMSHQSLRDVDIIPDDNGPNCYANLTAAQLGEKQGGYTIYITGHGDQNYTNELRALPNGVRSGQFDVFF---RIYVEEALQGP 231 CAWRF+ N NVAFPD + Y V+ + D +L D +P ARY S TY DLNT+ +LRD I+PD G N + + ++A E + + + N++RALP G S + F R+YV + P Sbjct: 35 CAWRFMSNETVLNVAFPDANATYWVLPYALGGDDRIELSGD-YPAARYFSLNTYGTDLNTV---DTLRDDQIVPDQGGGNPFVDPSSAGSPEPAQSWRATVVPGEADHALNQIRALPTGAASQTVPMGFLIIRVYVPDDAASP 173 The following BLAST results are available for this feature:
BLAST of NO07G02870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02870 ID=NO07G02870|Name=NO07G02870|organism=Nannochloropsis oceanica|type=gene|length=3337bpback to top protein sequence of NO07G02870.1 >NO07G02870.1-protein ID=NO07G02870.1-protein|Name=NO07G02870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=601bpback to top Synonyms
Publications
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