NO07G02810, NO07G02810 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02810 vs. NCBI_GenBank
Match: EWM27102.1 (LETM1-like protein [Nannochloropsis gaditana]) HSP 1 Score: 487.6 bits (1254), Expect = 3.400e-134 Identity = 252/336 (75.00%), Postives = 284/336 (84.52%), Query Frame = 0 Query: 49 ISSHPNMPGAFVGGIIQGIGNTAKRVKEGTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYLSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKENDRMRHLRAMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYLKTIDRPGLVAP--KQAKSEEEWDSVELNENNLRFALLGLNMVGLVREARENSALRALFG 383 + +H P A VGG++QGIGN+ +R++EGT +LW NTKQLG LKKR ++GE+L+F EYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYL+SDEKLQRCQQRNF RVR VV HLMSLQQE VAPH+KENDRMRHLR ME LL TT+K G +ALKQVG E VLF D KGR KADLR VPRPFLVSVCNAIGMF+KFIPAA LR MLSDYL+KI+ESDQ+ LL TNVDKLGRDDLLDAC+QRALSLGDA+ AMR +LKSYLK + RP L P ++ +SE+E V LNENN+RFALLGLNMVGLVR+A+ENSALRALFG Sbjct: 55 LPAHVLPPLAIVGGLVQGIGNSLRRLQEGTIDLWGNTKQLGGLKKRFARGETLTFPEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYLNSDEKLQRCQQRNFARVRGVVTHLMSLQQEAVAPHRKENDRMRHLRTMERLLHTTTKAGPGKALKQVGDLEYVLFCRPKRDGKGRQKADLRAVPRPFLVSVCNAIGMFHKFIPAAGLRTMLSDYLWKIDESDQV-LLNTNVDKLGRDDLLDACAQRALSLGDASPDAMRANLKSYLKCVSRPSLAPPVVRKKESEQEGKVVALNENNMRFALLGLNMVGLVRDAKENSALRALFG 389
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_005855367.1 (hypothetical protein NGA_2009600, partial [Nannochloropsis gaditana CCMP526] >EKU20993.1 hypothetical protein NGA_2009600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 487.6 bits (1254), Expect = 3.400e-134 Identity = 252/336 (75.00%), Postives = 284/336 (84.52%), Query Frame = 0 Query: 49 ISSHPNMPGAFVGGIIQGIGNTAKRVKEGTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYLSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKENDRMRHLRAMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYLKTIDRPGLVAP--KQAKSEEEWDSVELNENNLRFALLGLNMVGLVREARENSALRALFG 383 + +H P A VGG++QGIGN+ +R++EGT +LW NTKQLG LKKR ++GE+L+F EYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYL+SDEKLQRCQQRNF RVR VV HLMSLQQE VAPH+KENDRMRHLR ME LL TT+K G +ALKQVG E VLF D KGR KADLR VPRPFLVSVCNAIGMF+KFIPAA LR MLSDYL+KI+ESDQ+ LL TNVDKLGRDDLLDAC+QRALSLGDA+ AMR +LKSYLK + RP L P ++ +SE+E V LNENN+RFALLGLNMVGLVR+A+ENSALRALFG Sbjct: 58 LPAHVLPPLAIVGGLVQGIGNSLRRLQEGTIDLWGNTKQLGGLKKRFARGETLTFPEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYLNSDEKLQRCQQRNFARVRGVVTHLMSLQQEAVAPHRKENDRMRHLRTMERLLHTTTKAGPGKALKQVGDLEYVLFCRPKRDGKGRQKADLRAVPRPFLVSVCNAIGMFHKFIPAAGLRTMLSDYLWKIDESDQV-LLNTNVDKLGRDDLLDACAQRALSLGDASPDAMRANLKSYLKCVSRPSLAPPVVRKKESEQEGKVVALNENNMRFALLGLNMVGLVRDAKENSALRALFG 392
BLAST of NO07G02810 vs. NCBI_GenBank
Match: KOO26378.1 (hypothetical protein Ctob_002393 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 79.7 bits (195), Expect = 2.200e-11 Identity = 88/342 (25.73%), Postives = 140/342 (40.94%), Query Frame = 0 Query: 24 SSIQPLFPVLPVARSK-HSPRHSIAHI-SSHPNMPGAFVGGIIQGIGNTAKRVKEGTQELWHNTKQLGALKKRHSQ-GESLSFEEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYLSSDEKLQRCQQRNFGRVRAVVNHLMSL-QQETVAPHKKENDRMRHLRAMENLLRTTSKGGAV--------------------------QALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYLKTIDRPGLVA 336 S++Q L V RS H + + +S NMP I + KR + GT+++W N K G +++R + GE+LS+ E L++++ D K + + PE P L F+P +PST+ + ++ +R R A + L +L +Q+ +K A E LLR S A+ +A K+ +G + G KA L G+ +P L + C IG+ P R L +L + D IL Q LGR++L++AC R A +RR L +L + G VA Sbjct: 4 SALQLLLLASSVTRSSAFGDDHMVQDLKASMSNMPAM--------IRDNVKRFQVGTKQMWLNGKAAGVVRRRVERGGEALSYAELQLLRRSGEDTFKLLRAGAMWLVAPELFPVLLYFYPRALPSTFETETDRERRRGTLARMRTAAALELLSTLEEQKATNTGRKALAAAEQCEAAELLLRAKSSSHALAFVQGRALALAPEAKIYQHYNRIAEREAQKRRPRKDGKVPEVSVGQSSGLGKAALMGLSQPVLKAGCKLIGVSGP-QPGMFRRGALGAHLEGLVLEDSILAAQ-GTSALGREELVEACLDRGFGSTALNDAQLRRLLDEWLHLVRSRGDVA 335
BLAST of NO07G02810 vs. NCBI_GenBank
Match: OZJ02619.1 (hypothetical protein BZG36_03837 [Bifiguratus adelaidae]) HSP 1 Score: 75.1 bits (183), Expect = 5.300e-10 Identity = 57/255 (22.35%), Postives = 115/255 (45.10%), Query Frame = 0 Query: 71 AKRVKEGTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTMSKPEFTPFLCSFFPAVVPSTYLSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKENDRMRHLRAMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 A+ K+GT+ LW N K L+++ SQG LS E+ L+ +++ D K V + + E+ P + F P ++PST + ++ +L++ +++ + + + +++ + A K++ + G ++ KQ G P +L+ + RP L + C +G+ ++F L L +L + DQ L+ + VD L +L A +R + D + ++R LK ++ Sbjct: 30 ARFYKDGTKLLWANHKHAKELREKESQGHVLSRSEFQLIHRSNKDFRKLVPFVITFIIVGEWIPLVVMFVPGLIPSTCI-TNAQLEKLRRKMYEKRNVMSQNVLESSKSIKAISKED---------------FANVNGMIRISKQFG-----------------PDFELQHIDRPHLKAYCKFMGLGHRFATKGMLIRRLQSHLDYLRRDDQ-LIAKDGVDSLVLPELQSAAEERGMRSVDVSETHLKRSLKYWI 250
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_009762082.1 (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Nicotiana sylvestris]) HSP 1 Score: 72.8 bits (177), Expect = 2.600e-9 Identity = 76/260 (29.23%), Postives = 125/260 (48.08%), Query Frame = 0 Query: 77 GTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTMSK-PEF-TPFLCSFFPAVVPSTY---LSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKE--NDRMRHLR----AMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 GT+ LW + + L + + G+SLS E + +T+ DI + V +A+F + EF P + FP ++PST+ + +E L+R ++ A + + L QETV KE N R L+ ++ + +G +V + +G + LF T L + RP LV++C +G+ N F A LR ML L KI D+++ + V+ L D+L AC +R L LG + MR+ L+ +L Sbjct: 222 GTKLLWADVRICSRLLLKTANGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFLAVFPNMLPSTFQDKMKEEEALKR-------KLNARIEYAKFL-QETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGASVSNEEILGFAK--LFNDELT---------LDNISRPRLVNMCKYMGI-NPFGTDAYLRFMLRKRLQKIKNDDKMIKAE-GVESLSEDELRQACRERGL-LGLLSVVEMRQQLRDWL 459
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_004250084.1 (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Solanum lycopersicum]) HSP 1 Score: 72.4 bits (176), Expect = 3.400e-9 Identity = 74/260 (28.46%), Postives = 124/260 (47.69%), Query Frame = 0 Query: 77 GTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTM--SKPEFTPFLCSFFPAVVPSTY---LSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKE--NDRMRHLR----AMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 GT+ LW + + L + ++G+SLS E + +T+ DI + V +A+F + P + FP ++PST+ + +E L+R ++ A + + L QETV KE N R L+ ++ + +G +V + +G + LF T L + RP LV++C +G+ N F A LR ML L KI D+++ + V+ L D+L AC +R L LG + MR+ L+ +L Sbjct: 222 GTKLLWADVRICSRLLLKTAKGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMELLLPVFLALFPNMLPSTFQDKMKEEEALKR-------KLNARIEYAKFL-QETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGASVSNEEILGFAK--LFNDELT---------LDNISRPRLVNMCKYMGI-NPFGTDAYLRFMLRKRLQKIKNDDKMIQAE-GVESLSEDELRQACRERGL-LGLLSVEEMRQQLRDWL 459
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_015058720.1 (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Solanum pennellii]) HSP 1 Score: 72.4 bits (176), Expect = 3.400e-9 Identity = 74/260 (28.46%), Postives = 124/260 (47.69%), Query Frame = 0 Query: 77 GTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTM--SKPEFTPFLCSFFPAVVPSTY---LSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKE--NDRMRHLR----AMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 GT+ LW + + L + ++G+SLS E + +T+ DI + V +A+F + P + FP ++PST+ + +E L+R ++ A + + L QETV KE N R L+ ++ + +G +V + +G + LF T L + RP LV++C +G+ N F A LR ML L KI D+++ + V+ L D+L AC +R L LG + MR+ L+ +L Sbjct: 222 GTKLLWADVRICSRLLLKTAKGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMELLLPVFLALFPNMLPSTFQDKMKEEEALKR-------KLNARIEYAKFL-QETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGASVSNEEILGFAK--LFNDELT---------LDNISRPRLVNMCKYMGI-NPFGTDAYLRFMLRKRLQKIKNDDKMIQAE-GVESLSEDELRQACRERGL-LGLLSVEEMRQQLRDWL 459
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_016450802.1 (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like, partial [Nicotiana tabacum]) HSP 1 Score: 72.4 bits (176), Expect = 3.400e-9 Identity = 76/260 (29.23%), Postives = 125/260 (48.08%), Query Frame = 0 Query: 77 GTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTMSK-PEF-TPFLCSFFPAVVPSTY---LSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKE--NDRMRHLR----AMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 GT+ LW + + L + + G+SLS E + +T+ DI + V +A+F + EF P + FP ++PST+ + +E L+R ++ A + + L QETV KE N R L+ ++ + +G +V + +G + LF T L + RP LV++C +G+ N F A LR ML L KI D+++ + V+ L D+L AC +R L LG + MR+ L+ +L Sbjct: 222 GTKLLWADVRICSRLLLKTANGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFLAVFPNMLPSTFQDKMKEEEALKR-------KLNARIEYAKFL-QETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGASVSNEEILGFAK--LFNDELT---------LDNISRPRLVNMCKYMGI-NPFGTDAYLRFMLRKRLQKIKNDDKMIKAE-GVESLSEDELRQACRERGL-LGLLSVEEMRQQLRDWL 459
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_019261501.1 (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial [Nicotiana attenuata] >OIT38449.1 hypothetical protein A4A49_07794 [Nicotiana attenuata]) HSP 1 Score: 72.0 bits (175), Expect = 4.500e-9 Identity = 75/260 (28.85%), Postives = 125/260 (48.08%), Query Frame = 0 Query: 77 GTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTMSK-PEF-TPFLCSFFPAVVPSTY---LSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKE--NDRMRHLR----AMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 GT+ LW + + L + + G+SLS E + +T+ DI + V +A+F + EF P + FP ++PST+ + +E L+R ++ A + + L QETV KE N R L+ ++ + +G +V + +G + LF T L + RP LV++C +G+ N F A LR ML L KI D+++ + ++ L D+L AC +R L LG + MR+ L+ +L Sbjct: 230 GTKLLWADVRICSRLLLKTANGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMEFLLPVFLAVFPNMLPSTFQDKMKEEEALKR-------KLNARIEYAKFL-QETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGASVSNEEILGFAK--LFNDELT---------LDNISRPRLVNMCKYMGI-NPFGTDAYLRFMLRKRLQKIKNDDKMIKAE-GIESLSEDELRQACRERGL-LGLLSVEEMRQQLRDWL 467
BLAST of NO07G02810 vs. NCBI_GenBank
Match: XP_016551111.1 (PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like [Capsicum annuum]) HSP 1 Score: 71.6 bits (174), Expect = 5.900e-9 Identity = 74/260 (28.46%), Postives = 123/260 (47.31%), Query Frame = 0 Query: 77 GTQELWHNTKQLGALKKRHSQGESLSFEEYNLMQKTSGDIAKFVGLALFTM--SKPEFTPFLCSFFPAVVPSTY---LSSDEKLQRCQQRNFGRVRAVVNHLMSLQQETVAPHKKE--NDRMRHLR----AMENLLRTTSKGGAVQALKQVGSTEGVLFTSRTTDRKGRPKADLRGVPRPFLVSVCNAIGMFNKFIPAAALRVMLSDYLFKINESDQILLLQTNVDKLGRDDLLDACSQRALSLGDATSAAMRRHLKSYL 326 GT+ LW + + L + ++G+SLS E + +T+ DI + V +A+F + P + FP ++PST+ + +E L+R ++ A + + L QETV KE N R L+ ++ + +G V + +G + LF T L + RP LV++C +G+ N F A LR ML L KI D+++ + V+ L D+L AC +R L LG + MR+ L+ +L Sbjct: 221 GTKLLWADVRICSRLLLKTAKGKSLSRRERQQLTRTTADIFRLVPVAVFIIVPFMELLLPVFLTLFPNMLPSTFQDKMKEEEALKR-------KLNARIEYAKFL-QETVKEMAKEVKNSRSGELKNTAEDLDEFMNKVRRGARVSNEEILGFAK--LFNDELT---------LDNISRPRLVNMCKYMGI-NPFGTDAYLRFMLRKRLQKIKNDDKMIQAE-GVESLSEDELRQACRERGL-LGLLSVEEMRQQLRDWL 458 The following BLAST results are available for this feature:
BLAST of NO07G02810 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02810 ID=NO07G02810|Name=NO07G02810|organism=Nannochloropsis oceanica|type=gene|length=1155bpback to top protein sequence of NO07G02810.1 >NO07G02810.1-protein ID=NO07G02810.1-protein|Name=NO07G02810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=385bpback to top Synonyms
Publications
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