NO07G02600, NO07G02600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_015058845.1 (PREDICTED: transcription factor E2FB [Solanum pennellii]) HSP 1 Score: 169.5 bits (428), Expect = 2.300e-38 Identity = 99/234 (42.31%), Postives = 135/234 (57.69%), Query Frame = 0 Query: 166 IMSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQD--EQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 + S + SP+ VT P RYDSSLGLLTKKF+ L++ ++ LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G G+ + G E LQ +++ M + ++D E E N R ++VT++D+ LPCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 109 VTSNVGSPSGNNVTPVGP---CRYDSSLGLLTKKFINLIKHAED--GMLDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGQ----------------------------GVSKPGEADESVASLQAEVDKLTIEEHRLDDQIREMQESLRDLSEDENNQRWLFVTEDDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVS 309
BLAST of NO07G02600 vs. NCBI_GenBank
Match: KDP36136.1 (hypothetical protein JCGZ_08780 [Jatropha curcas]) HSP 1 Score: 169.1 bits (427), Expect = 3.000e-38 Identity = 104/231 (45.02%), Postives = 145/231 (62.77%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 +SK+ SP+P T P+ S RYDSSLGLLTKKFV L++ ++ LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G AS G ++S + IE EE G++ ++ R++Q ++ E E + + ++VT+ED+ +PCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 128 VSKIDSPSPLT-----PAGSCRYDSSLGLLTKKFVNLIKHAED--GMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGVDASRPGEPDG-DASLLQAEIEKLSMEERGLD------DQIREMQERLKGF-------------------SEDEISQKWLFVTEEDIKNIPCFQNETLIAIKAPHGTTLEVPDPDEAVEYPQRRYRIILRSTMGPIDVYLVS 325
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_012074348.1 (transcription factor E2FA [Jatropha curcas]) HSP 1 Score: 169.1 bits (427), Expect = 3.000e-38 Identity = 104/231 (45.02%), Postives = 145/231 (62.77%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 +SK+ SP+P T P+ S RYDSSLGLLTKKFV L++ ++ LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G AS G ++S + IE EE G++ ++ R++Q ++ E E + + ++VT+ED+ +PCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 128 VSKIDSPSPLT-----PAGSCRYDSSLGLLTKKFVNLIKHAED--GMLDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGVDASRPGEPDG-DASLLQAEIEKLSMEERGLD------DQIREMQERLKGF-------------------SEDEISQKWLFVTEEDIKNIPCFQNETLIAIKAPHGTTLEVPDPDEAVEYPQRRYRIILRSTMGPIDVYLVS 325
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_022957731.1 (transcription factor E2FB-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 169.1 bits (427), Expect = 3.000e-38 Identity = 104/231 (45.02%), Postives = 139/231 (60.17%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 MS + SP +T P RYDSSLGLLTKKF+ L+ +Q LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G S S N + + +E EE G++ E+ R++Q + E+E N R ++VT+ED+ +LPCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 122 MSNVGSPYANNLTPVGP---CRYDSSLGLLTKKFINLI--KQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSR-SGDVDDNYAGLQAEVENLSMEENGLD------EQIREMQERLRDL-------------------SEEENNQRWLFVTEEDIKELPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVS 321
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_023534187.1 (transcription factor E2FB-like isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 169.1 bits (427), Expect = 3.000e-38 Identity = 104/231 (45.02%), Postives = 139/231 (60.17%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 MS + SP +T P RYDSSLGLLTKKF+ L+ +Q LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G S S N + + +E EE G++ E+ R++Q + E+E N R ++VT+ED+ +LPCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 122 MSNVGSPYANNLTPVGP---CRYDSSLGLLTKKFINLI--KQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSR-SGDVDDNYAGLQAEVENLSMEENGLD------EQIREMQERLRDL-------------------SEEENNQRWLFVTEEDIKELPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVS 321
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_022995081.1 (transcription factor E2FB-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 168.3 bits (425), Expect = 5.200e-38 Identity = 103/231 (44.59%), Postives = 138/231 (59.74%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 MS + SP +T P RYDSSLGLLTKKF+ L+ +Q LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G S N + + +E EE G++ E+ R++Q + E+E N R ++VT+ED+ +LPCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 122 MSNVGSPYANNLTPVGP---CRYDSSLGLLTKKFINLI--KQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGDVDD-NYAGLQAEVENLSMEENGLD------EQIREMQERLRDL-------------------SEEENNQRWLFVTEEDIKELPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVS 321
BLAST of NO07G02600 vs. NCBI_GenBank
Match: ERN16172.1 (hypothetical protein AMTR_s00030p00231260 [Amborella trichopoda]) HSP 1 Score: 167.9 bits (424), Expect = 6.700e-38 Identity = 104/233 (44.64%), Postives = 136/233 (58.37%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQD--EQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 +S SP T+T P + RYDSSLGLLTKKF+ L+ +Q LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G S GE +E+ + LQ +++ M K ++D E E N + +YVT+ED+ LPCF+++T+IAI+AP GTTLEVPDPDE + R++Q+ L ST GP+D+YLV+ Sbjct: 120 ISNAGSPASNTLT---PVGTCRYDSSLGLLTKKFINLI--KQAEDGVLDLNKAAEILEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDVSR----------------PGEVDEDIAV------------LQAEVQNLHLEEHRIDEQIREMQKSLRDLSEDENNQKWLYVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVEYPQRRYQILLRSTMGPIDVYLVS 319
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_011627152.1 (transcription factor E2FA [Amborella trichopoda] >XP_020529414.1 transcription factor E2FA [Amborella trichopoda]) HSP 1 Score: 167.9 bits (424), Expect = 6.700e-38 Identity = 104/233 (44.64%), Postives = 136/233 (58.37%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQD--EQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 +S SP T+T P + RYDSSLGLLTKKF+ L+ +Q LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G S GE +E+ + LQ +++ M K ++D E E N + +YVT+ED+ LPCF+++T+IAI+AP GTTLEVPDPDE + R++Q+ L ST GP+D+YLV+ Sbjct: 120 ISNAGSPASNTLT---PVGTCRYDSSLGLLTKKFINLI--KQAEDGVLDLNKAAEILEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGLDVSR----------------PGEVDEDIAV------------LQAEVQNLHLEEHRIDEQIREMQKSLRDLSEDENNQKWLYVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPDEAVEYPQRRYQILLRSTMGPIDVYLVS 319
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_021635710.1 (LOW QUALITY PROTEIN: transcription factor E2FA [Hevea brasiliensis]) HSP 1 Score: 167.9 bits (424), Expect = 6.700e-38 Identity = 105/231 (45.45%), Postives = 142/231 (61.47%), Query Frame = 0 Query: 167 MSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 +S + SP+P T P+ S RYDSSLGLLTKKFV L+ +Q LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G AS + G ++ S+ IE EE G++ ++ R++Q + E+E N + ++VT+ED+ LPCF ++T+IAI+AP GTTLEVPDP E + R++++ L ST GP+D+YLV+ Sbjct: 135 VSNIDSPSPLT-----PAGSCRYDSSLGLLTKKFVNLI--KQAEDGILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKLKNRIRWKGVDASRPGEADG-DACSLQAEIEKLSMEEHGLD------DQIREMQERLREL-------------------SEEENNQKWLFVTEEDIKSLPCFLNETLIAIKAPHGTTLEVPDPAEAVEYPQRRYRIILRSTMGPIDVYLVS 332
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_012435055.1 (PREDICTED: transcription factor E2FA-like [Gossypium raimondii] >KJB46414.1 hypothetical protein B456_007G366600 [Gossypium raimondii] >KJB46415.1 hypothetical protein B456_007G366600 [Gossypium raimondii]) HSP 1 Score: 167.2 bits (422), Expect = 1.100e-37 Identity = 102/225 (45.33%), Postives = 139/225 (61.78%), Query Frame = 0 Query: 173 PTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 P+P T P+ S RYDSSLGLLTKKFV L++ ++ LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G AS + G + S + IE EE ++ ++ R++Q + E E N +L++VT+ED+ +PCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 147 PSPLT-----PAGSCRYDSSLGLLTKKFVNLMKHAED--GILDLNKAAETLEVQKRRIYDITNVLEGIGLIEKKFKNRIQWKGVGASKPGETDG-DVSVIQEEIENLSMEERRLD------DQIREMQERLRDL-------------------SENENNQKLLFVTEEDIKGIPCFQNETLIAIKAPHGTTLEVPDPDEDVDYRQRRYRIILRSTMGPIDVYLVS 338 The following BLAST results are available for this feature:
BLAST of NO07G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02600 ID=NO07G02600|Name=NO07G02600|organism=Nannochloropsis oceanica|type=gene|length=1290bpback to top protein sequence of NO07G02600.1 >NO07G02600.1-protein ID=NO07G02600.1-protein|Name=NO07G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bpback to top Synonyms
Publications
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