NO07G02600, NO07G02600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02600 vs. NCBI_GenBank
Match: EWM27092.1 (transcription factor e2fb [Nannochloropsis gaditana]) HSP 1 Score: 272.7 bits (696), Expect = 1.900e-69 Identity = 167/231 (72.29%), Postives = 182/231 (78.79%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDEQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVTTP 400 KM SP +V+KAR SPSSRYDSSLGLLTKKFVELLQGQQ RGDSLDLNQAA+ LSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALST SV+R EG E+ RQL+ XXXXXXXXXXXX MT ++Q E EQNT LMYVTQEDLGKLPC++ QTVIAIRAPQGTTLEVPDPDEGM G+R++Q+QL S+NGPVDIYLV P Sbjct: 7 KMTSPV--SVSKARASPSSRYDSSLGLLTKKFVELLQGQQARGDSLDLNQAAVTLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALST-------SVSRHGEGSVH-----------SEDMRQLKXXXXXXXXXXXXXXXXIQSMTALLQQEGEQNTGLMYVTQEDLGKLPCYDAQTVIAIRAPQGTTLEVPDPDEGMANGERRYQIQLVSSNGPVDIYLVNAP 217
BLAST of NO07G02600 vs. NCBI_GenBank
Match: ETI56646.1 (hypothetical protein, variant 2 [Phytophthora parasitica P1569]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: ETI56647.1 (hypothetical protein, variant 3 [Phytophthora parasitica P1569]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: ETI56648.1 (hypothetical protein, variant 4 [Phytophthora parasitica P1569]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_008890481.1 (hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETK96478.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETL49834.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM02903.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETM56132.1 hypothetical protein, variant 2 [Phytophthora parasitica] >ETN24417.1 hypothetical protein, variant 2 [Phytophthora parasitica INRA-310] >ETO85392.1 hypothetical protein, variant 2 [Phytophthora parasitica P1976] >ETP26484.1 hypothetical protein, variant 2 [Phytophthora parasitica CJ01A1] >ETP54481.1 hypothetical protein, variant 2 [Phytophthora parasitica P10297] >KUF89395.1 Transcription factor E2FA [Phytophthora nicotianae]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_008890482.1 (hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETK96479.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETL49835.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM02904.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETM56133.1 hypothetical protein, variant 3 [Phytophthora parasitica] >ETN24418.1 hypothetical protein, variant 3 [Phytophthora parasitica INRA-310] >ETO85393.1 hypothetical protein, variant 3 [Phytophthora parasitica P1976] >ETP26485.1 hypothetical protein, variant 3 [Phytophthora parasitica CJ01A1] >ETP54482.1 hypothetical protein, variant 3 [Phytophthora parasitica P10297]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_008890483.1 (hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETK96480.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETL49836.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM02905.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETM56134.1 hypothetical protein, variant 4 [Phytophthora parasitica] >ETN24419.1 hypothetical protein, variant 4 [Phytophthora parasitica INRA-310] >ETO85394.1 hypothetical protein, variant 4 [Phytophthora parasitica P1976] >ETP26486.1 hypothetical protein, variant 4 [Phytophthora parasitica CJ01A1] >ETP54483.1 hypothetical protein, variant 4 [Phytophthora parasitica P10297]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: KUF77477.1 (Transcription factor E2FA [Phytophthora nicotianae]) HSP 1 Score: 172.9 bits (437), Expect = 2.100e-39 Identity = 107/231 (46.32%), Postives = 140/231 (60.61%), Query Frame = 0 Query: 169 KMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQDE---QEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLV 397 K+ SP+P + ++PSP+SRYDSSLGLLTK+FVEL+Q + LDLN AA L VQKRRIYDITNVLEGIGLIEK SKNNI W+GA+ +T S + + I +EE L+ D + + ++ ++E + YVT +D+ + F Q+V+AI+AP GTTLEVPDPDEGMP G R+FQ+ L ST+GPVD+YLV Sbjct: 46 KLQSPSP-SARGSKPSPASRYDSSLGLLTKRFVELIQAAPSK--DLDLNTAAESLGVQKRRIYDITNVLEGIGLIEKTSKNNIHWKGASGPTGATDSYQGMDHLRQSISDLRQEE---------------LKYDQQ--------IKMVSQNIRRLYEEEAFDKGSFENFCYVTHDDMRRQESFADQSVMAIKAPPGTTLEVPDPDEGMPAGKRRFQIFLKSTDGPVDVYLV 250
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_006362858.1 (PREDICTED: transcription factor E2FB [Solanum tuberosum]) HSP 1 Score: 170.6 bits (431), Expect = 1.000e-38 Identity = 100/234 (42.74%), Postives = 135/234 (57.69%), Query Frame = 0 Query: 166 IMSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQD--EQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 + S + SP+ VT P RYDSSLGLLTKKF+ L++ ++ LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G G+ + G E LQ ++E M + ++D E E N R ++VT++D+ LPCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 108 VTSNVGSPSGNNVTPVGP---CRYDSSLGLLTKKFINLIKHAED--GMLDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGQ----------------------------GVSKPGEADESVASLQAEVEKLTVEEHRLDDQIREMQESLRDLSEDENNQRWLFVTEDDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVS 308
BLAST of NO07G02600 vs. NCBI_GenBank
Match: XP_004251087.1 (PREDICTED: transcription factor E2FB [Solanum lycopersicum]) HSP 1 Score: 169.5 bits (428), Expect = 2.300e-38 Identity = 99/234 (42.31%), Postives = 135/234 (57.69%), Query Frame = 0 Query: 166 IMSKMVSPTPRTVTKARPSPSSRYDSSLGLLTKKFVELLQGQQERGDSLDLNQAAIKLSVQKRRIYDITNVLEGIGLIEKKSKNNIAWRGAAASALSTSSGCNSSSVNRGIEGEEEEEGGIEEGGNCGEEKRQLQRDMEXXXXXXXXXXXXXXXMTKMMQD--EQEQNTRLMYVTQEDLGKLPCFEHQTVIAIRAPQGTTLEVPDPDEGMPEGDRKFQVQLNSTNGPVDIYLVT 398 + S + SP+ VT P RYDSSLGLLTKKF+ L++ ++ LDLN+AA L VQKRRIYDITNVLEGIGLIEKK KN I W+G G+ + G E LQ +++ M + ++D E E N R ++VT++D+ LPCF+++T+IAI+AP GTTLEVPDPDE + R++++ L ST GP+D+YLV+ Sbjct: 109 VTSNVGSPSGNNVTPVGP---CRYDSSLGLLTKKFINLIKHAED--GMLDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGQ----------------------------GVSKPGEADESVASLQAEVDKLTIEEHRLDDQIREMQESLRDLSEDENNQRWLFVTEDDIKSLPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVS 309 The following BLAST results are available for this feature:
BLAST of NO07G02600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02600 ID=NO07G02600|Name=NO07G02600|organism=Nannochloropsis oceanica|type=gene|length=1290bpback to top protein sequence of NO07G02600.1 >NO07G02600.1-protein ID=NO07G02600.1-protein|Name=NO07G02600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=430bpback to top Synonyms
Publications
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