NO07G02570, NO07G02570 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02570 vs. NCBI_GenBank
Match: EWM27109.1 (phytanoyl- dioxygenase family protein [Nannochloropsis gaditana]) HSP 1 Score: 332.0 bits (850), Expect = 1.900e-87 Identity = 159/227 (70.04%), Postives = 185/227 (81.50%), Query Frame = 0 Query: 79 FQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPN-TTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGLMLHRKEMEAMQVNYMRQQQE 305 FQSHL+LPFV AIM++E+IL+QVR++LGPDLLVWFTEWH K P S Y PHQDSTYAGL P EDVVTVWVALT AT+ NGCL+FVPM Y+G QLPH+EEPGD +N LL+GQ I LDF A VEL GEATIHAFRCVHASGPN + +SPRVGLAIRYMKPSV+Q+ G RREGAMLVSG+D++GHFDL P+P EAW GL LH +EMEAM+VNYM +++ Sbjct: 59 FQSHLYLPFVVAIMSTEAILKQVRAVLGPDLLVWFTEWHVKRPASSSKYTPHQDSTYAGLVPAEDVVTVWVALTEATRTNGCLEFVPMTEYHGEQLPHVEEPGDSTNLLLRGQRIASEHLDFTAKAVPVELCPGEATIHAFRCVHASGPNRSDASPRVGLAIRYMKPSVRQMQGGRREGAMLVSGQDDFGHFDLQPLPSEAWDRGGLALHAREMEAMRVNYMESRRK 285
BLAST of NO07G02570 vs. NCBI_GenBank
Match: CEL91712.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 167.9 bits (424), Expect = 4.900e-38 Identity = 102/254 (40.16%), Postives = 146/254 (57.48%), Query Frame = 0 Query: 55 SGAKSFDLENAVRP---LLEG---DSDIRPFQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQR--REGAMLVSG--KDEWGHFDLLPVPCEAWREEGLMLHRKEMEAMQVNY 299 S A++F L + + +LEG D+R F+ HL LP++ ++ +L+ V ++LGPD+L W +E++ K P + ++ HQDSTYAGLEP +DV+T W+AL +ANGC+Q++P + +QLPH+ E D +N L +GQ IP E +A V L+AGE ++H FR VH SGPN T R+G IR++ V L QR RE L G E G+FDL P E E + HR+ M NY Sbjct: 21 SAAEAFTLRHNLEQWEGMLEGGKASKDMR-FRPHLLLPWLWDLVMKPEVLDAVEAVLGPDVLAWSSEFNIKEPHTDSFFSWHQDSTYAGLEPSDDVLTAWIALVDVNEANGCMQYIPGTHH--KQLPHV-ETNDHNNMLSRGQTIPNVV--DESSAVNVVLKAGEMSLHHFRLVHRSGPNKTDDRRIGYTIRFISKRV-ALTTQRKVRESITLCRGVYAPEEGNFDLDVRPDELMGEAEVARHREAMARENANY 267
BLAST of NO07G02570 vs. NCBI_GenBank
Match: WP_015499535.1 (putative phytanoyl-CoA dioxygenase family protein [Octadecabacter antarcticus] >AGI67507.1 putative phytanoyl-CoA dioxygenase family protein [Octadecabacter antarcticus 307]) HSP 1 Score: 154.8 bits (390), Expect = 4.300e-34 Identity = 79/209 (37.80%), Postives = 127/209 (60.77%), Query Frame = 0 Query: 76 IRPFQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGL 285 + F++HL P +A I T +L +ILGPD+L+W +++ KP S + HQDST+AGL+P +D+V +W+ALT + A+GCL+ + ++ QL H + D N L GQ T+D E ++ + L+AGEA++H+ R VH S PN + PR+G+ +R++ PSV+Q + R+ A LV+G D + HFD P+P + + + Sbjct: 53 VHRFKAHLLSPDLARIATHPRVLAVATAILGPDVLLWSSDFFVKPGGSTGYVSWHQDSTHAGLDPTDDIVNLWLALTPSKSASGCLRVI-AGTHDAGQLTHTNKE-DADNMLFFGQ-----TVDVESDSVALPLEAGEASLHSMRIVHGSEPNRSDGPRIGMVLRFIHPSVRQT--KARDSATLVAGVDAFNHFDHEPIPTSHFASDAI 252
BLAST of NO07G02570 vs. NCBI_GenBank
Match: OUT53212.1 (hypothetical protein CBB68_00730 [Rhodospirillaceae bacterium TMED8]) HSP 1 Score: 145.6 bits (366), Expect = 2.600e-31 Identity = 79/196 (40.31%), Postives = 117/196 (59.69%), Query Frame = 0 Query: 80 QSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVP 276 ++HL L ++ ++ ++IL+ V ILG ++L W T + K P + HQD TY GLE P+DV+T W+AL+ TK +GC++ +P R H E D +N L +GQ I + E+ A F+ELQ GE ++H HAS PN T+ R+G+AIRY+ P+V+ LAG E A+L+ G D++GHF L P Sbjct: 54 KTHLLLKWMFDLVNHKNILDNVEDILGENILCWGTSFFIKEPWDGTFVSWHQDITYWGLE-PDDVLTAWLALSPVTKDSGCMRMLPGSHKKPRLEHH--ETSDTANLLTRGQEISSSI--NEDKAFFIELQPGEISLHHGGTAHASAPNMTNDRRIGIAIRYISPNVKSLAGD--ESAILLRGHDDYGHFHLEAAP 242
BLAST of NO07G02570 vs. NCBI_GenBank
Match: PHS08287.1 (phytanoyl-CoA dioxygenase [Acidithiobacillus sp.]) HSP 1 Score: 142.9 bits (359), Expect = 1.700e-30 Identity = 84/209 (40.19%), Postives = 123/209 (58.85%), Query Frame = 0 Query: 79 FQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGLMLH 288 ++SHL P+ +M +IL+ VR+ILG DL+VW T + K P + + HQDS + GL+ + V+TVWVALT T+ NGC++ +P + G Q+ H ++ D +N L +GQ I EE + +VEL+AGEA+IH HAS PN +S RVG+AIRY+ PS +Q + A LVSG+D + HF+ P + + H Sbjct: 52 YKSHLVFPWFNRLMRHPAILDLVRAILGNDLMVWTTHIYPKEPGDGRFVSWHQDSAHWGLD-XDQVLTVWVALTDTTRENGCMRMIPGSHHKG-QVEH-QDTQDANNILTRGQTIQDG--XNEEXSVWVELKAGEASIHHVDMFHASTPNCSSKRRVGVAIRYITPSARQTRID-EDYATLVSGEDRFRHFNEEITPESTMSXDAVXFH 254
BLAST of NO07G02570 vs. NCBI_GenBank
Match: WP_081800685.1 (phytanoyl-CoA dioxygenase [Dongia sp. URHE0060]) HSP 1 Score: 142.1 bits (357), Expect = 2.900e-30 Identity = 87/221 (39.37%), Postives = 123/221 (55.66%), Query Frame = 0 Query: 82 HLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGD---PSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGLMLHRKE-MEAMQVNY 299 HL L +A ++ +IL+QV S+LGP++L W +++ +K P HQDSTY GL P D+VT WVA T +T +GCL+ VP QLPH GD N L +GQ I +D E +A V LQ G+ ++H R +H S PN R+G AIRY+ V+Q +G R+ A LV G D++GHFD P P + + + H K + A ++ Y Sbjct: 67 HLLLTGLADLVRHPTILDQVESVLGPNILCWASDFFSKSPDDGMRVTWHQDSTYWGLSKP-DIVTAWVAFTPSTVESGCLRVVPGSHLKD-QLPH----GDTFAADNMLSRGQEI-SVKVD-ERDAVDVVLQPGQMSLHHVRLIHGSEPNRAPHRRIGFAIRYLPTYVRQASGM-RDTATLVRGSDDYGHFDHEPAPASDFHPDAVAFHAKSYVNATEILY 278
BLAST of NO07G02570 vs. NCBI_GenBank
Match: PHS05652.1 (phytanoyl-CoA dioxygenase [Acidithiobacillus sp.]) HSP 1 Score: 142.1 bits (357), Expect = 2.900e-30 Identity = 82/192 (42.71%), Postives = 119/192 (61.98%), Query Frame = 0 Query: 79 FQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFD 271 ++SHL P+ +M +IL+ VR+ILG DL+VW T + K P + + HQDS + GL+ + V+TVWVALT T+ NGC++ +P + G Q+ H ++ D +N L +GQ I EE + +VEL+AGEA+IH HAS PN +S RVG+AIRY+ PS +Q + A LVSG+D + HF+ Sbjct: 52 YKSHLVFPWFNRLMRHPAILDLVRAILGNDLMVWTTHIYPKEPGDGRFVSWHQDSAHWGLD-SDQVLTVWVALTDTTRENGCMRMIPGSHHKG-QVEH-QDTQDANNILTRGQTIQDGI--NEEKSVWVELKAGEASIHHVDMFHASTPNCSSKRRVGVAIRYITPSARQTRID-EDYATLVSGEDRFRHFN 237
BLAST of NO07G02570 vs. NCBI_GenBank
Match: WP_039538979.1 (phytanoyl-CoA dioxygenase [Ruegeria sp. ANG-R] >KIC41323.1 phytanoyl-CoA dioxygenase [Ruegeria sp. ANG-R]) HSP 1 Score: 141.7 bits (356), Expect = 3.700e-30 Identity = 89/262 (33.97%), Postives = 135/262 (51.53%), Query Frame = 0 Query: 45 PAARVPSSSPSGAKSFDLENAVRPLLEGDSDI-----RPFQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGLMLHRKEMEAMQVNYMRQ 302 P P+S +G ++ +LE E D + + +H+ +P I +L+ V +LGPDLL+W E K P + + HQD TY G+ D +T W+AL+ AT +GC+ FV N LPH + D +N L +GQ + A EE+ +ELQ G+ ++H +H SGPN ++ R+GLAIRY+ P+ QQ R+ A+L G+D G+F +P P E + + L LH + + A Q M Q Sbjct: 28 PIPVFPASETAGFRA-ELEEIEANWREADLPLPLNMYKRINAHVVMPLATRIALDSRVLDVVEGVLGPDLLLWSAELFIKEPRTTQVVGMHQDLTYWGMGETSDQLTAWIALSPATVQSGCMDFVKASHKN-PILPHNDTFSD-NNLLSRGQEV--AVDVNEEDKTHIELQPGQMSLHHGLTIHGSGPNVSADRRIGLAIRYLNPNAQQKVAD-RDYAILARGEDRVGNFIHIPTPTELFSPDALDLHAR-IRADQAKAMAQ 282
BLAST of NO07G02570 vs. NCBI_GenBank
Match: WP_010441706.1 (phytanoyl-CoA dioxygenase [Ruegeria conchae]) HSP 1 Score: 141.4 bits (355), Expect = 4.900e-30 Identity = 88/260 (33.85%), Postives = 133/260 (51.15%), Query Frame = 0 Query: 49 VPSSSPSGAKSF--DLENAVRPLLEGDSDI-----RPFQSHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGLMLHRKEMEAMQVNYMRQ 302 +P S + A F +LE+ E D + + +H+ +P I +L+ V +LGPDLL+W E K P + + HQD TY G+ D +T W+AL+ AT +GC+ FV N LPH + D +N L +GQ + D E+ +ELQ G+ ++H +H SGPN + R+GLAIRY+ P+ QQ R+ A+L G+D G+F +P P E + ++ L LH + + A Q M Q Sbjct: 29 IPVFSAAEAAGFRAELEDVEANWREADLPLPLNMYKRINAHVVMPLATRISLDPRVLDVVEGVLGPDLLLWSAELFIKEPRTTQVVGMHQDLTYWGMGETSDQLTAWIALSPATVESGCMDFVKASHKN-PILPHNDTFSD-NNLLSRGQEVAVDVAD--EDKTHIELQPGQMSLHHGLTIHGSGPNASDDRRIGLAIRYLNPNAQQKVAD-RDYAILARGEDRVGNFIHIPAPKELFAQDALDLHAR-IRADQAKAMAQ 282
BLAST of NO07G02570 vs. NCBI_GenBank
Match: WP_050603227.1 (phytanoyl-CoA dioxygenase family protein [Ruegeria sp. 6PALISEP08]) HSP 1 Score: 141.4 bits (355), Expect = 4.900e-30 Identity = 79/212 (37.26%), Postives = 115/212 (54.25%), Query Frame = 0 Query: 81 SHLFLPFVAAIMTSESILEQVRSILGPDLLVWFTEWHTKPPLSKKGYAPHQDSTYAGLEPPEDVVTVWVALTAATKANGCLQFVPMRRYNGRQLPHIEEPGDPSNALLKGQYIPRATLDFEENAEFVELQAGEATIHAFRCVHASGPNTTSSPRVGLAIRYMKPSVQQLAGQRREGAMLVSGKDEWGHFDLLPVPCEAWREEGLMLHRKEME 293 +H+ +P V+ I +L+ V +LGPDLL+W E K P + + HQD TY G+ D VT W+AL+ AT +GC+ FV N LPH + D +N L +GQ + D E+ +ELQ G+ ++H +H SGPNT+ R+GLAIRY+ P+ QQ R+ A+L G+D G+F + P E + L LH + E Sbjct: 68 AHVVMPLVSRIALDPRVLDVVEGVLGPDLLLWSAELFIKEPRTTQVVGMHQDLTYWGMGETPDQVTAWIALSPATVTSGCMDFVKGSHKN-PILPHNDTFSD-NNLLSRGQEVAVDVAD--EDKTHIELQPGQMSLHHGLTIHGSGPNTSDDRRIGLAIRYLNPNAQQKVAD-RDYAVLARGEDRVGNFIHIDTPTELFSTPALELHARIQE 274 The following BLAST results are available for this feature:
BLAST of NO07G02570 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02570 ID=NO07G02570|Name=NO07G02570|organism=Nannochloropsis oceanica|type=gene|length=933bpback to top protein sequence of NO07G02570.1 >NO07G02570.1-protein ID=NO07G02570.1-protein|Name=NO07G02570.1|organism=Nannochloropsis oceanica|type=polypeptide|length=311bpback to top Synonyms
Publications
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