NO07G02550, NO07G02550 (gene) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO07G02550
Unique Name	NO07G02550
Type	gene
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3509
Alignment location	chr7:740145..743653 -

Link to JBrowse

Properties


Property Name	Value
Description	Ccaat enhancer-binding protein zeta

Mutants

Expression

Analysis:

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr7	genome	chr7:740145..743653 -

Analyses

This gene is derived from or has results from the following analyses


Analysis Name	Date Performed
GSE178672	2023-12-15
PRJNA933693	2023-10-26
PRJNA943449	2023-07-19
GSE149904	2020-10-10
NoIMET1_WT_HS	2020-09-29
GSE139615	2020-03-11
PRJNA241382	2020-03-11
BLASTP analysis of N. oceanica IMET1 genes	2019-07-11
InterPro analysis for N. oceanica IMET1 genes	2019-07-11
GO annotation for IMET1v2 genes	2019-07-10
PRJNA182180	2019-04-25
Gene prediction for N. oceanica IMET1	2017-10-24

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR005612	CCAAT-binding_factor

Vocabulary: **Biological Process**
Term	Definition
GO:0042254	ribosome biogenesis

Homology

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: EWM27094.1 (ccaat enhancer-binding protein zeta [Nannochloropsis gaditana])

HSP 1 Score: 843.6 bits (2178), Expect = 7.100e-241
Identity = 522/814 (64.13%), Postives = 590/814 (72.48%), Query Frame = 0

Query:   52 PQSYASPTGGTAGAELLLASHEHKQECWWDLEASLRNDIKSKDKKKREYKKKGGSEPAAADRADPTNIITSTVGLKTASVALKEGEAVLTAAHNLFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALASKSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAF--GEDMPEVEEG-SGEXXXXXXXXXXXXGRKTRKGQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPKLGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRP-VNTAEFLLLGAHELKPDQLFFHKFFKAKAERNRKAYAAGAGKKAGLDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFADGLAEELMRSGGQGKVDFSDEDP 862
            P    SP  GT GAELLLA  + K E WW +EA L +  K KD KK+     GG +  A  +   T +   T+G+ T  V ++EGEAVLTAA  L+E +R+RKLDQDQKWTEK+LRQGTLSDKVAA+TL++QEAPLFRLRT+DALLALA K+DRRC+QMA+EAL+DLLEHNLLPPERKLV WA QDE+SLP  ++ ++EQQARREACLA+R+FEDQLKQRV++L+  LEKATHDTV +FKRFA++ VA LLQ RPEQEERLL ILVNKLGD EKK APHAAYLLRRLLAAHP MK VVAREVQQ LHRPNLQPR LYNGI+FL QLYL K  D  LA+ LVQTY SLFDRALK+GG+LS KMLSALL+GV+RA PYLD  GL  GPL  HLED+FRTVHQ SFKTAVQALM                 LA   +G+   +   +EGRFYR LY K++ P  L TAHP LFLNLLYKAMKADRD ARVAAFAKRLLS GA QG PAL AG+LFLLSEV   QP LR+AL RRAS +EG+ED+FDP KREPSFAF  GE     EEG  GEX              ++K Q HLWEV LL LHFHPSV+ FA+S+L   A+HRVTY+GDPLQDFSTMAFLDRFA+KNPKL  ++TAAA                                  GG E   P VN+AEFL L  HEL PDQLFFHKFF+ KA R+    AAG         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      FADGLA+ LMRS  QGKVDFSDEDP
Sbjct:   57 PPPATSPQAGTLGAELLLAIRDRKAENWWQMEAILCDQSK-KDTKKQSQSXXGGKKALAEAKGALTPL---TLGVNTIKVHIQEGEAVLTAAQTLYEVRRSRKLDQDQKWTEKILRQGTLSDKVAALTLLVQEAPLFRLRTLDALLALAQKADRRCAQMAIEALQDLLEHNLLPPERKLVPWARQDEASLPPAAAGDSEQQARREACLALRFFEDQLKQRVAVLIDRLEKATHDTVTSFKRFALTGVAGLLQGRPEQEERLLSILVNKLGDAEKKVAPHAAYLLRRLLAAHPAMKGVVAREVQQFLHRPNLQPRPLYNGISFLGQLYLRKGSDTDLALGLVQTYLSLFDRALKTGGELSEKMLSALLSGVHRATPYLDAGGLAEGPLGAHLEDIFRTVHQASFKTAVQALML----------------LAQVATGTGRRSEGRLEGRFYRGLYEKVRDPAFLITAHPTLFLNLLYKAMKADRDQARVAAFAKRLLSHGALQGPPALAAGVLFLLSEVGASQPVLREALVRRASTQEGEEDSFDPGKREPSFAFGGGEGGRVDEEGDEGEXGGAAKEVTSNGSGLSKKSQPHLWEVGLLALHFHPSVQRFAASVLDPRARHRVTYSGDPLQDFSTMAFLDRFAFKNPKL-RERTAAA-----MEGEALTEAEREDRLSRFGAGTRRAAGVRGGRESGPPAVNSAEFLSLEPHELSPDQLFFHKFFREKAARDXXXXAAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEREIDAFADGLAQSLMRS--QGKVDFSDEDP 842

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: CBN74888.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 380.9 bits (977), Expect = 1.300e-101
Identity = 279/775 (36.00%), Postives = 346/775 (44.65%), Query Frame = 0

Query:  130 SVALKEGEAVLTAAHNLFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALASKSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREA----------------------CLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRA-------------------------------LKSGGDLSGKMLSALLTGVNRAYPYL--DDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPG----------------LASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDE------------------------------------------------------DAFDPSKREPSFAFGEDMPEVEEGSGEXXXXXXXXXXXXGRKTRKGQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPKLGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAERNR 780
            S A   G+A+L A    + AQR R    D KW  +VLR GTLSDKVAA+TL +QE+P+ RL  +D LL L  K +RR +QMA+EALKDL   NLLP  RKLV   F+    L A +S   E    +                         L + Y+EDQ+  R   LVG +E  + DTVENFKRF++ A  +LL+ +PE E RLL +LVNKLGD ++K +    +LL+RLLA HP MK VV REVQQ LHRP LQP+ +Y GI FL+Q+YL+  +D  +A  LVQTY  LF+ A                                   G    K+LSALLTGVNRA PYL   D G+ G         LFR  H G F T  QAL                 G                 A     +    G ++  RFY ALY KL   +L   ++PVLFLNL+YKA+KAD ++AR AAFAKRLL   A   +P   AG LF++SE +K  P LR +L   A                                                               +DPSKR+P FAF         G G                   G   LWE  LLR H HPSV  FA SL+S +  H V Y GDPL D + M FL+R AYKNPK    K                                         E    VN   F+      +  DQ+FFH FF+ KA R+R
Sbjct:  232 SQARAAGKALLEAEVAAWTAQRERHASGDDKWVAQVLRGGTLSDKVAALTLQVQESPVHRLAVLDGLLDLGLKKERRTAQMALEALKDLFITNLLPDSRKLV--PFETRPLLQALASVTEEGNKGQGGGGDSVPGGGRGVNSPGGKAAGKALLMWYYEDQILNRFYRLVGAIEAGSRDTVENFKRFSLEAAKDLLEAKPEGEGRLLALLVNKLGDPDRKISSKVIHLLQRLLAKHPAMKGVVVREVQQYLHRPGLQPKAVYAGIIFLNQVYLTAGEDGAIASTLVQTYLRLFEGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGGSGAKLLSALLTGVNRARPYLPPGDPGVEG-----RTASLFRVAHTGGFATTTQALSLLFQVVSAAPANKPAAGSDKKPAANGKPIAAAAAAHGELAAGGEGGANISARFYAALYAKLLSSDLGGASNPVLFLNLVYKAIKADTEEARAAAFAKRLLQVTAVCDAPLAAAG-LFVVSEALKKHPDLRRSLFENARPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGMSIPGYDPSKRDPRFAFA--------GGG------------------GGVQPLWEASLLRSHVHPSVSRFADSLVSKQQNHAVQYKGDPLADLALMPFLNRMAYKNPKARDDKNQGRGMRRVKPPVG---------------------------EADAAVNDDAFITQPKESVSADQVFFHNFFREKATRDR 945

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_013878104.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X1 [Austrofundulus limnaeus])

HSP 1 Score: 340.9 bits (873), Expect = 1.500e-89
Identity = 259/720 (35.97%), Postives = 362/720 (50.28%), Query Frame = 0

Query:   99 EYKKKGGSEPAAADRADPTNIITSTVGLKTASVALKEGEAVLTAAHNLFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDED----AFDPSKREPSFAFGEDMPEVEEGS----GEXXXXXXXXXXXXGRKTRKG--------------QAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPK-LGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAERNRKAYAAGAGKKAGLDD 795
            EY  +G SEP      DP  ++ S    +T +  L E E       +L+  ++  +   +  W + V+  G L+D++AAMT+++Q+AP+  L  ++ L+ L S K  RR   MA++ L+DLL  NLLP  RKL  +A      L   +  N + + RR   L + YFED+LK   +  V  L     DTV   +  A+S+  +LL  RPEQE  LLG +VNKLGD   K A  A++LL  LL  HP MKA V  EV++LL RPNL  +  Y  + FL+Q+ LS ++++GLA +L+  YFS F   +K+ G +  KMLSALL+GVNRAYPY   +G     +   LE LFR VH   F TAVQALM                 L   +  S      S+  RFY  LY KL  P L  ++   LFLNLLYK+MK+D    RV AF KRLL  GA Q +P+ T G LFL+SEV+K +P L+  L + A V E +ED    + D S  E  F    D    E+GS    G+            GR++ +                A LWE+  L  +FHPSV  FA +LL  ++   + Y+GDPLQDF+ + FLDRF ++NPK L  K+   +                                         PVN  EFL     +++ D++FFH+FFK + +  +       G    ++D
Sbjct:  180 EYASEGSSEP-----QDP--VLVSR--YQTLAQQLFESEV------DLYRTKKNMQKGANSAWMKTVVSSGVLADRMAAMTVLVQDAPVHSLDHVETLVTLVSKKGGRRTGLMALDTLRDLLLSNLLPEHRKLRPFAQHPFQDLEERAGGNRDARDRR---LVLWYFEDRLKGLAARFVEALSATARDTVPAVRTKALSSAYQLLSERPEQERALLGQVVNKLGDPAYKMAAKASHLLELLLRRHPNMKAAVCEEVERLLFRPNLGAKARYYAVCFLNQVVLS-HEESGLAARLLALYFSFFQTCIKT-GSVESKMLSALLSGVNRAYPY---AGAGDQKVKEQLETLFRVVHLARFNTAVQALM-----------------LLFQVLDSQQ----SLSDRFYVTLYRKLLDPGLSGSSRQNLFLNLLYKSMKSDVAPRRVRAFIKRLLQVGAEQ-NPSFTCGALFLVSEVLKAKPGLK-VLLQEAGVGEDEEDFKDLSEDMSDEEEKFV---DADRTEDGSGPAGGKPTASWVHHQNLEGRRSSQNYDPLHRNPLFCGADHASLWELHRLAQNFHPSVALFAKTLLQGDS---IQYSGDPLQDFTLIRFLDRFVFRNPKQLKGKQNTDSVVLRPKQRTPVNPL---------------------------PVNCPEFLSRDESQIRVDEIFFHRFFKKRQQEKQSRQPRRDGDNESVED 820

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_013878105.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X2 [Austrofundulus limnaeus])

HSP 1 Score: 340.9 bits (873), Expect = 1.500e-89
Identity = 259/720 (35.97%), Postives = 362/720 (50.28%), Query Frame = 0

Query:   99 EYKKKGGSEPAAADRADPTNIITSTVGLKTASVALKEGEAVLTAAHNLFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDED----AFDPSKREPSFAFGEDMPEVEEGS----GEXXXXXXXXXXXXGRKTRKG--------------QAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPK-LGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAERNRKAYAAGAGKKAGLDD 795
            EY  +G SEP      DP  ++ S    +T +  L E E       +L+  ++  +   +  W + V+  G L+D++AAMT+++Q+AP+  L  ++ L+ L S K  RR   MA++ L+DLL  NLLP  RKL  +A      L   +  N + + RR   L + YFED+LK   +  V  L     DTV   +  A+S+  +LL  RPEQE  LLG +VNKLGD   K A  A++LL  LL  HP MKA V  EV++LL RPNL  +  Y  + FL+Q+ LS ++++GLA +L+  YFS F   +K+ G +  KMLSALL+GVNRAYPY   +G     +   LE LFR VH   F TAVQALM                 L   +  S      S+  RFY  LY KL  P L  ++   LFLNLLYK+MK+D    RV AF KRLL  GA Q +P+ T G LFL+SEV+K +P L+  L + A V E +ED    + D S  E  F    D    E+GS    G+            GR++ +                A LWE+  L  +FHPSV  FA +LL  ++   + Y+GDPLQDF+ + FLDRF ++NPK L  K+   +                                         PVN  EFL     +++ D++FFH+FFK + +  +       G    ++D
Sbjct:  180 EYASEGSSEP-----QDP--VLVSR--YQTLAQQLFESEV------DLYRTKKNMQKGANSAWMKTVVSSGVLADRMAAMTVLVQDAPVHSLDHVETLVTLVSKKGGRRTGLMALDTLRDLLLSNLLPEHRKLRPFAQHPFQDLEERAGGNRDARDRR---LVLWYFEDRLKGLAARFVEALSATARDTVPAVRTKALSSAYQLLSERPEQERALLGQVVNKLGDPAYKMAAKASHLLELLLRRHPNMKAAVCEEVERLLFRPNLGAKARYYAVCFLNQVVLS-HEESGLAARLLALYFSFFQTCIKT-GSVESKMLSALLSGVNRAYPY---AGAGDQKVKEQLETLFRVVHLARFNTAVQALM-----------------LLFQVLDSQQ----SLSDRFYVTLYRKLLDPGLSGSSRQNLFLNLLYKSMKSDVAPRRVRAFIKRLLQVGAEQ-NPSFTCGALFLVSEVLKAKPGLK-VLLQEAGVGEDEEDFKDLSEDMSDEEEKFV---DADRTEDGSGPAGGKPTASWVHHQNLEGRRSSQNYDPLHRNPLFCGADHASLWELHRLAQNFHPSVALFAKTLLQGDS---IQYSGDPLQDFTLIRFLDRFVFRNPKQLKGKQNTDSVVLRPKQRTPVNPL---------------------------PVNCPEFLSRDESQIRVDEIFFHRFFKKRQQEKQSRQPRRDGDNESVED 820

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_023203216.1 (CCAAT/enhancer-binding protein zeta [Xiphophorus maculatus])

HSP 1 Score: 332.4 bits (851), Expect = 5.300e-87
Identity = 242/653 (37.06%), Postives = 329/653 (50.38%), Query Frame = 0

Query:  146 LFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAFGEDMPE---VEEGSGEXXXXXXXXXXXXGRKTRK-------------GQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPK--LGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAERNR 780
            L+  ++  +   +  W + V+  G L+D++AAMT+++Q+AP+  L  ++ L+++   K  RR   MA++ +++LL  +LLP  RKL  +A +    L   +S N + + RR   L + YFE QLKQ+V+  V  L++  HDTV   K  A++   ELL  RPEQE  LL  +VNKLGD + K A  AA+LL  LL  HP MKAVV  EV++L+ RPN+  +  Y  + FL Q+ LS +D+A LA +L+  YFS F   +K   D+  KMLSALLTGVNRAYPY D        +   L+ LFR VH   F TAVQALM                 L   +  +      SV  RFY ALY KL  P L ++    LFLNLL+KA+KAD    RV AFAKRLL   A QG+    AG LFL+SEVMK QP LR  L                                   E  +              GR ++               ++ LWE+  L LHFHPSV  FA ++L  E    V Y+GDPLQDF+ + FLDRF ++NPK   G + T +A                                 +  L G  PVN AEFL     ++  DQ+FFH+FFK + +  +
Sbjct:  197 LYRTKKNMQRGANSAWMKTVVSTGALADRMAAMTVLVQDAPVHMLEHVETLVSMVKRKGSRRMGLMALDTIRELLLSDLLPEHRKLRPFAQRPFDQLEERASGNRDARDRR---LILWYFEHQLKQQVAQFVAALDEVGHDTVGATKVKALTTAHELLSSRPEQERALLVQVVNKLGDPDYKMATKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLS-HDEAPLAAKLIAVYFSFFGACVKK-KDVESKMLSALLTGVNRAYPYADAG---DEKVREQLDTLFRVVHMAKFNTAVQALM-----------------LLFQVLDAQQ----SVSDRFYVALYRKLLDPGLAASPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGA-CFAAGALFLISEVMKAQPGLRMLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAEPATRPTASWVHHQNLEGGRSSQNYDPVHRNPLFCGADRSPLWELHRLSLHFHPSVSLFAKTVLQGEP---VQYSGDPLQDFTLIRFLDRFVFRNPKQLRGKQNTDSA----------------------------ALRPKQRFLVGSLPVNGAEFLSRDESQIPVDQVFFHRFFKKRQQEKQ 788

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_007578509.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X2 [Poecilia formosa])

HSP 1 Score: 329.3 bits (843), Expect = 4.500e-86
Identity = 244/654 (37.31%), Postives = 327/654 (50.00%), Query Frame = 0

Query:  146 LFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAFG------EDMPE---VEEGSGEXXXXXXXXXXXXGRKTRK-------------GQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPK--LGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAK 775
            L+  ++  +   +  W + V+  G L+D++AAMTL++Q+AP+  L  ++ L+++   K  RR   MA++ L++LL  +LLP  RKL  +A +    L   +S N + + RR   L + YFE QLKQ+V+  V  L++  HDTV   K  A++A  ELL  RPEQE  LL  +VNKLGD + K A  AA+LL  LL  HP MKAVV  EV++L+ RPN+  +  Y  + FL Q+ LS +D+A LA +L+  YFS F   +K   D+  KMLSALLTGVNRAYPY D        +   L+ LFR VH   F TAVQALM                 L   +  +      SV  RFY ALY KL  P L +     LFLNLL+KA+KAD    RV AFAKRLL   A QG+    AG LFL+SE+MK +P LR  L +                               D PE    E  +              GR ++               ++ LWE+  L LHFHPSV  FA ++L  E    V Y GDPLQDF+ + FLDRF ++NPK   G + T +A                                      G  PVN  EFL     ++  DQ+FFH+FFK +
Sbjct:  197 LYRTKKNLQRGANSAWMKTVVSSGALADRMAAMTLLVQDAPVHMLEHVETLVSMVKRKGSRRMGLMALDTLRELLLSDLLPEHRKLRPFAQRPFDQLEERASGNRDARDRR---LILWYFEHQLKQQVAEFVAALDEVGHDTVAATKAKALAAAHELLSGRPEQERALLVQVVNKLGDPDYKMAAKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLS-HDEAPLAAKLIAVYFSFFGACVKK-KDVESKMLSALLTGVNRAYPYADAG---DEKVREQLDTLFRVVHLAKFNTAVQALM-----------------LLFQVLDAQQ----SVSDRFYVALYRKLLDPGLAAAPRQNLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGA-CFAAGALFLVSELMKAKPGLRMLLQQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXLADKPEGGVAEPATRPTASWVHHQNLEGGRSSQNYDPVHRNPLFCGADRSPLWELHRLSLHFHPSVSLFARTVLQGEP---VQYTGDPLQDFTLIRFLDRFVFRNPKQLRGKQNTDSAALRPKQRFPV----------------------------GSLPVNGVEFLSRDESQIPVDQVFFHRFFKKR 789

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_014829300.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X3 [Poecilia mexicana])

HSP 1 Score: 329.3 bits (843), Expect = 4.500e-86
Identity = 244/656 (37.20%), Postives = 328/656 (50.00%), Query Frame = 0

Query:  146 LFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAFG------EDMPE---VEEGSGEXXXXXXXXXXXXGRKTRK-------------GQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPK--LGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAE 777
            L+  ++  +   +  W + V+  G L+D++AAMTL++Q+AP+  L  ++ L+++   K  RR   MA++ L++LL  +LLP  RKL  +A +    L   +S N + + RR   L + YFE QLKQ+V+  V  L++  HDTV   K  A++A  ELL  RPEQE  LL  +VNKLGD + K A  AA+LL  LL  HP MKAVV  EV++L+ RPN+  +  Y  + FL Q+ LS +D+A LA +L+  YFS F   +K   D+  KMLSALLTGVNRAYPY D        +   L+ LFR VH   F TAVQALM                 L   +  +      SV  RFY ALY KL  P L +     LFLNLL+KA+KAD    RV AFAKRLL   A QG+    AG LFL+SE+MK +P LR  L +                               D PE    E  +              GR ++               ++ LWE+  L LHFHPSV  FA ++L  E    V Y GDPLQDF+ + FLDRF ++NPK   G + T +A                                      G  PVN  EFL     ++  DQ+FFH+FFK + +
Sbjct:  197 LYRTKKNLQRGANSAWMKTVVSSGALADRMAAMTLLVQDAPVHMLEHVETLVSMVKRKGSRRMGLMALDTLRELLLSDLLPEHRKLRPFAQRPFDQLEERASGNRDARDRR---LILWYFEHQLKQQVAEFVAALDEVGHDTVAATKAKALAAAHELLSGRPEQERALLVQVVNKLGDPDYKMAAKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLS-HDEAPLAAKLIAVYFSFFGACVKK-KDVESKMLSALLTGVNRAYPYADAG---DEKVREQLDTLFRVVHLAKFNTAVQALM-----------------LLFQVLDAQQ----SVSDRFYVALYRKLLDPGLAAAPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGA-CFAAGALFLVSELMKAKPGLRMLLQQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXLADKPEGGVAEPETRPTASWVHHQNLEGGRSSQNYDPVHRNPLFCGADRSPLWELHRLSLHFHPSVSLFARTVLQGEP---VQYTGDPLQDFTLIRFLDRFVFRNPKQLRGKQNTDSAALRPKQRFPV----------------------------GSLPVNGVEFLSRDESQIPVDQVFFHRFFKKRQQ 791

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_016519819.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X1 [Poecilia formosa])

HSP 1 Score: 329.3 bits (843), Expect = 4.500e-86
Identity = 242/652 (37.12%), Postives = 324/652 (49.69%), Query Frame = 0

Query:  146 LFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAFG------EDMPE---VEEGSGEXXXXXXXXXXXXGRKTRK-------------GQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPKLGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAK 775
            L+  ++  +   +  W + V+  G L+D++AAMTL++Q+AP+  L  ++ L+++   K  RR   MA++ L++LL  +LLP  RKL  +A +    L   +S N + + RR   L + YFE QLKQ+V+  V  L++  HDTV   K  A++A  ELL  RPEQE  LL  +VNKLGD + K A  AA+LL  LL  HP MKAVV  EV++L+ RPN+  +  Y  + FL Q+ LS +D+A LA +L+  YFS F   +K   D+  KMLSALLTGVNRAYPY D        +   L+ LFR VH   F TAVQALM                 L   +  +      SV  RFY ALY KL  P L +     LFLNLL+KA+KAD    RV AFAKRLL   A QG+    AG LFL+SE+MK +P LR  L +                               D PE    E  +              GR ++               ++ LWE+  L LHFHPSV  FA ++L  E    V Y GDPLQDF+ + FLDRF ++NPK    K                                     +    G  PVN  EFL     ++  DQ+FFH+FFK +
Sbjct:  197 LYRTKKNLQRGANSAWMKTVVSSGALADRMAAMTLLVQDAPVHMLEHVETLVSMVKRKGSRRMGLMALDTLRELLLSDLLPEHRKLRPFAQRPFDQLEERASGNRDARDRR---LILWYFEHQLKQQVAEFVAALDEVGHDTVAATKAKALAAAHELLSGRPEQERALLVQVVNKLGDPDYKMAAKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLS-HDEAPLAAKLIAVYFSFFGACVKK-KDVESKMLSALLTGVNRAYPYADAG---DEKVREQLDTLFRVVHLAKFNTAVQALM-----------------LLFQVLDAQQ----SVSDRFYVALYRKLLDPGLAAAPRQNLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGA-CFAAGALFLVSELMKAKPGLRMLLQQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXLADKPEGGVAEPATRPTASWVHHQNLEGGRSSQNYDPVHRNPLFCGADRSPLWELHRLSLHFHPSVSLFARTVLQGEP---VQYTGDPLQDFTLIRFLDRFVFRNPKQLRGKRENPGSALQLLPDPGSVLIQFPVCLSENTDSAALRPKQRFPVGSLPVNGVEFLSRDESQIPVDQVFFHRFFKKR 815

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_014829297.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X1 [Poecilia mexicana])

HSP 1 Score: 328.9 bits (842), Expect = 5.900e-86
Identity = 242/654 (37.00%), Postives = 325/654 (49.69%), Query Frame = 0

Query:  146 LFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAFG------EDMPE---VEEGSGEXXXXXXXXXXXXGRKTRK-------------GQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPKLGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAE 777
            L+  ++  +   +  W + V+  G L+D++AAMTL++Q+AP+  L  ++ L+++   K  RR   MA++ L++LL  +LLP  RKL  +A +    L   +S N + + RR   L + YFE QLKQ+V+  V  L++  HDTV   K  A++A  ELL  RPEQE  LL  +VNKLGD + K A  AA+LL  LL  HP MKAVV  EV++L+ RPN+  +  Y  + FL Q+ LS +D+A LA +L+  YFS F   +K   D+  KMLSALLTGVNRAYPY D        +   L+ LFR VH   F TAVQALM                 L   +  +      SV  RFY ALY KL  P L +     LFLNLL+KA+KAD    RV AFAKRLL   A QG+    AG LFL+SE+MK +P LR  L +                               D PE    E  +              GR ++               ++ LWE+  L LHFHPSV  FA ++L  E    V Y GDPLQDF+ + FLDRF ++NPK    K                                     +    G  PVN  EFL     ++  DQ+FFH+FFK + +
Sbjct:  197 LYRTKKNLQRGANSAWMKTVVSSGALADRMAAMTLLVQDAPVHMLEHVETLVSMVKRKGSRRMGLMALDTLRELLLSDLLPEHRKLRPFAQRPFDQLEERASGNRDARDRR---LILWYFEHQLKQQVAEFVAALDEVGHDTVAATKAKALAAAHELLSGRPEQERALLVQVVNKLGDPDYKMAAKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLS-HDEAPLAAKLIAVYFSFFGACVKK-KDVESKMLSALLTGVNRAYPYADAG---DEKVREQLDTLFRVVHLAKFNTAVQALM-----------------LLFQVLDAQQ----SVSDRFYVALYRKLLDPGLAAAPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGA-CFAAGALFLVSELMKAKPGLRMLLQQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXLADKPEGGVAEPETRPTASWVHHQNLEGGRSSQNYDPVHRNPLFCGADRSPLWELHRLSLHFHPSVSLFARTVLQGEP---VQYTGDPLQDFTLIRFLDRFVFRNPKQLRGKRENPGSALQLLPDPGSVLIQFPVCLSENTDSAALRPKQRFPVGSLPVNGVEFLSRDESQIPVDQVFFHRFFKKRQQ 817

[Close]

BLAST of NO07G02550 vs. NCBI_GenBank
Match: XP_014829298.1 (PREDICTED: CCAAT/enhancer-binding protein zeta isoform X2 [Poecilia mexicana])

HSP 1 Score: 328.9 bits (842), Expect = 5.900e-86
Identity = 242/654 (37.00%), Postives = 325/654 (49.69%), Query Frame = 0

Query:  146 LFEAQRARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALAS-KSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTEQQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAELLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVAREVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFDRALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVHQGSFKTAVQALMXXXXXXXXXXXXXXXPGLASNISGSSSSNGFSVEGRFYRALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGATQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREPSFAFG------EDMPE---VEEGSGEXXXXXXXXXXXXGRKTRK-------------GQAHLWEVPLLRLHFHPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPKLGAKKTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGGLEGRRPVNTAEFLLLGAHELKPDQLFFHKFFKAKAE 777
            L+  ++  +   +  W + V+  G L+D++AAMTL++Q+AP+  L  ++ L+++   K  RR   MA++ L++LL  +LLP  RKL  +A +    L   +S N + + RR   L + YFE QLKQ+V+  V  L++  HDTV   K  A++A  ELL  RPEQE  LL  +VNKLGD + K A  AA+LL  LL  HP MKAVV  EV++L+ RPN+  +  Y  + FL Q+ LS +D+A LA +L+  YFS F   +K   D+  KMLSALLTGVNRAYPY D        +   L+ LFR VH   F TAVQALM                 L   +  +      SV  RFY ALY KL  P L +     LFLNLL+KA+KAD    RV AFAKRLL   A QG+    AG LFL+SE+MK +P LR  L +                               D PE    E  +              GR ++               ++ LWE+  L LHFHPSV  FA ++L  E    V Y GDPLQDF+ + FLDRF ++NPK    K                                     +    G  PVN  EFL     ++  DQ+FFH+FFK + +
Sbjct:  197 LYRTKKNLQRGANSAWMKTVVSSGALADRMAAMTLLVQDAPVHMLEHVETLVSMVKRKGSRRMGLMALDTLRELLLSDLLPEHRKLRPFAQRPFDQLEERASGNRDARDRR---LILWYFEHQLKQQVAEFVAALDEVGHDTVAATKAKALAAAHELLSGRPEQERALLVQVVNKLGDPDYKMAAKAAHLLETLLHNHPNMKAVVCCEVERLMFRPNVGAKAQYYAVCFLSQVMLS-HDEAPLAAKLIAVYFSFFGACVKK-KDVESKMLSALLTGVNRAYPYADAG---DEKVREQLDTLFRVVHLAKFNTAVQALM-----------------LLFQVLDAQQ----SVSDRFYVALYRKLLDPGLAAAPRQSLFLNLLFKALKADVAPRRVKAFAKRLLQVAAQQGA-CFAAGALFLVSELMKAKPGLRMLLQQGEXXXXXXXXXXXXXXXXXXXXXXXXXXXLADKPEGGVAEPETRPTASWVHHQNLEGGRSSQNYDPVHRNPLFCGADRSPLWELHRLSLHFHPSVSLFARTVLQGEP---VQYTGDPLQDFTLIRFLDRFVFRNPKQLRGKRENPGSALQLLPDPGSVLIQFPVCLSENTDSAALRPKQRFPVGSLPVNGVEFLSRDESQIPVDQVFFHRFFKKRQQ 817

The following BLAST results are available for this feature:

BLAST of NO07G02550 vs. NCBI_GenBank

BLAST of NO07G02550 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20


Match Name	E-value	Identity	Description
EWM27094.1	7.100e-241	64.13	ccaat enhancer-binding protein zeta [Nannochlorops...	[more]
CBN74888.1	1.300e-101	36.00	conserved unknown protein [Ectocarpus siliculosus]	[more]
XP_013878104.1	1.500e-89	35.97	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]
XP_013878105.1	1.500e-89	35.97	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]
XP_023203216.1	5.300e-87	37.06	CCAAT/enhancer-binding protein zeta [Xiphophorus m...	[more]
XP_007578509.1	4.500e-86	37.31	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]
XP_014829300.1	4.500e-86	37.20	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]
XP_016519819.1	4.500e-86	37.12	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]
XP_014829297.1	5.900e-86	37.00	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]
XP_014829298.1	5.900e-86	37.00	PREDICTED: CCAAT/enhancer-binding protein zeta iso...	[more]

Pages

Relationships

This gene is member of the following syntenic_region feature(s):


Feature Name	Unique Name	Species	Type
nonsL100	nonsL100	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR072	ncniR072	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ncniR071	ncniR071	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region
ngnoR130	ngnoR130	Nannochloropsis oceanica (N. oceanica IMET1)	syntenic_region

This gene is orthologous to the following gene feature(s):


Feature Name	Unique Name	Species	Type
NSK000604	NSK000604	Nannochloropsis salina (N. salina CCMP1776)	gene

The following polypeptide feature(s) derives from this gene:


Feature Name	Unique Name	Species	Type
NO07G02550.1	NO07G02550.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following gene feature(s) are orthologous to this gene:


Feature Name	Unique Name	Species	Type
jgi.p\|Nanoce1779_2\|332898	gene_2585	Nannochloropsis oceanica (N. oceanica CCMP1779)	gene
Naga_100046g6	gene3432	Nannochloropsis gaditana (N. gaditana B-31)	gene

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Species	Type
NO07G02550.1	NO07G02550.1	Nannochloropsis oceanica (N. oceanica IMET1)	mRNA

Sequences

The following sequences are available for this feature:

gene sequence
protein sequence

gene sequence

>NO07G02550 ID=NO07G02550|Name=NO07G02550|organism=Nannochloropsis oceanica|type=gene|length=3509bp
AATACACAGGCGTTAGGTTCAACCAGTTCTGGTATTCTACTGACCGCAAA
CGCGCGCCTGGTTTTAAGATATTCTTCGACCTCCCCACCCGATGCCTCCT
CCTCCTCAGCACCGGTCCAAGACCAGTGGCCACAGCCACAAGGCGACCAA
TAATCGGCGGCGCCCGCAGCGGGAGCGACACCAGCAGGGGCAGCAGAAGC
AGGGACATTATTCTCCTTCCCACTATAAGCTGCAACATACCACTCCCCAG
TCCTACGCCTCCCCCACGGGGGGCACGGCCGGGGCGGAGCTGCTGCTCGC
GTCACATGAACATAAACAAGAGTGCTGGTGGGACTTGGAAGCCAGCTTGC
GGAACGATATCAAGTCCAAGGACAAGAAGAAGAGGGAATACAAAAAAAAG
GGTGGCTCTGAACCCGCCGCTGCCGACCGTGCGGATCCCACCAATATCAT
CACCAGCACCGTGGGCCTGAAGACGGCGAGCGTCGCGCTTAAAGAAGGGG
AGGCCGTGCTGACGGCCGCACATAATTTGTTTGAAGCCCAGCGCGCCCGG
AAATTAGACCAGGATCAGAAGTGGACGGAGAAAGTCCTAAGGCAAGGAAC
GCTGTCCGATAAGGTCGCAGCCATGACTCTCATGATCCAAGAAGCGCCTC
TCTTCCGCCTCCGGACCATCGATGCCCTCCTAGCTCTGGCTTCCAAGTCC
GACCGTCGGTGTAGCCAAATGGCGATGGAGGCCTTAAAAGACTTGTTGGA
GCATAATTTGCTCCCGCCCGAACGAAAATTGGTAGCTTGGGCATTTCAGG
ATGAGTCTTCCTTGCCAGCTTTCTCCAGTGAGAACACCGAGCAACAGGCT
CGACGGGAGGCCTGCTTGGCGATTCGCTATTTTGAAGACCAGTTAAAGCA
GCGCGTGTCGTTACTAGTGGGGATGTTGGAGAAAGCGACGCACGATACGG
TTGAGAATTTTAAGCGGTTCGCAATGAGTGCCGTAGCGGAGCTTCTCCAG
TTTCGTCCGGAGCAGGAGGAAAGGTTGTTGGGTATATTGGTGAATAAATT
GGGGGATATTGAAAAGAAGGCTGCACCGCATGCTGCCTATCTGCTGAGGC
GTTTGTTGGCCGCGCATCCTGTGATGAAGGCAGTGGTGGCGAGGGAGGTT
CAACAGCTCCTGCATCGACCAAATCTGCAGCCGCGGGGGTTGTACAATGG
GATTACCTTTTTGGATCAGCTATACTTGAGCAAGAATGACGACGCGGGAT
TGGCGATGCAGCTGGTGCAGACGTATTTTAGTTTGTTCGATCGGGCCTTG
AAGTCGGGTGGAGATTTGAGTGGGAAGATGCTGTCTGCGTTGCTGACGGG
CGTGAATCGCGCATATCCCTATTTGGACGATTCCGGGTTGGTGGGAGGGC
CGCTGGCACCTCATCTTGAGGACTTGTTTCGGACGGTTCACCAGGGTAGT
TTTAAGACGGCGGTACAGGCGTTGATGCTTCTGCATCAGGTAGTGGCGGG
GGGAGGGGGGGGAAAGAAGGCTCCGGGTCTTGCTTCCAACATAAGCGGCA
GCAGCAGTAGCAATGGTTTTAGTGTTGAGGGCAGGTTTTATCGTGCTTTG
TACGGAAAACTTAAGGTGCCTGAGCTGTTGAGCACGGCACATCCGGTGCT
GTTTCTCAATCTGCTTTACAAGGCCATGAAGGCCGATAGGGACGATGCCC
GCGTGGCGGCTTTCGCGAAGCGCCTCTTGTCTTTTGGAGCTACCCAAGGC
TCCCCTGCCCTTACTGCTGGCATCCTCTTTTTGCTCTCGGAAGTTATGAA
AGGCCAGCCCTCATTAAGGGACGCATTAACGAGGCGAGCCTCTGTGGAGG
AAGGGGATGAGGACGCGTTTGACCCGTCAAAGCGTGAGCCAAGTTTTGCA
TTTGGCGAGGACATGCCGGAGGTGGAGGAGGGGTCGGGAGAGAACGGGCA
ACCACAGCAGCAGCAGCAGCAGCAGTTAGGGAGGAAAACGAGGAAGGGCC
AAGCACATTTGTGGGAAGTGCCCTTGCTTCGACTGCATTTTCACCCTTCG
GTAAAGCATTTTGCGAGCTCATTGTTATCCGCCGAGGCGAAGCATAGGGT
CACGTATGCTGGAGATCCGCTGCAAGACTTTTCGACCATGGCCTTCCTCG
ATCGATTCGCCTACAAAAATCCCAAATTGGGCGCCAAGAAAACGGCTGCG
GCGGAGAGTGAAGGCCCGACGGAGGAAGAAGAGGAGGTGCGCAGGAGTCG
GTTAGGAGCAGGAGCAGGAGCAGCCAGGCATGCGGCGATGGCGGCTGCTG
CGGAGGGAGGTCTGGAGGGAAGGCGGCCGGTGAACACGGCAGAGTTTCTC
TTGTTGGGTGCGCATGAGCTGAAGCCGGATCAGCTGTTCTTTCATAAGTT
TTTCAAGGCGAAGGCAGAGAGGAATAGGAAGGCGTATGCTGCTGGAGCAG
GGAAGAAGGCAGGTTTAGATGATGATGCAGGGTCGGATTCGGAAGACGAA
GATGACGAGGCAGCGGAGGAAGGAGAAGAGGAGGACGACGAAGAGGACGA
GAGTGAGAATGAAAGTGGGAGTGACGCGGAAGAGAGGGAGATCGATGAAT
TTGCTGATGGCCTGGCAGAGGAATTGATGCGCAGTGGCGGGCAAGGGAAG
GTGGACTTCAGTGATGAAGACCCCGATATGGAGGGATGGGATGAAGTAGA
GGACGGAACGCAAAACGAAGAAGAGGATGAGGAGGAAAGGGGAGAGAGAA
AAAGAGGAGAAGGGAAAGATGATGATGCGTTTTTGGATGATGTGAGTGAT
GAGTCGGGGATGGGAGAGGAGGAGGGGATGCTGAAAGACGAGGACAGCGA
GGAGGATGAGGAGAAGGAGAAAGAGGAGGAAGAGGAGGAGGAGGAGGAGA
AGGAGGAGGAGGAGGAAAAGGAGGAGGACGAGGAGGAGGAGGAGGATCGG
TTGCCCGTATGGGCTATGGATGAGGAGGAGGATGATGATGATGACGATGC
GGTGTTGGCAGCGGAACATAAGGCCAAGACCAATAAGCGCCAGCGTGGGC
ATGATATCGAGGGGGGAAAGGAGGGGGAGGAGGGAGAGGAGGAGCAAGAA
GAGGATGAGGAGAGGGAAGAGGATGAGGAGGAAGAGGAGGAGGAGGAAGA
GGATGAGGAGGTACAAAGGTCCGCCACGGCCAAGGGAAAGAAGAAGAAGG
CGAAGAGGGTCAGCTTTGCGGGTATGTCCACGTTTGCCTCTTTTGATGAT
TACGCGGCTTTAATCGAGGAGGATGACCGCAAGCGTCAGACAGAGGAAAA
TGCAGCGATGGGGGCGGCACGGATCGCGGGGACGACGACAAACTCTGTTG
CGAGGAAAAGGACCAAGGCTGGTGGCGGAAAGAATAAGAAGCATAACTTA
AAGCGAATGAAGAAATGATCGACTGGATCATTTGAATGATAAAAGAGAAA
GCTGATATATGCGGACTAGCTATGAACAAGCAGATGGAAGTAAATGAAAG
CAAAGAATC

protein sequence of NO07G02550.1

>NO07G02550.1-protein ID=NO07G02550.1-protein|Name=NO07G02550.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1109bp
MPPPPQHRSKTSGHSHKATNNRRRPQRERHQQGQQKQGHYSPSHYKLQHT
TPQSYASPTGGTAGAELLLASHEHKQECWWDLEASLRNDIKSKDKKKREY
KKKGGSEPAAADRADPTNIITSTVGLKTASVALKEGEAVLTAAHNLFEAQ
RARKLDQDQKWTEKVLRQGTLSDKVAAMTLMIQEAPLFRLRTIDALLALA
SKSDRRCSQMAMEALKDLLEHNLLPPERKLVAWAFQDESSLPAFSSENTE
QQARREACLAIRYFEDQLKQRVSLLVGMLEKATHDTVENFKRFAMSAVAE
LLQFRPEQEERLLGILVNKLGDIEKKAAPHAAYLLRRLLAAHPVMKAVVA
REVQQLLHRPNLQPRGLYNGITFLDQLYLSKNDDAGLAMQLVQTYFSLFD
RALKSGGDLSGKMLSALLTGVNRAYPYLDDSGLVGGPLAPHLEDLFRTVH
QGSFKTAVQALMLLHQVVAGGGGGKKAPGLASNISGSSSSNGFSVEGRFY
RALYGKLKVPELLSTAHPVLFLNLLYKAMKADRDDARVAAFAKRLLSFGA
TQGSPALTAGILFLLSEVMKGQPSLRDALTRRASVEEGDEDAFDPSKREP
SFAFGEDMPEVEEGSGENGQPQQQQQQQLGRKTRKGQAHLWEVPLLRLHF
HPSVKHFASSLLSAEAKHRVTYAGDPLQDFSTMAFLDRFAYKNPKLGAKK
TAAAESEGPTEEEEEVRRSRLGAGAGAARHAAMAAAAEGGLEGRRPVNTA
EFLLLGAHELKPDQLFFHKFFKAKAERNRKAYAAGAGKKAGLDDDAGSDS
EDEDDEAAEEGEEEDDEEDESENESGSDAEEREIDEFADGLAEELMRSGG
QGKVDFSDEDPDMEGWDEVEDGTQNEEEDEEERGERKRGEGKDDDAFLDD
VSDESGMGEEEGMLKDEDSEEDEEKEKEEEEEEEEEKEEEEEKEEDEEEE
EDRLPVWAMDEEEDDDDDDAVLAAEHKAKTNKRQRGHDIEGGKEGEEGEE
EQEEDEEREEDEEEEEEEEEDEEVQRSATAKGKKKKAKRVSFAGMSTFAS
FDDYAALIEEDDRKRQTEENAAMGAARIAGTTTNSVARKRTKAGGGKNKK
HNLKRMKK*

Synonyms

Publications