NO07G02510, NO07G02510 (gene) Nannochloropsis oceanica

Overview
NameNO07G02510
Unique NameNO07G02510
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1664
Alignment locationchr7:726772..728435 +

Link to JBrowse

Properties
Property NameValue
DescriptionFAD-dependent oxidoreductase family protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:726772..728435 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
GO:0016491oxidoreductase activity
Vocabulary: INTERPRO
TermDefinition
IPR006076FAD-dep_OxRdtase
Homology
BLAST of NO07G02510 vs. NCBI_GenBank
Match: XP_005855788.1 (hypothetical protein NGA_2083600 [Nannochloropsis gaditana CCMP526] >EKU20574.1 hypothetical protein NGA_2083600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 466.5 bits (1199), Expect = 1.100e-127
Identity = 260/471 (55.20%), Postives = 320/471 (67.94%), Query Frame = 0
Query:   25 LLACSCLIFCSTMARPSAFLLSLPSRSHRPLLARLFASSVPNKSERLKLNIAIVGGGLSGLSTAWHLAGRVQRLTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQCKANNPGHGLLLRNSIVLSMPDYLRGLWLSLQ-QTHGNTTMLTWEQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAGICSFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWG-----QVAKVKGGEEKE----EKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLLPFQVRAPL 486
            L+A   L +C       + LL     S    L++   SS P  S    L +A+VGGGL+GLSTAWHL G V++++I+D   PGQA ASAVAGGLLHPLTPKNR++W GL GFEAT RLV +SK AL N GD A A RL S+PG ILRPAL  QHV+++QAAA +LP WLKWL GEEW+ K   PGHGLLLR S +LSMPDYLRGLWLS Q +   ++T LTWE   F+ A  +K        A YDV+VLASGAGI +FP L+HLP+E V GRTLLV  E +      E  +  SL  ALLCGEYVVPGVD     D    ERRVLRCGST+EY++D W       V K+ G   +E    EK + ++ +LR KAE IYPPL++ P AYR+T+GTRVAT RS+LG++PI+GR+    ++    EG + ETWL+TGLGGRG++HH FLG  LA+AIL GDET LP +VRAPL
Sbjct:    9 LIATLFLFYCFKPDMAHSLLLHGLRGSLPVCLSKSLLSSKPEPS---NLKVAVVGGGLAGLSTAWHLTGLVKQVSIFDPRPPGQAEASAVAGGLLHPLTPKNRLLWCGLRGFEATSRLVVSSKTALSNYGDTAGASRLQSAPGAILRPALTSQHVIDFQAAAKRLPNWLKWLNGEEWEQKVGVPGHGLLLRQSAILSMPDYLRGLWLSSQARAERSSTALTWESSLFT-ADCVKQ-----SGAKYDVVVLASGAGIRAFPELEHLPVEFVRGRTLLVADESKGGVEPSEQESAPSLQCALLCGEYVVPGVDTEMCSDAEGKERRVLRCGSTREYLRDSWHVQDGIGVGKMGGRRTEEWFQSEKNDGEIASLRRKAESIYPPLRQGPEAYRVTSGTRVATRRSNLGKLPIVGRL----EQTKVAEGIKAETWLFTGLGGRGVVHHGFLGECLAQAILTGDETHLPSEVRAPL 466          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: EWM27099.1 (FAD dependent oxidoreductase [Nannochloropsis gaditana])

HSP 1 Score: 465.3 bits (1196), Expect = 2.300e-127
Identity = 260/471 (55.20%), Postives = 319/471 (67.73%), Query Frame = 0
Query:   25 LLACSCLIFCSTMARPSAFLLSLPSRSHRPLLARLFASSVPNKSERLKLNIAIVGGGLSGLSTAWHLAGRVQRLTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQCKANNPGHGLLLRNSIVLSMPDYLRGLWLSLQ-QTHGNTTMLTWEQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAGICSFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWG-----QVAKVKGGEEKE----EKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLLPFQVRAPL 486
            L+A   L +C       + LL     S    L++   SS P  S    L +A+VGGGL+GLSTAWHL G V++++I+D   PGQA ASAVAGGLLHPLTPKNR++W GL GFEAT RLV +SK AL N GD A A RL S+PG ILRPAL  QHV+++QAAA +LP WLKWL GEEW+ K   PGHGLLLR S +LSMPDYLRGLWLS Q +   + T LTWE   F+ A  +K        A YDV+VLASGAGI +FP L+HLP+E V GRTLLV  E +      E  +  SL  ALLCGEYVVPGVD     D    ERRVLRCGST+EY++D W       V K+ G   +E    EK + ++ +LR KAE IYPPL++ P AYR+T+GTRVAT RS+LG++PI+GR+    ++    EG + ETWL+TGLGGRG++HH FLG  LA+AIL GDET LP +VRAPL
Sbjct:    9 LIATLFLFYCFKPDMAHSLLLHGLRGSLPVCLSKSLLSSKPEPS---NLKVAVVGGGLAGLSTAWHLTGLVKQVSIFDPRPPGQAEASAVAGGLLHPLTPKNRLLWCGLRGFEATSRLVVSSKTALSNYGDTAGASRLQSAPGAILRPALTSQHVIDFQAAAKRLPNWLKWLNGEEWEQKVGVPGHGLLLRQSAILSMPDYLRGLWLSSQARAERSYTALTWESSLFT-ADCVKQ-----SGAKYDVVVLASGAGIRAFPELEHLPVEFVRGRTLLVADESKGGVEPSEQESAPSLQCALLCGEYVVPGVDTEMCSDAEGKERRVLRCGSTREYLRDSWHVQDGIGVGKMGGRRTEEWFQSEKNDGEIASLRRKAESIYPPLRQGPEAYRVTSGTRVATRRSNLGKLPIVGRL----EQTKVAEGIKAETWLFTGLGGRGVVHHGFLGECLAQAILTGDETHLPSEVRAPL 466          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: GAX20490.1 (hypothetical protein FisN_24Hu260 [Fistulifera solaris])

HSP 1 Score: 158.3 bits (399), Expect = 6.100e-35
Identity = 121/410 (29.51%), Postives = 191/410 (46.59%), Query Frame = 0
Query:   75 IAIVGGGLSGLSTAWHLAGR---VQRLTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQCKANNPGHGLLLRNSI-VLSMPDYLRGLWLSLQQTHGNTT-MLTWEQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAGI--CSFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLL 478
            I ++GGG++GL+  +HL  +      + ++D    GQ  ASAVAGGLLHPL+P+ ++++ GLEG   T  L++ + +A++                 ++R A         Q  A  +P   +W+  +E Q    +   GL+L+N   V+ +P YL+GLW + +Q    T   LTW   T +   AI            D+IV  +G+G+   +  +    P++LV G++L++                 +   ALLCG+Y+ P  D  R           L  GST E+  D                  E+ ++ L+E+   + P L   P   +IT GTRV + R   GR+PI+G++      G K+       W+ TGL  RGL++HA  G  LA+AIL G E  L
Sbjct:   28 ITVIGGGMAGLAVTYHLLSQGRPPHSIQVFDKAPVGQGGASAVAGGLLHPLSPRGKLVYKGLEGLYETNLLLQTTASAVVK--------------DRLVRVATTESQARMLQTTAQTIPHICEWIAADEMQRICPSEYGGLMLQNGCKVVDVPAYLKGLWNACEQLAQETNCQLTW---TVTEHAAIDED---------DIIVYTAGSGLFQSNLLSASTFPMQLVHGQSLVL--------------RNNNFQDALLCGKYISPLNDHSR-----------LLVGSTHEFRDDLLSP--------------EQVIQELKERTSAVAPHLWEDPVVEKITKGTRVQSERGTHGRLPIVGKL-----PGTKQH------WVLTGLSSRGLLYHALYGKMLAKAILQGSEDCL 361          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: GAX13514.1 (hypothetical protein FisN_27Lu010 [Fistulifera solaris])

HSP 1 Score: 158.3 bits (399), Expect = 6.100e-35
Identity = 120/412 (29.13%), Postives = 191/412 (46.36%), Query Frame = 0
Query:   75 IAIVGGGLSGLSTAWHL--AGRVQRLTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQ--CKANNPGHGLLLRNSI-VLSMPDYLRGLWLSLQQ-THGNTTMLTWEQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAGIC---SFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLL 478
            I+++GGG++GL+  +HL   G   R+ ++D    G   ASAVAGGLLHPL+P+ ++++ G++G   T  L+  +  A++                 + R A      + +Q  A K+P   +W+   E Q  C+++    GL+L+N   V+ +P YL+GLW + +         LTW               +NA     D+IV  +G+G+    S  +    P++LV G++L++     +           +L  ALLCG+Y+ P  D             ++  GST E+  D                  EE +  LRE+   + P L       +IT GTRV + R   GR+PI+G++      G K+       W+ TGL  RGL++HA  G  LA+AIL G E  L
Sbjct:   17 ISVIGGGMAGLAVTYHLLSQGPPSRIQVFDKAPVGNGGASAVAGGLLHPLSPRGKLVYRGIKGLYETNALLRVTVPAIVK--------------DRLYRVATTEAQAITFQLTAQKIPRICEWIAANEMQRICQSDTVYGGLVLQNGCKVVDVPAYLKGLWSACEHLAQEKNCQLTWT------------VTENAAINQDDIIVYTAGSGLFEPNSLLSAPTFPMQLVHGQSLVIRCNNNN-----------NLKDALLCGKYISPLKD-----------PSLVLVGSTHEFRDDLLSP--------------EEVIHELRERTSAVAPHLWEDYIVEKITKGTRVQSERGKHGRLPIVGKL-----PGNKQR------WVLTGLSSRGLLYHALYGKMLAKAILQGSEDCL 355          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: XP_002183273.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC44973.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 156.4 bits (394), Expect = 2.300e-34
Identity = 133/464 (28.66%), Postives = 224/464 (48.28%), Query Frame = 0
Query:   36 TMARPSAFLLSLPSRSHRPLL---ARLFASSVPNKSERLKLNIAIVGGGLSGLSTAWHL-----AGRVQRLTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQCKANNPGHGLLL------RNSIVLSMPDYLRGLWLSLQQTHGNTTM-LTW------EQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAGIC-SFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLL 478
            T++R   F ++L +   R ++   AR       + +      +A++GGGL+GLST +HL     +GR   + ++D    G A ASAVAGGLLHPL+P+ +++  G+EG +AT  L++ ++ +  + G    +  L +    + R A+ P +V   Q  A  LPE  +W++         + G   +L          V+  P YL  LW + +       + ++W      +  T S   A K++ K+     +D +V+++G+G+  +F  L  LPI+LV G++L         E R  S A  S  +ALLCG+YV P            A++  +  G+T E+ ++       VKG           +  L+ + E + P L  +    R+T G RV + R   GR+PI+GR+ +   E           W+++GL  RGL++H   G  LA A+L G+E+L+
Sbjct:    2 TISRGPNFCVALTTVRQRAVVQTRARTKTKMALDSALSTPQRVAVIGGGLAGLSTTYHLLEKMPSGRHLSVEVFDKGLVGTAGASAVAGGLLHPLSPRGKLVHLGMEGLQATNYLLDKAQRSSADVGCTPESVVLRNE---LYRVAMTPNNVKQLQTTAQTLPELCEWVDSGTDLSGLFSEGDNSVLGALRMYNGCKVIHPPSYLSSLWAACESLADEKELSVSWNIIHGDDGFTESTLSAWKNRLKD-----FDAVVVSAGSGMFGTFLPLASLPIQLVRGQSL---------EMRIPSDAQWS-KNALLCGKYVSP-----------LADKDTVLVGATHEFQEN----ALNVKG----------VLAELKIRTEGMVPKLWEQGVIQRMTVGYRVQSERGRHGRLPIVGRIPMPFAEALHR-----NAWVFSGLSSRGLLYHGIFGEALAGAVLQGNESLI 417          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: CEM09670.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 156.4 bits (394), Expect = 2.300e-34
Identity = 131/395 (33.16%), Postives = 180/395 (45.57%), Query Frame = 0
Query:   98 LTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKW-------LEGEEWQCKANNPGHGLLLRNSIVLSMPDYLRGLWLSLQQTHGNTTMLTWEQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAGICSFPALKHL----PIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLLPFQV 482
            L I D    GQ  ASAVA GLLHP +PK  IIW G E  E T  L+   +  L    D A++     S  ++ RP +  Q+   Y+ A  K P+ ++W       L   E Q KA     G+L+++ + +    +LRGLW  +    G T   +W + +  +   ++        AA+DV+ L +G G+     +  L     +  V G+TL     E D  GRE       L +ALLCGE+VVP  D +               G+TKEY +D           E            L  K +RIY PL   P     T+G RV +PR+  GR+P  GRV       G + G     WL T LG RGL+   +LG  LAEAIL  DET+LP +V
Sbjct:    7 LEIIDEAGVGQGGASAVAAGLLHPFSPKCGIIWRGEECLEVTKELIREVQGFL----DGASSHETVVSCDSLFRPIVTEQNEEIYRKAVEKRPDLVQWATLKDGRLMQREQQDKAEGGSDGILIKDGLAVDTIVFLRGLWKLICSRDGATR--SWRRMSVRSLSTLRELD-----AAFDVVCLCNGVGMRYINGMAGLLDGSSLSFVRGQTL-----EYDTSGRE-------LHAALLCGEWVVPRHDGK------------AIGGATKEYSQDDLDAPPDAAKAE----------ALLAPKLKRIYAPLSDLPVT-GCTSGVRVLSPRTHHGRIPTAGRVKHLPSGEGDDAGLN-NVWLMTALGARGLLWAPWLGRCLAEAILSQDETILPDEV 354          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: OEU09495.1 (nucleotide-binding domain-containing protein [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 147.1 bits (370), Expect = 1.400e-31
Identity = 122/415 (29.40%), Postives = 198/415 (47.71%), Query Frame = 0
Query:   75 IAIVGGGLSGLSTAWHLAGR--VQRLTIYDSM-APGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQCKANNPGHGLLLRNSIVLSMPDYLRGLWLSLQQTHGNT----TMLTWEQ----CTFSNAQAIKHKKKNAGAAAYDVIVLASGAGICSFPAL---KHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDET 476
            + I+GGGL+GLSTA+HL  +     +TI+D    PG   ASAVAGGLLHPL P+ ++ W+GLEG     +LV A+        ++   R        I R A+    V  +Q  A +LPE+  WL+       ++      L  +  VL M  Y++GLW S Q     T    T+   E+     T +N    + + K+     +D ++ A+G+G+    +L   +  PI LV G+++ +   + D +  +       L +A++CG+YV P ++          + RVL  GST E+ ++P      +   E ++E        L+ ++      +       RIT+ TRV + R   GR+PI+G++        K+      +W++TGL GRGL++H   G  L   IL  + T
Sbjct:   21 VGIIGGGLAGLSTAYHLLEKNPSTDITIFDQYPTPGIGGASAVAGGLLHPLNPRGKLAWNGLEGLALANKLVNAA----CEFENDVVLR------NKIYRIAMNEDQVTKFQTTANQLPEFATWLDQPSSNSSSSADDALKLSGDCKVLHMKSYMKGLWSSCQSIGTGTKEWITLPEQEEKEDIGTSNNNIEWEERLKD-----FDTVIFAAGSGLFQTSSLLEKEEFPIHLVGGQSIEMTMNDGDDDDDK------ILWNAIICGKYVSPMIE----------KNRVL-IGSTHEFKEEP------MTPNEVEDE--------LKTRSYHFASGVWDNGTIDRITSATRVQSNRGPYGRLPIVGKL--------KDCRHHPNSWIFTGLSGRGLLYHGLFGHNLVNMILEENTT 381          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: XP_002288540.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED93976.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 137.5 bits (345), Expect = 1.100e-28
Identity = 117/431 (27.15%), Postives = 178/431 (41.30%), Query Frame = 0
Query:   75 IAIVGGGLSGLSTAWHLAGRVQR---------LTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDEAAARRLHSSPGTILRP-----ALIPQHVLNYQAAAAKLPEWLKWLEGE--EWQCKANNPGHGLLLRNSIVLSMPDYLRGLWLSLQQTHGNTTMLTWEQCTFSNAQAIKHKKKNAGAAAYDVIVLASGAG------ICSFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYP---PLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLLPFQ 481
            I I+GGGL+GLS A+HL    ++         + IYD    G+  AS+VAGGL HP +P+ ++I  GLE  + + RLV+ +               +   P  ++RP     AL   +V   Q  A K PE   WL  +  +    A   G   L     V+ +P YL+GLW   ++                                   ++LA+GAG      IC+      LP++LV G+++ +  +  DK+         +   A+LCG+Y  P   L    D T  + +    G+T E++ +                   E  + + E  +R YP    L       RITTG R+ + R   GR+PI+G+                  W++TGL  RGLI+H   G  LAEA+   +E  L  Q
Sbjct:  110 IGIIGGGLAGLSVAYHLLDISEKNTENSDPLHIVIYDKAKVGEGGASSVAGGLQHPFSPRGKLIHFGLEALQCSNRLVQVA---------------MKHQPSCLIRPHLYRIALSDANVKQLQDTATKYPELATWLPKKVLDNLLGAETMGGVKLGNGCQVIHVPTYLKGLWEECERKATEINGSITXXXXXXXXXXXXXXXXXXXXXXXXAVILAAGAGLLQDGLICNNHHEDGLPVQLVRGQSIEMTLQFSDKD-------IIASNEAMLCGKYTSPLPALNEATDETAKQSKRFVIGATHEFMSE-----------------ALETSQVVDELKKRSYPFASNLWDHGEIDRITTGVRMQSNRGKFGRMPIIGKFITAKNPDVDRRVASDRLWIFTGLSSRGLIYHGLFGRMLAEAVSHDNEVTLQQQ 501          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: CBJ26082.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 134.0 bits (336), Expect = 1.200e-27
Identity = 123/438 (28.08%), Postives = 186/438 (42.47%), Query Frame = 0
Query:   85 LSTAWHLAGRVQRLTIYDSMAPGQAS-ASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLN-----AGDEAA---ARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQCKANNPGH------GLLLRNSIVLSMPDYLRGLWLSL----------QQTHGNTTMLTWEQCTFSNA---------QAIKHKKKNAGAAAYDVIVLASGAGICSFPALKHLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCG---EYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLLPFQVRAPL 486
            ++ A+HLA     +T++D    G  S AS+VA GLLHPLTP+ ++IW G EGFEA   L++     L++     AGD+A+     R   +  ++ RP +  + V  +  AA  LP+W++ L  EE       PG       G+ +R ++ +  P YL+GLW +           +   G            S +         Q+++     A +  ++ +V   GAG+ +   +K    ++V+ R  +V    +     E  AAG   G  +L G   E  +PG  + R  D  KA                                     +R LR K  R +P L+        T G RV   RS  GR+P+ GR+    K G          W+   LG RGLIHHA+LG  +A   L+  +  LP QV APL
Sbjct:    1 MAAAYHLAAFGSDVTVFDPHEAGTGSGASSVAAGLLHPLTPRGKLIWKGEEGFEAAKHLIQTVNDKLVDDAAAAAGDDASPANGPRGCLTTNSVYRPLMDEKQVDLFTKAAEDLPQWVESLTREE--IMEAVPGSTPECLGGVRIRGALAVDAPTYLKGLWSACRALVNAADADRNASGGXXXXXXXXXXXSPSRKEGATWVRQSVEDVHALAASGEFNAVVACVGAGVKALAGVK----DIVSLRLYVVPTTVD-----ETGAAGGGNGDKILLGSTQEPFMPGQKVDRPPDMAKA-------------------------------------LRQLRPKVARFFPALE-GVTPVGCTAGVRVMQERSSYGRIPVAGRLPF-SKRG----------WVIAALGARGLIHHAYLGKLVAACALLDSDDCLPPQVVAPL 378          
BLAST of NO07G02510 vs. NCBI_GenBank
Match: XP_024359298.1 (uncharacterized protein LOC112274237 isoform X1 [Physcomitrella patens])

HSP 1 Score: 120.9 bits (302), Expect = 1.100e-23
Identity = 129/453 (28.48%), Postives = 197/453 (43.49%), Query Frame = 0
Query:   61 ASSVPNKSERLKL------NIAIVGGGLSGLSTAWHLAGRVQ----------RLTIYDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAALLNAGDE--AAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEEWQC------KANNP-------GHGLLLRNSIVLSMPDYLRGLWLSLQQTHGNTTMLTWEQCTFSNAQAIKHKKKNAGAAA---YDVIVLASGAGICSFPALK-HLPIELVTGRTLLVDQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLRCGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRPAAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGLGGRGLIHHAFLGAKLAEAILMGDETLLP 479
            ASS P+ S    +        A+VG G +G+S AWHL  R +           + ++D    G   AS V+GGLLHP TPK + +W G +G++A L L++ ++AA+   G+    A RR       ILRP +  +H+ +    A KL         E  +C      KA  P       G GL + + I L    YL  LWL+      N        C  + A  +K    +    +   Y+ +V+ +G+     P L   LP+ +  G  ++ D E   +     S A   L  A L     V G              R +  G+TK +   P  +  +V   EE   + E     L ++A + YP ++R      +  G R   PR+ LG +P+ G ++    E  K    E + WL  GLG RGL++H  LG ++A A+  GDE+L+P
Sbjct:    9 ASSSPSASAVTSIRFPSPRRFAVVGAGFAGVSVAWHLLQRCEFQHTSSSGPVSVDLFDEAGIG-GGASGVSGGLLHPYTPKGKFLWKGKQGWQAALNLLDVAEAAVPLTGESKPIAWRR------GILRPLVAEKHIRD----ARKLDGGCDGSRIEGIRCLERPVAKAMVPGLELPENGLGLYIPDGINLHPRTYLDALWLACADFAHNA-------CPGTRAALVKQHVSSLAELSREGYNAVVVCTGSKAVLLPELAGKLPLSMCRG--VVADLELPSEYEEYHSQAPNLLSHAWL----AVQGA-------------RKIVLGATKNWNSGP--ECEEVSLQEETLVQDE-----LLQRAAQFYPLIERWKVK-SLRAGVRAMPPRTPLGALPLAGCIN----ELVKPLQSETQWWLIGGLGSRGLMYHGLLGERVAAAVTAGDESLIP 412          
The following BLAST results are available for this feature:
BLAST of NO07G02510 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_005855788.11.100e-12755.20hypothetical protein NGA_2083600 [Nannochloropsis ... [more]
EWM27099.12.300e-12755.20FAD dependent oxidoreductase [Nannochloropsis gadi... [more]
GAX20490.16.100e-3529.51hypothetical protein FisN_24Hu260 [Fistulifera sol... [more]
GAX13514.16.100e-3529.13hypothetical protein FisN_27Lu010 [Fistulifera sol... [more]
XP_002183273.12.300e-3428.66predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CEM09670.12.300e-3433.16unnamed protein product [Vitrella brassicaformis C... [more]
OEU09495.11.400e-3129.40nucleotide-binding domain-containing protein [Frag... [more]
XP_002288540.11.100e-2827.15predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBJ26082.11.200e-2728.08conserved unknown protein [Ectocarpus siliculosus][more]
XP_024359298.11.100e-2328.48uncharacterized protein LOC112274237 isoform X1 [P... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL100nonsL100Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR072ncniR072Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000608NSK000608Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02510.1NO07G02510.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|669156gene_2578Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100046g2gene3428Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02510.1NO07G02510.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02510 ID=NO07G02510|Name=NO07G02510|organism=Nannochloropsis oceanica|type=gene|length=1664bp
AAAACATTCCCACTTCCTCCATCCCTCCCTTCCACCAACCAACATGCACA
CATCCACATCATCGCAGGAACACGGCATGCCAGCGGGCGGTGTGAGGGTC
TCGGTTGCGGTCCCTCTGCTCGCATGCTCCTGCCTCATTTTTTGCAGTAC
AATGGCGCGGCCCTCAGCCTTCCTTCTAAGCCTCCCGTCTCGTTCACACC
GCCCCCTCCTTGCTCGTCTTTTCGCCTCGTCAGTGCCAAACAAATCAGAA
CGGCTGAAGTTAAATATAGCAATTGTTGGTGGCGGTTTGTCTGGCCTGTC
GACAGCTTGGCATCTGGCAGGCCGTGTTCAACGCCTTACCATCTATGACA
GCATGGCACCAGGGCAGGCCTCGGCCTCGGCCGTTGCGGGCGGCTTACTC
CACCCACTCACGCCCAAGAACCGCATAATTTGGTCAGGACTGGAAGGATT
CGAAGCCACTCTCCGCCTCGTGGAGGCAAGCAAGGCAGCGCTCTTGAATG
CAGGAGATGAAGCTGCCGCCCGTCGGCTGCACTCATCACCGGGCACCATT
CTTCGTCCAGCATTGATTCCACAACACGTCCTCAACTACCAGGCAGCCGC
CGCCAAGCTCCCGGAATGGCTAAAATGGCTGGAGGGAGAGGAATGGCAAT
GTAAAGCCAACAATCCGGGGCATGGATTGCTGTTGCGGAATAGTATTGTG
TTGTCCATGCCTGACTACTTGCGAGGCCTCTGGCTGTCACTTCAACAAAC
ACACGGCAACACCACCATGTTGACATGGGAACAGTGCACCTTTTCCAATG
CTCAGGCTATCAAACATAAAAAAAAAAATGCAGGAGCTGCAGCGTACGAT
GTAATCGTCCTAGCCTCAGGGGCCGGCATCTGCTCTTTCCCCGCACTGAA
GCATCTACCCATTGAGCTGGTCACAGGACGCACTTTACTGGTGGATCAAG
AGGAAGAAGATAAGGAAGGGAGGGAAGAGAGCGCGGCGGGGACCTCATTG
GGCTCAGCATTGCTCTGCGGCGAATATGTAGTGCCGGGGGTGGACTTGAG
GAGGGGCGAAGACTGGACGAAGGCAGAGAGGAGAGTGCTGAGGTGTGGTT
CGACAAAGGAATACGTGAAAGATCCTTGGGGACAAGTGGCCAAAGTGAAA
GGCGGGGAGGAGAAAGAGGAAAAGGGCGAGGAGAAGATGAGGGCTTTGCG
AGAGAAAGCGGAGAGGATCTACCCTCCTTTGAAAAGGAGACCTGCCGCGT
ACCGTATCACGACTGGTACTCGCGTAGCCACGCCAAGAAGTGATCTTGGC
AGGGTTCCTATACTCGGTCGTGTTTCTTTGAGAGGAAAGGAGGGAGGAAA
GGAGGAAGGGGAGGAGGTGGAGACGTGGTTGTACACCGGGTTGGGTGGGA
GGGGCTTGATTCATCATGCCTTTCTGGGGGCAAAACTGGCAGAGGCTATC
TTGATGGGGGATGAGACATTACTGCCCTTCCAGGTACGGGCACCCCTTGT
CAAGCAGAGGGAAAAAAGATTTTGGTGAAGGTATGAGTGGTCGTAGGAAA
ATCATGAGAGAAATACAGAATCTTAGTCGTGGTAGGAGTGCAAGGCATTG
GCACTGTAAGTAATGCATGTCAGTTCATCGTAAAATAGAAAAAAGAAAAG
CACACAAACGCACA
back to top

protein sequence of NO07G02510.1

>NO07G02510.1-protein ID=NO07G02510.1-protein|Name=NO07G02510.1|organism=Nannochloropsis oceanica|type=polypeptide|length=495bp
MHTSTSSQEHGMPAGGVRVSVAVPLLACSCLIFCSTMARPSAFLLSLPSR
SHRPLLARLFASSVPNKSERLKLNIAIVGGGLSGLSTAWHLAGRVQRLTI
YDSMAPGQASASAVAGGLLHPLTPKNRIIWSGLEGFEATLRLVEASKAAL
LNAGDEAAARRLHSSPGTILRPALIPQHVLNYQAAAAKLPEWLKWLEGEE
WQCKANNPGHGLLLRNSIVLSMPDYLRGLWLSLQQTHGNTTMLTWEQCTF
SNAQAIKHKKKNAGAAAYDVIVLASGAGICSFPALKHLPIELVTGRTLLV
DQEEEDKEGREESAAGTSLGSALLCGEYVVPGVDLRRGEDWTKAERRVLR
CGSTKEYVKDPWGQVAKVKGGEEKEEKGEEKMRALREKAERIYPPLKRRP
AAYRITTGTRVATPRSDLGRVPILGRVSLRGKEGGKEEGEEVETWLYTGL
GGRGLIHHAFLGAKLAEAILMGDETLLPFQVRAPLVKQREKRFW*
back to top
Synonyms
Publications