NO07G02410, NO07G02410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02410 vs. NCBI_GenBank
Match: XP_005856405.1 (wd40 repeat domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU19962.1 wd40 repeat domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 151.0 bits (380), Expect = 1.400e-32 Identity = 71/109 (65.14%), Postives = 87/109 (79.82%), Query Frame = 0 Query: 56 WNHTQQVLACGTDDGAVALMLDSGKMLEVLQE-PCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILL 164 WNHTQQVLACGT++GA+ LML+SGK LEVL+E AR PP PI SLAWG RSR+L+TTGQ P LWDLK+KER+M+F GH A +T+VA AP+ VASG+ +GE+LL Sbjct: 1 WNHTQQVLACGTEEGAITLMLESGKTLEVLKEADVGARVPPMPITSLAWGGRSRYLLTTGQAHSPHLWDLKRKERVMAFGGHEAHVTAVAFAPDSERVASGNHHGEVLL 109
BLAST of NO07G02410 vs. NCBI_GenBank
Match: PKK73732.1 (WD40 repeat-like protein [Rhizophagus irregularis]) HSP 1 Score: 146.0 bits (367), Expect = 4.400e-31 Identity = 94/366 (25.68%), Postives = 178/366 (48.63%), Query Frame = 0 Query: 1 MPSHLIATATDDVVSTWEL---TREEAQLQHQQIIYE--------SRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVLQEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDS-TAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGLPIRALSVQAQHPRSSGHTTYGSSTSMNGRS 355 MP++L+ +A+ + + W+L + +++ ++I E S TP ST VN W+H Q+LA +DG + + G ++E + N I +L + +S++++ G ++WD K+ I F+GH +TIT + L +++ VAS NG I++H N +L + L + L + ++ LL AG DG R+WD+ + + T++ H+ I +A SP++ L+++AG D++ +L+DV+ ++ LK + +P+T++ F + I G G IYD+R+ ++ + T + + PI+ L Q + S T + S + R+ Sbjct: 1 MPTNLLVSASTN-IKVWDLMSRDKNSNEIETSKVIPEHLLGAEVASFTPNNTST------AVNVARWSHDNQLLAVAGNDGTLTIHNSQGTLIETILSNDNESNDYADINALRFLNKSQYILFGGSDKIVNVWDRKESTFIEPFKGHRSTITCIDLNLDESIVASSALNGNIIIHNRQKSNTCNNLTV-------------LTKQPINVLQYSYVKRGLLAAGGDDGSLRLWDTGVSTTAIQTYEKAHHSEIKGIAFSPSNQHLLISAGMDKRIVLYDVSKKESLKNIHTDSPLTALAFRADCVTIAAGTLQGKILIYDLRSYNKAMCTLYGHEPHPIQCLQFQEKERVSVRRPTLSRNKSGHVRT 346
BLAST of NO07G02410 vs. NCBI_GenBank
Match: PKY45998.1 (WD40 repeat-like protein [Rhizophagus irregularis]) HSP 1 Score: 146.0 bits (367), Expect = 4.400e-31 Identity = 94/366 (25.68%), Postives = 178/366 (48.63%), Query Frame = 0 Query: 1 MPSHLIATATDDVVSTWEL---TREEAQLQHQQIIYE--------SRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVLQEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDS-TAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGLPIRALSVQAQHPRSSGHTTYGSSTSMNGRS 355 MP++L+ +A+ + + W+L + +++ ++I E S TP ST VN W+H Q+LA +DG + + G ++E + N I +L + +S++++ G ++WD K+ I F+GH +TIT + L +++ VAS NG I++H N +L + L + L + ++ LL AG DG R+WD+ + + T++ H+ I +A SP++ L+++AG D++ +L+DV+ ++ LK + +P+T++ F + I G G IYD+R+ ++ + T + + PI+ L Q + S T + S + R+ Sbjct: 1 MPTNLLVSASTN-IKVWDLMSRDKNSNEIETSKVIPEHLLGAEVASFTPNNTST------AVNVARWSHDNQLLAVAGNDGTLTIHNSQGTLIETILSNDNESNDYADINALRFLNKSQYILFGGSDKIVNVWDRKESTFIEPFKGHRSTITCIDLNLDESIVASSALNGNIIIHNRQKSNTCNNLTV-------------LTKQPINVLQYSYVKRGLLAAGGDDGSLRLWDTGVSTTAIQTYEKAHHSEIKGIAFSPSNQHLLISAGMDKRIVLYDVSKKESLKNIHTDSPLTALAFRADCVTIAAGTLQGKILIYDLRSYNKAMCTLYGHEPHPIQCLQFQEKERVSVRRPTLSRNKSGHVRT 346
BLAST of NO07G02410 vs. NCBI_GenBank
Match: GBC52990.1 (Protein NEDD1 [Rhizophagus irregularis DAOM 181602] >PKC14577.1 WD40 repeat-like protein [Rhizophagus irregularis] >PKY14604.1 WD40 repeat-like protein [Rhizophagus irregularis] >POG73142.1 hypothetical protein GLOIN_2v1589601 [Rhizophagus irregularis DAOM 181602=DAOM 197198]) HSP 1 Score: 143.7 bits (361), Expect = 2.200e-30 Identity = 93/366 (25.41%), Postives = 177/366 (48.36%), Query Frame = 0 Query: 1 MPSHLIATATDDVVSTWEL---TREEAQLQHQQIIYE--------SRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVLQEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDS-TAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGLPIRALSVQAQHPRSSGHTTYGSSTSMNGRS 355 MP++L+ +A+ + + W+L + +++ ++I E S TP ST VN W+H Q+LA +DG + + G ++E + N I +L + +S++++ G ++WD K+ I F+GH +TIT + L +++ VAS NG I++H N +L + L + L + ++ LL AG DG R+WD+ + + ++ H+ I +A SP++ L+++AG D++ +L+DV+ ++ LK + +P+T++ F + I G G IYD+R+ ++ + T + + PI+ L Q + S T + S + R+ Sbjct: 1 MPTNLLVSASTN-IKVWDLMSRDKNSNEIETSKVIPEHLLGAEVASFTPNNTST------AVNVARWSHDNQLLAVAGNDGTLTIHNSQGTLIETILSNDNESNDYADINALRFLNKSQYILFGGSDKIVNVWDRKESTFIEPFKGHRSTITCIDLNLDESIVASSALNGNIIIHNRQKSNTCNNLTV-------------LTKQPINVLQYSYVKRGLLAAGGDDGSLRLWDTGVSTTAIQKYEKAHHSEIKGIAFSPSNQHLLISAGMDKRIVLYDVSKKESLKNIHTDSPLTALAFRADCVTIAAGTLQGKILIYDLRSYNKAMCTLYGHEPHPIQCLQFQEKERVSVRRPTLSRNKSGHVRT 346
BLAST of NO07G02410 vs. NCBI_GenBank
Match: PKC74035.1 (WD40 repeat-like protein [Rhizophagus irregularis]) HSP 1 Score: 143.7 bits (361), Expect = 2.200e-30 Identity = 93/366 (25.41%), Postives = 177/366 (48.36%), Query Frame = 0 Query: 1 MPSHLIATATDDVVSTWEL---TREEAQLQHQQIIYE--------SRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVLQEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDS-TAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGLPIRALSVQAQHPRSSGHTTYGSSTSMNGRS 355 MP++L+ +A+ + + W+L + +++ ++I E S TP ST VN W+H Q+LA +DG + + G ++E + N I +L + +S++++ G ++WD K+ I F+GH +TIT + L +++ VAS NG I++H N +L + L + L + ++ LL AG DG R+WD+ + + ++ H+ I +A SP++ L+++AG D++ +L+DV+ ++ LK + +P+T++ F + I G G IYD+R+ ++ + T + + PI+ L Q + S T + S + R+ Sbjct: 1 MPTNLLVSASTN-IKVWDLMSRDKNSNEIETSKVIPEHLLGAEVASFTPNNTST------AVNVARWSHDNQLLAVAGNDGTLTIHNSQGTLIETILSNDNESNDYADINALRFLNKSQYILFGGSDKIVNVWDRKESTFIEPFKGHRSTITCIDLNLDESIVASSALNGNIIIHNRQKSNTCNNLTV-------------LTKQPINVLQYSYVKRGLLAAGGDDGSLRLWDTGVSTTAIQKYEKAHHSEIKGIAFSPSNQHLLISAGMDKRIVLYDVSKKESLKNIHTDSPLTALAFRADCVTIAAGTLQGKILIYDLRSYNKAMCTLYGHEPHPIQCLQFQEKERVSVRRPTLSRNKSGHVRT 346
BLAST of NO07G02410 vs. NCBI_GenBank
Match: XP_024392843.1 (protein NEDD1-like [Physcomitrella patens] >XP_024392844.1 protein NEDD1-like [Physcomitrella patens] >PNR42168.1 hypothetical protein PHYPA_016997 [Physcomitrella patens]) HSP 1 Score: 140.2 bits (352), Expect = 2.400e-29 Identity = 94/313 (30.03%), Postives = 152/313 (48.56%), Query Frame = 0 Query: 39 TVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVLQEPCEAR--NPPTPIISLAW-GKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDSTAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAF-QGLPIRALSVQAQHPRSSGHTTYGSS 348 T Q T S GY VNC+ WNHT V+A +D ++L + +G+ + V+ +P E N I+ + + K SR+L + G G +WDL+++ I +GH TIT V D +AS G++++H+L S L DP + +R + + + LLL DG VWD+T+ + +++ QH + SP SDK++V+AG D+K +D +K + V AP S+ F +G+ + G +G YD+R + +P A+ + +LS Q +P S T G S Sbjct: 30 TFQYTPSPGY-QVNCVRWNHTNLVVASAGEDCKISLWMKNGQTVGVVPQPGEGTDDNIDESILGICFSSKGSRYLGSGGTGKIVRIWDLQRRRCIKWLKGHTDTITGVMYNCRDEHLASISIKGDLIVHSLASGTRAAELK-----DPHNQV--------LRVMEYSRLSRHLLLTAGDDGTVHVWDTTSRSPKVSWLKQHSAPTTGLCFSPTSDKMIVSAGLDKKLYTYDPGVKKPVFCVPYEAPFASLAFRDDGNTLAAGTNSGRVVFYDLRGRPQPFTILRAYGASEAVTSLSWQRSNPISVKDTRSGES 328
BLAST of NO07G02410 vs. NCBI_GenBank
Match: XP_024373568.1 (protein NEDD1-like [Physcomitrella patens] >PNR56056.1 hypothetical protein PHYPA_006953 [Physcomitrella patens]) HSP 1 Score: 139.4 bits (350), Expect = 4.200e-29 Identity = 93/311 (29.90%), Postives = 150/311 (48.23%), Query Frame = 0 Query: 39 TVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVLQEPCEAR--NPPTPIISLAW-GKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDSTAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGL-PIRALSVQAQHPRSSGHTTYG 346 T Q T S GY VNC WNHT V+A +D ++L + +G+ L VL +P N I+ + + K SR+L + G G +WDL+++ I +GH TIT V D +AS G++++H+L S L DP + +R + + + LLL DG +WD+T+ + +++ QH + SP SDK++V+AG D+K ++D RK + V AP S+ F +G+ + G +G YD+R + +P A+ + +LS Q +P + T G Sbjct: 30 TFQYTPSPGY-QVNCARWNHTNLVVASAGEDCKISLWMKNGQSLGVLPQPGGEPDVNIDESILGICFSSKGSRYLGSGGTGKVVRVWDLQRRRCIKWLKGHTDTITGVMYNCRDEHLASISMKGDLIIHSLASGTRAAELK-----DPHNQV--------LRVMEYSRLSRHLLLTAGDDGTVHLWDTTSRSPKLSWLKQHSAPTTGLCFSPTSDKMIVSAGLDKKLYIYDPGVRKPVYCVPYEAPFASLAFRDDGNTLAAGTNSGRVVFYDVRGRPQPFTILRAYSASEAVISLSWQRSNPTTVKDTRPG 326
BLAST of NO07G02410 vs. NCBI_GenBank
Match: EOA20101.1 (hypothetical protein CARUB_v10000379mg [Capsella rubella]) HSP 1 Score: 136.3 bits (342), Expect = 3.500e-28 Identity = 89/324 (27.47%), Postives = 152/324 (46.91%), Query Frame = 0 Query: 34 ESRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVL----QEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDSTAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGL-PIRALSVQAQHPRSSGHTTYGSSTSMNG 353 +S P V S S VN + WNHT V+A +D ++L +G+ L + ++ + IS + K SR++ + G G +WDL++K I +GH +TIT V +D +AS G++++H L S L + P+G + +R L + + + LLL DG +WD+T + M++ QH V SP+++K++ + G D+K +D +R+ + AP +S+ F G ++ G NG YD+R + +P+ HAF + +LS Q P + Y S ++ G Sbjct: 29 DSGDPCVLSYTPSPGSAVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDGAEECLSAISFS-KKGSRYICSGGTGQLVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATEL----------KDPNGQV---LRLLDYSRSSRHLLLTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDSGSRRSSSCISYEAPFSSLAFGDNGFILAAGTSNGRVVFYDVRGKPQPVTVLHAFSNSEDVTSLSWQTSKPVNVNEKNYSSEMALLG 338
BLAST of NO07G02410 vs. NCBI_GenBank
Match: XP_023635953.1 (protein NEDD1 isoform X1 [Capsella rubella]) HSP 1 Score: 136.3 bits (342), Expect = 3.500e-28 Identity = 89/324 (27.47%), Postives = 152/324 (46.91%), Query Frame = 0 Query: 34 ESRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVL----QEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDSTAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGL-PIRALSVQAQHPRSSGHTTYGSSTSMNG 353 +S P V S S VN + WNHT V+A +D ++L +G+ L + ++ + IS + K SR++ + G G +WDL++K I +GH +TIT V +D +AS G++++H L S L + P+G + +R L + + + LLL DG +WD+T + M++ QH V SP+++K++ + G D+K +D +R+ + AP +S+ F G ++ G NG YD+R + +P+ HAF + +LS Q P + Y S ++ G Sbjct: 29 DSGDPCVLSYTPSPGSAVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDGAEECLSAISFS-KKGSRYICSGGTGQLVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATEL----------KDPNGQV---LRLLDYSRSSRHLLLTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDSGSRRSSSCISYEAPFSSLAFGDNGFILAAGTSNGRVVFYDVRGKPQPVTVLHAFSNSEDVTSLSWQTSKPVNVNEKNYSSEMALLG 338
BLAST of NO07G02410 vs. NCBI_GenBank
Match: XP_023635954.1 (protein NEDD1 isoform X2 [Capsella rubella]) HSP 1 Score: 136.3 bits (342), Expect = 3.500e-28 Identity = 89/324 (27.47%), Postives = 152/324 (46.91%), Query Frame = 0 Query: 34 ESRTPTVQSTMSSGYGTVNCLGWNHTQQVLACGTDDGAVALMLDSGKMLEVL----QEPCEARNPPTPIISLAWGKRSRHLVTTGQGDCPSLWDLKKKERIMSFQGHGATITSVALAPEDACVASGDKNGEILLHALHSENPGMSLPLDVKGDPVPRTPSGLMAAGVRSLHFWTARQPLLLAGHRDGVARVWDSTAGACLMTFKGQHYMSIVAVAGSPASDKLMVTAGQDRKALLWDVTNRKLLKEVKALAPITSMCFNPEGDMIILGLKNGNCSIYDIRNQHEPLRTTHAFQGL-PIRALSVQAQHPRSSGHTTYGSSTSMNG 353 +S P V S S VN + WNHT V+A +D ++L +G+ L + ++ + IS + K SR++ + G G +WDL++K I +GH +TIT V +D +AS G++++H L S L + P+G + +R L + + + LLL DG +WD+T + M++ QH V SP+++K++ + G D+K +D +R+ + AP +S+ F G ++ G NG YD+R + +P+ HAF + +LS Q P + Y S ++ G Sbjct: 29 DSGDPCVLSYTPSPGSAVNSVKWNHTNLVVASTGEDKKISLWRKNGQSLGTVPVTGKDGGDGAEECLSAISFS-KKGSRYICSGGTGQLVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVSVGGDLIVHNLASGARATEL----------KDPNGQV---LRLLDYSRSSRHLLLTAGDDGTVHLWDTTGRSPKMSWLKQHSAPTAGVCFSPSNEKIIASVGMDKKLYTYDSGSRRSSSCISYEAPFSSLAFGDNGFILAAGTSNGRVVFYDVRGKPQPVTVLHAFSNSEDVTSLSWQTSKPVNVNEKNYSSEMALLG 338 The following BLAST results are available for this feature:
BLAST of NO07G02410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02410 ID=NO07G02410|Name=NO07G02410|organism=Nannochloropsis oceanica|type=gene|length=2581bpback to top protein sequence of NO07G02410.1 >NO07G02410.1-protein ID=NO07G02410.1-protein|Name=NO07G02410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=697bpback to top Synonyms
Publications
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