NO07G02360, NO07G02360 (gene) Nannochloropsis oceanica

Overview
NameNO07G02360
Unique NameNO07G02360
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1168
Alignment locationchr7:694708..695875 -

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Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:694708..695875 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_005856404.1 (hypothetical protein NGA_2096500 [Nannochloropsis gaditana CCMP526] >EKU19961.1 hypothetical protein NGA_2096500 [Nannochloropsis gaditana CCMP526] >EWM27158.1 hypothetical protein Naga_100010g69 [Nannochloropsis gaditana])

HSP 1 Score: 226.1 bits (575), Expect = 9.200e-56
Identity = 112/149 (75.17%), Postives = 130/149 (87.25%), Query Frame = 0
Query:   42 GRNAKTRVNRLFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFELGR 191
            GR+AK RVN+LF +HA IM  +GL+SA FPEVLVY+LHH+++GFH+RHEGG AR+AFVTMRVFGCFLLAQAY+L+V+R  +DG MRRA VQSYFVAF LTT+AL RAQLTEDMPVR SNWLVI  F  LT AYAW+SFFERISV+ELGR
Sbjct:   25 GRDAKKRVNKLFAIHAGIMFTLGLLSALFPEVLVYLLHHSSDGFHSRHEGGTARVAFVTMRVFGCFLLAQAYLLFVLRGGTDGNMRRAAVQSYFVAFGLTTLALARAQLTEDMPVRLSNWLVILSFFALTMAYAWFSFFERISVYELGR 173          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_014156381.1 (hypothetical protein SARC_05231 [Sphaeroforma arctica JP610] >KNC82479.1 hypothetical protein SARC_05231 [Sphaeroforma arctica JP610])

HSP 1 Score: 88.6 bits (218), Expect = 2.300e-14
Identity = 50/147 (34.01%), Postives = 83/147 (56.46%), Query Frame = 0
Query:   45 AKTRVNRLFTVHALIMLAVGLVSASFPEVL-VYILHHNAE---GFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFE 188
            AK  ++ LF +HA I   +G     FP    ++++H + E   G      G A +I  + +R++G  +L Q +++ + R V+D  MR+ +V+ Y + F LT +AL RAQ TE   +   NW+ I +FA L+A YAW+   + I++FE
Sbjct:    6 AKRTLDNLFLLHASISCIIGATLFIFPHFAELFLIHQDNETVIGLTDHTAGDAQKITHLVLRLYGALVLGQGHLVLMARDVADAPMRKVIVRVYAITFGLTAVALLRAQTTEGGSLNGYNWINIVVFAWLSAFYAWFVLVQPIAIFE 152          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: OLP95593.1 (Protein MEI2-like 4 [Symbiodinium microadriaticum])

HSP 1 Score: 82.0 bits (201), Expect = 2.200e-12
Identity = 49/140 (35.00%), Postives = 75/140 (53.57%), Query Frame = 0
Query:   49 VNRLFTVHALIMLAVGLVSASFPEVLVYILHHNAEG-FHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFE 188
            +N L TVH  + +  G  +   P +  + L     G F    + G  +I  V +R++G  +L Q+++ +  +   DG +R A V++Y V F LTT+AL RAQLT D      NWL + +FA L A Y W+S  +  +VFE
Sbjct:    9 LNLLLTVHCAVAVGFGGSAFMLPHLFGFFLGEEWHGTFRWNPDDGQVKITHVVIRLYGALILGQSFLTWAAKQTDDGRVRLAAVRAYAVVFGLTTLALLRAQLT-DSTWHVLNWLNLLLFACLAAFYGWFSLVQPPAVFE 147          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: OWZ08411.1 (hypothetical protein PHMEG_00019055 [Phytophthora megakarya])

HSP 1 Score: 72.0 bits (175), Expect = 2.200e-9
Identity = 45/146 (30.82%), Postives = 73/146 (50.00%), Query Frame = 0
Query:   43 RNAKTRVNRLFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFEL 189
            +  + +++RLF VH +I +  G +    P  L+  +  +A   H  HE          +R++G   LAQ ++++  R VSD  +RR   Q+Y + F L  +AL RAQL       T +W+ I +   L  AY ++  F+ I  FEL
Sbjct:    2 QTVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMSPMLGDASNTHLAHE---------FVRLYGALTLAQGWMVWRTRHVSDALVRRTFCQAYCICFLLQAVALLRAQLASPESHSTLHWVNILLLGGLGCAYGYFLVFKTIKAFEL 138          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_008879518.1 (hypothetical protein H310_13686 [Aphanomyces invadans] >ETV91881.1 hypothetical protein H310_13686 [Aphanomyces invadans])

HSP 1 Score: 68.6 bits (166), Expect = 2.500e-8
Identity = 53/165 (32.12%), Postives = 76/165 (46.06%), Query Frame = 0
Query:   28 AGRRGAPGDGAFLFGRNAKTRVNR----LFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFEL 189
            AGR  +  D   L    + T V R    LF VHA I + +G      P  L       +E  H  HE          +R++G   LAQ ++++  R V D  +R+   Q+Y + F L   AL RAQ++        NW+ I + A L AAY ++  F+ I VFEL
Sbjct:    2 AGRPPSWWDQVLLSHTGSTTEVRRRLDTLFIVHAGIAIVIGGSCLVLPHSLAMSALGASEYGHLVHE---------VVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCLCFLLQAAALVRAQVSSPESHSVLNWVNIIVLAALGAAYGYFVVFKTIKVFEL 157          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_008910911.1 (hypothetical protein PPTG_15904 [Phytophthora parasitica INRA-310] >ETI39230.1 hypothetical protein F443_15178 [Phytophthora parasitica P1569] >ETK79437.1 hypothetical protein L915_14719 [Phytophthora parasitica] >ETL32849.1 hypothetical protein L916_14633 [Phytophthora parasitica] >ETL86109.1 hypothetical protein L917_14436 [Phytophthora parasitica] >ETM39258.1 hypothetical protein L914_14577 [Phytophthora parasitica] >ETN03684.1 hypothetical protein PPTG_15904 [Phytophthora parasitica INRA-310] >ETO67971.1 hypothetical protein F444_15156 [Phytophthora parasitica P1976] >ETP09142.1 hypothetical protein F441_14987 [Phytophthora parasitica CJ01A1] >ETP37174.1 hypothetical protein F442_15011 [Phytophthora parasitica P10297] >KUF77343.1 hypothetical protein AM587_10010166 [Phytophthora nicotianae])

HSP 1 Score: 68.2 bits (165), Expect = 3.200e-8
Identity = 42/146 (28.77%), Postives = 71/146 (48.63%), Query Frame = 0
Query:   43 RNAKTRVNRLFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFEL 189
            +  + +++RLF VH +I +  G +    P  L+  +  +    H  HE          +R++G   LAQ ++++  R VSD  +RR   Q+Y + F L  +AL RAQ+         +W+ I +   L  AY ++  F+ I  FEL
Sbjct:    2 QTVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMAPMLGDGNNTHMAHE---------FVRLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQIASPESHSMLHWINILLLGGLGCAYGYFLVFKTIKAFEL 138          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: GAY04701.1 (Hypothetical protein PINS_012514 [Pythium insidiosum] >GAX94534.1 Hypothetical protein PINS_002465 [Pythium insidiosum] >GAX94538.1 Hypothetical protein PINS_002469 [Pythium insidiosum])

HSP 1 Score: 67.8 bits (164), Expect = 4.200e-8
Identity = 45/143 (31.47%), Postives = 73/143 (51.05%), Query Frame = 0
Query:   46 KTRVNRLFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFEL 189
            + ++++LFT HA+I +  G +    P   +  +  +A   H  HE          +R++G   LAQ ++++  R VSD  +RR   Q+Y + F L ++AL RAQL+        +WL I I   L  AY ++  F+ I  FEL
Sbjct:    5 RRQLDQLFTAHAVIAIVSGALCFFTPHSHLSPILGDANNTHFAHE---------FIRLYGALTLAQGWLVWRTRLVSDALIRRTFCQAYCICFCLQSLALLRAQLSAPESHSILHWLNILILGGLGLAYGYFLVFKTIKAFEL 138          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_005829703.1 (hypothetical protein GUITHDRAFT_153519 [Guillardia theta CCMP2712] >EKX42723.1 hypothetical protein GUITHDRAFT_153519 [Guillardia theta CCMP2712])

HSP 1 Score: 67.4 bits (163), Expect = 5.500e-8
Identity = 47/151 (31.13%), Postives = 77/151 (50.99%), Query Frame = 0
Query:   46 KTRVNRLFTVHALIMLAVGLVSASFPEVL-VYILHHN-AEGFH--ARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTED--MPVRTSNWLVISIFAVLTAAYAWYSFFERISVFELGR 191
            K R+  LF     +    GL++  FP+   V+    + ++G H  A        +A   +R++G  L  QA++++VV  V DG ++RA +Q YF  F  +  A+  A   +D  M       L I I ++LTA Y W++FF+  +V+EL R
Sbjct:   15 KRRLRSLFLFQVYVSAFAGLIAFVFPKAFGVFFTDGSVSDGVHSGAGASNSQGSVAHFMIRLYGALLGTQAWLVWVVAKVDDGYVKRAFIQGYFGCFAASLAAVVAAHAQDDGTMAGHFFGALKIVILSILTAGYGWFAFFQPPAVYELPR 165          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_009516784.1 (hypothetical protein PHYSODRAFT_323028 [Phytophthora sojae] >EGZ29509.1 hypothetical protein PHYSODRAFT_323028 [Phytophthora sojae])

HSP 1 Score: 66.2 bits (160), Expect = 1.200e-7
Identity = 44/147 (29.93%), Postives = 73/147 (49.66%), Query Frame = 0
Query:   43 RNAKTRVNRLFTVHALIMLAVGLVSASFPEVLVY-ILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFEL 189
            ++ + +++RLF VH +I +  G +    P  L+  +L   +   H  HE          +R++G   LAQ ++++  R VSD  +RR   Q+Y + F L  +AL RAQL         +W+ I +   L  AY ++  F+ I  FEL
Sbjct:    2 QSVRRQLDRLFAVHMVIAVVTGALCFLTPHSLMTPMLGDASNDTHLAHE---------FVRLYGALTLAQGWMVWRTRLVSDALIRRTFCQAYCICFLLQAVALLRAQLASPESHSMLHWVNILLLGGLGCAYGYFLVFKTIKAFEL 139          
BLAST of NO07G02360 vs. NCBI_GenBank
Match: XP_008604975.1 (hypothetical protein SDRG_01236 [Saprolegnia diclina VS20] >EQC41261.1 hypothetical protein SDRG_01236 [Saprolegnia diclina VS20])

HSP 1 Score: 65.9 bits (159), Expect = 1.600e-7
Identity = 42/146 (28.77%), Postives = 70/146 (47.95%), Query Frame = 0
Query:   43 RNAKTRVNRLFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVTMRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQLTEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFEL 189
            + A+ +++ LF VHA I + +G      P  L        +  H  HE          +R++G   LAQ ++++  R V D  +R+   Q+Y + F L ++A+ RAQ+         NW+ I + A L AAY ++  F+    FEL
Sbjct:    2 QEARRQLDLLFVVHASISIVIGSACLLLPHSLAMAALQTPQYGHLVHE---------MVRLYGALTLAQGWLVWKTRLVGDALIRKTFCQAYCMCFSLQSLAMFRAQVASPESHSLLNWINIFVLAGLGAAYGYFLAFKTAKAFEL 138          
The following BLAST results are available for this feature:
BLAST of NO07G02360 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 13
Match NameE-valueIdentityDescription
XP_005856404.19.200e-5675.17hypothetical protein NGA_2096500 [Nannochloropsis ... [more]
XP_014156381.12.300e-1434.01hypothetical protein SARC_05231 [Sphaeroforma arct... [more]
OLP95593.12.200e-1235.00Protein MEI2-like 4 [Symbiodinium microadriaticum][more]
OWZ08411.12.200e-930.82hypothetical protein PHMEG_00019055 [Phytophthora ... [more]
XP_008879518.12.500e-832.12hypothetical protein H310_13686 [Aphanomyces invad... [more]
XP_008910911.13.200e-828.77hypothetical protein PPTG_15904 [Phytophthora para... [more]
GAY04701.14.200e-831.47Hypothetical protein PINS_012514 [Pythium insidios... [more]
XP_005829703.15.500e-831.13hypothetical protein GUITHDRAFT_153519 [Guillardia... [more]
XP_009516784.11.200e-729.93hypothetical protein PHYSODRAFT_323028 [Phytophtho... [more]
XP_008604975.11.600e-728.77hypothetical protein SDRG_01236 [Saprolegnia dicli... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR134ngnoR134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02360.1NO07G02360.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580785gene_2562Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g69gene3382Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02360.1NO07G02360.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02360 ID=NO07G02360|Name=NO07G02360|organism=Nannochloropsis oceanica|type=gene|length=1168bp
TTATCTTTATCTTATCTTTATCTTATCTTTATCTTATCTTTATCTTATCT
TTATCTCATTTTTATCTTTCATCTTATCTTTTATCGTATCGTCTGAAGCA
TTGCCGTTGGGGGAGCCGTTGGTGAAGCTCTCACGTTGGCATCGTGCGGC
CCTTACCGTGTGCCCAACCTGCTGTCAACTAGACGCTTGCTTAAGGTGAA
TAGGAATTGGTCGCACATAAAATTTGAAATCGATGATCCTGTTTGTAAAG
AAAGCAAACATTAATTGAATCGGGCCCCGCCATCGGGAAAGAGAGATCTT
CTCTGAGACAGTCACTGCCTTCTTTTCTTTCTCTTCGAGGGGAGAATTTA
TAATGCCTTGTTGTTCACCATCAGCCACGAAGTCGCTGAGCAAACCCCAG
TCTCAGAAGGCACCTTCTTGATCACAGCACTGAATTCCTGGAATCGTCAA
GTCCCTTTTAACACTCTGACCAACCCATGGCTTCACCACAGGCGAGCAAC
AAGAAGGCGCGCAATACCATGCTGCGAATTGGTGGGCCGCCTGCGCGACC
TTTTGGTGCCGGTCGAAGAGGGGCGCCAGGAGATGGTGCATTTTTATTCG
GGAGAAATGCGAAGACGCGAGTCAATCGCCTATTTACCGTCCACGCTTTG
ATTATGTTGGCTGTGGGGCTGGTGAGTGCCTCTTTCCCCGAAGTCCTTGT
TTACATCCTCCACCACAATGCCGAGGGATTCCACGCACGCCACGAAGGCG
GTGCTGCACGCATCGCGTTTGTAACCATGAGAGTCTTTGGTTGCTTCCTG
TTGGCCCAAGCGTACGTACTTTACGTCGTGAGGACCGTCTCGGACGGCAC
CATGCGTCGGGCTGTGGTTCAAAGCTATTTCGTGGCTTTTTTTCTCACGA
CGATAGCTTTAACGCGGGCTCAGCTCACAGAGGACATGCCTGTACGTACA
AGCAACTGGCTGGTTATTTCAATATTTGCGGTGCTCACAGCAGCCTACGC
TTGGTATTCGTTCTTTGAGCGGATAAGCGTTTTCGAGCTGGGACGATGAA
GCCTTGGAGAGAGAGGAAGAGCTTGAAGAAGCGAAAAGGAGGGAATGTAC
AGGCACAATTTGCAAGTAATTTAAAGCATCAAGATAAGTAACACAAGCAT
GCTATTCTCTTTATTGGT
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protein sequence of NO07G02360.1

>NO07G02360.1-protein ID=NO07G02360.1-protein|Name=NO07G02360.1|organism=Nannochloropsis oceanica|type=polypeptide|length=191bp
MASPQASNKKARNTMLRIGGPPARPFGAGRRGAPGDGAFLFGRNAKTRVN
RLFTVHALIMLAVGLVSASFPEVLVYILHHNAEGFHARHEGGAARIAFVT
MRVFGCFLLAQAYVLYVVRTVSDGTMRRAVVQSYFVAFFLTTIALTRAQL
TEDMPVRTSNWLVISIFAVLTAAYAWYSFFERISVFELGR*
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Synonyms
Publications