NO07G02260, NO07G02260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_015877321.1 (PREDICTED: syntaxin-81 [Ziziphus jujuba]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 96/309 (31.07%), Postives = 146/309 (47.25%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PFT+ A + LESI A E+ +++ R YVD +R TEQERD ++ +++FI C QI+I++ ++ + + + G + +AH GVV L ER L S+ +Q KL+AI F + SR P R+ +T S S S NL + Q L+V++ LL E R L V L + L+ V+ E KM+E+S L L + +L+Q Q+E+++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 46 PFTRAALKTLESIGALEQFMLKHRKDYVDLHR--------TTEQERDSIEHEVSAFIKACQEQIDILKNSINDEEA-NSKGWLGIRDKSNADTIAHKHGVVLSLTER-------LHSVTAQFDKLRAI-RFQ-----DAISRAMP-RRKFNRITNSSSADTSKSNNLELREPDQ--FQPEPLKVQQQ------------------------LLDDETRALQVELTSMLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEQLYEQAVEATTNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLD 305
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016574859.1 (PREDICTED: syntaxin-81-like isoform X1 [Capsicum annuum]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 92/308 (29.87%), Postives = 146/308 (47.40%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT+ + LESI E+ L++ + YVD +R TEQERD ++ + F+ C QI+++R ++ E + G + +AH GVV L+E+ L S+ SQ +L+AI F + +R TP ++R + T ++ S S +L K + + + +A RV + LL E R L V LN+ L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 105 FTRATLKTLESIGTLEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTIFVKSCKEQIDVLRNSINEEDANSKGWLGLKGDNLNADTVAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----DAINRVTP-RKKRKNTTKSNATEISASSSLDPDMKRDSEVR----DADVSQAVPIRVQEQ--------------LLDDETRALQVELNSLLDSVQETETKMVEVSALNHLMSTHVLQQAQQIELLYEQAVEATQNVALGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLD 372
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016574860.1 (PREDICTED: syntaxin-81-like isoform X2 [Capsicum annuum] >XP_016574861.1 PREDICTED: syntaxin-81-like isoform X2 [Capsicum annuum] >XP_016574862.1 PREDICTED: syntaxin-81-like isoform X2 [Capsicum annuum]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 92/308 (29.87%), Postives = 146/308 (47.40%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT+ + LESI E+ L++ + YVD +R TEQERD ++ + F+ C QI+++R ++ E + G + +AH GVV L+E+ L S+ SQ +L+AI F + +R TP ++R + T ++ S S +L K + + + +A RV + LL E R L V LN+ L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 100 FTRATLKTLESIGTLEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTIFVKSCKEQIDVLRNSINEEDANSKGWLGLKGDNLNADTVAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----DAINRVTP-RKKRKNTTKSNATEISASSSLDPDMKRDSEVR----DADVSQAVPIRVQEQ--------------LLDDETRALQVELNSLLDSVQETETKMVEVSALNHLMSTHVLQQAQQIELLYEQAVEATQNVALGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLD 367
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016574863.1 (PREDICTED: syntaxin-81-like isoform X3 [Capsicum annuum] >PHT79153.1 Syntaxin-81 [Capsicum annuum]) HSP 1 Score: 96.7 bits (239), Expect = 1.600e-16 Identity = 92/308 (29.87%), Postives = 146/308 (47.40%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT+ + LESI E+ L++ + YVD +R TEQERD ++ + F+ C QI+++R ++ E + G + +AH GVV L+E+ L S+ SQ +L+AI F + +R TP ++R + T ++ S S +L K + + + +A RV + LL E R L V LN+ L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 47 FTRATLKTLESIGTLEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTIFVKSCKEQIDVLRNSINEEDANSKGWLGLKGDNLNADTVAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----DAINRVTP-RKKRKNTTKSNATEISASSSLDPDMKRDSEVR----DADVSQAVPIRVQEQ--------------LLDDETRALQVELNSLLDSVQETETKMVEVSALNHLMSTHVLQQAQQIELLYEQAVEATQNVALGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLD 314
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_002446837.1 (syntaxin-81 [Sorghum bicolor] >EES11165.1 hypothetical protein SORBI_3006G157400 [Sorghum bicolor]) HSP 1 Score: 96.3 bits (238), Expect = 2.100e-16 Identity = 93/313 (29.71%), Postives = 143/313 (45.69%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVG--GDGSRL---AHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT A + LESIR E +++ R YVD +R TEQERD ++ + F+ C QI+I++ + E E G +G + SRL AH GVV L+ERL + L+S R + + +R P R+++ P P+ NL VL ++ + E + +E+ LL E + L V L + L+ V+ E KM+E+S L L + +L+Q QV+ +++ A A NNV + N EL + RNS + +L F FVL ++L LD Sbjct: 47 FTNAAIKTLESIRELERFIVKHRRDYVDLHR--------TTEQERDNIEHEIGVFVKACKEQIDILKNRIHE---EEKNGSGKTWLGTRDESSRLDLIAHQHGVVLILSERLHSVTAQFDRLRSMRFQ-------------DAINRAMP--RKKILKRPEIKPAEPSKSNL--------VLKSDVSKIVDQEVSPAPMRVQEQ------------LLDDETKALQVELTSLLDAVQETETKMIEMSALNHLMSTHVLQQAQQVQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 313
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_008375891.1 (PREDICTED: syntaxin-81 [Malus domestica] >XP_008375892.1 PREDICTED: syntaxin-81 [Malus domestica] >XP_017188570.1 PREDICTED: syntaxin-81 [Malus domestica]) HSP 1 Score: 95.9 bits (237), Expect = 2.800e-16 Identity = 89/309 (28.80%), Postives = 141/309 (45.63%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PFT+ A + LESI E+ +++ R YVD +R TEQERD ++ +++FI C QI++++ ++ + + G T + +AH GVV L+ERL H++ S Q R ++ S ++ TP R+ + S S S N LE+ E F ++ LL E R L V L L+ V+ E KM E+S L L + +L+Q Q+E++++ A A NV N E+ + RNS + +L F+FVL ++L LD Sbjct: 46 PFTRAALKTLESIGTLEQFMLKHRKDYVDLHR--------TTEQERDSIEHEVSTFIKACQEQIDVLKNSINDDEANSKGWLGIRTDYSNADTIAHKHGVVLILSERL----HSVTSRFDQLRAIRI---------QDSINKATP-RRKLKRIKTTESADTSNSNN---------------LELREPNEFQPEPLTVQQ-----------QLLDDETRALQVELTGLLDAVQETETKMAEMSALNHLMSTHVLQQAHQIEQLYDQAVEATTNVEFGNKEISKAIQRNSSSRTFLLLFLFVLTFSILFLD 306
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_002891655.1 (syntaxin-81 [Arabidopsis lyrata subsp. lyrata] >EFH67914.1 hypothetical protein ARALYDRAFT_892151 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-16 Identity = 86/313 (27.48%), Postives = 145/313 (46.33%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLT----QSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PFT+ A + L+SI+ E+ +++ R YVD +R TEQE+D ++Q + +FI C QI+I++ ++ + G + +AH GVV L+E+L + T Q Q + + + I+ +R P + + + ++A P++T ++ +E +A RRV ++ LL E + L V L+N L+ R E KM+E+S L L +L+Q Q+E +++ A A NV N EL + RNS + +L F FVL ++L LD Sbjct: 46 PFTKAAFKTLDSIKELEQFMLKHRKDYVDLHR--------TTEQEKDSIEQEITAFIKACKEQIDILKNSIRNEEANSKGWLGLPADNFNADTIAHKHGVVLILSEKLHSV--TAQFDQLRATRFQDII-----------NRAMPRRKPKRII-----------------KEANPIITTLANSESIKPDEIQAQPRRVQQQQ-------------LLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIELLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 307
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016570222.1 (PREDICTED: syntaxin-81-like isoform X1 [Capsicum annuum] >PHT61071.1 Syntaxin-81 [Capsicum annuum]) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-16 Identity = 91/308 (29.55%), Postives = 148/308 (48.05%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT+ A + LESI E+ L++ + YVD +R TEQERD ++ + F+ C QI+++R ++ E + G + +AH GVV L+E+ L S+ SQ +L+AI F + +R TP ++R + T ++ S S +L P + + + D + + +E+ LL E R L V LN+ L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL +++ LD Sbjct: 123 FTRAALKTLESIGTVEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTIFVKSCKEQIDVLRNSINEEDANSKGWLGLKGDNLNADTVAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----HAINRVTP-RKKRKNTTKSNATEISASSSL------DPDMNRDSEVRDTDVSQAAPIRVQEQ------------LLDDETRALQVELNSLLDSVQETETKMVEVSALNHLMSTHVLQQAQQIELLYEQAVEATQNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIVFLD 390
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016570223.1 (PREDICTED: syntaxin-81-like isoform X2 [Capsicum annuum]) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-16 Identity = 91/308 (29.55%), Postives = 148/308 (48.05%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT+ A + LESI E+ L++ + YVD +R TEQERD ++ + F+ C QI+++R ++ E + G + +AH GVV L+E+ L S+ SQ +L+AI F + +R TP ++R + T ++ S S +L P + + + D + + +E+ LL E R L V LN+ L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL +++ LD Sbjct: 47 FTRAALKTLESIGTVEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTIFVKSCKEQIDVLRNSINEEDANSKGWLGLKGDNLNADTVAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----HAINRVTP-RKKRKNTTKSNATEISASSSL------DPDMNRDSEVRDTDVSQAAPIRVQEQ------------LLDDETRALQVELNSLLDSVQETETKMVEVSALNHLMSTHVLQQAQQIELLYEQAVEATQNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIVFLD 314
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_022939308.1 (syntaxin-81-like [Cucurbita moschata] >XP_022939309.1 syntaxin-81-like [Cucurbita moschata] >XP_023550252.1 syntaxin-81-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 95.5 bits (236), Expect = 3.600e-16 Identity = 90/310 (29.03%), Postives = 143/310 (46.13%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRR-VAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PF + A + LESI A EE +++ + YVD YR T+QERD ++ + +FI C Q++I++ + E + G + T + +AH GVV L+E+ L S+ SQ KL+AI R + + P+ + S N + E+ E + F + V A+++ LL E R L V L + L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL +++ LD Sbjct: 46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVTAFIKACQEQLDILKNNINEGDAHSKGWLGSRTDDSNADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-------------RFQDIISKAVPRRKPNQINKPRSAN---------TFAYNGTELREPDNFEHQPVRAQQQ------------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSIIFLD 306 The following BLAST results are available for this feature:
BLAST of NO07G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02260 ID=NO07G02260|Name=NO07G02260|organism=Nannochloropsis oceanica|type=gene|length=1814bpback to top protein sequence of NO07G02260.1 >NO07G02260.1-protein ID=NO07G02260.1-protein|Name=NO07G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
|