NO07G02260, NO07G02260 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of NO07G02260 vs. NCBI_GenBank
Match: EWM27197.1 (SNARE-complex protein Syntaxin-18 like protein [Nannochloropsis gaditana]) HSP 1 Score: 225.7 bits (574), Expect = 2.300e-55 Identity = 132/241 (54.77%), Postives = 163/241 (67.63%), Query Frame = 0 Query: 1 MDVTSTWRRAVSAAK-RTPATAXXXXXXXXXXXXXXXXSFSVSACPPR------GFITDPFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKL 235 MDVT W AV++A+ T A + + S S P + G ITDPFTQQAREVL+SIR KEE+L ++RG YVDPYRYVPSRA+ MT+ ERDQ+DQVMASFIIKCGSQIEI+RCALAEASS EAGGGNA VGG+GSRLAH+G VV+YLAERLQDLG+TLQ+LQ++RR L +VP S G + R P + R TP + A G S + K +P++ +K+ Sbjct: 1 MDVTDAWLAAVASARWTTKAASPGFPSSTCVKSRTAFATASTSTFPNKSADATHGIITDPFTQQAREVLDSIRTKEEILKKNRGRYVDPYRYVPSRAANMTDLERDQIDQVMASFIIKCGSQIEILRCALAEASSLEAGGGNADLVGGEGSRLAHHGKVVAYLAERLQDLGNTLQNLQARRRHLNGLVPSSSGADAGQACR--PGSTTRTLTTPSWNSFAKAGG--SHKAKGRPIMAPNKV 237
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_015620666.1 (PREDICTED: syntaxin-81 isoform X1 [Oryza sativa Japonica Group] >EEC68882.1 hypothetical protein OsI_37514 [Oryza sativa Indica Group] >EEE52789.1 hypothetical protein OsJ_35261 [Oryza sativa Japonica Group] >BAT15939.1 Os12g0154400 [Oryza sativa Japonica Group]) HSP 1 Score: 105.5 bits (262), Expect = 3.500e-19 Identity = 102/330 (30.91%), Postives = 154/330 (46.67%), Query Frame = 0 Query: 38 SFSVSACPPRGFITDPFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVG--GDGSRL---AHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCAR-RRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 SF + PP+ PFT+ A + LESIR E+ +++ R YVD +R TEQERD ++ ++ F+ C QI+I++ + E E GG +G + SRL AH GVV L+ERL + L++ R + + +R P R ++ T PS K VL +VE+ E T + +E+ LL E R L V L N L+ V+ E KM+E+S L L + +L+Q Q++ +++ A A NNV + N EL + RNS + +L F FVL ++L LD Sbjct: 35 SFIIRKPPPK----LPFTKAAIKTLESIRELEKFIVKHRKDYVDMHR--------TTEQERDNIEHEVSVFVKACKEQIDILKNRIHE----EKGGSTKTWLGTSDESSRLDLIAHQHGVVLILSERLHSVTAQFDRLRTMRFQ-------------DAINRAMPRKRIQKKRETKAAEPS-----------KPNLVLKSDVSKVEDQEVSTAPLRVQEQ------------LLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 312
BLAST of NO07G02260 vs. NCBI_GenBank
Match: KFK35826.1 (hypothetical protein AALP_AA4G042200 [Arabis alpina]) HSP 1 Score: 100.9 bits (250), Expect = 8.600e-18 Identity = 93/309 (30.10%), Postives = 146/309 (47.25%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PFT+ A + LESI+ ++ +++ R YVD +R TEQE+D ++Q + +FI C QI+I++ ++ + G A + +AH GVV L+E+L + T Q Q + + + I+ +R P RR PS SG+ L P+ +E +E +A RRV ++ LL E + L V L+N L+ R E KM+E+S L L +L+Q Q+E +++ A A NV N EL + RNS + +L F FVL ++L LD Sbjct: 46 PFTKAAFKTLESIKELDQFMLKHRKDYVDLHR--------TTEQEKDSIEQEITAFIKACKEQIDILKNSIRNEETNSKGWLGLAADNFNTDTIAHKHGVVLILSEKLHSV--TAQFDQLRATRFQDII-----------NRAMP---RRKPKRIIKEPSPSGNATL-------PI--PESIEPDEIQAQPRRVQQQQ-------------LLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 308
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016471298.1 (PREDICTED: syntaxin-81-like isoform X2 [Nicotiana tabacum]) HSP 1 Score: 100.1 bits (248), Expect = 1.500e-17 Identity = 95/308 (30.84%), Postives = 150/308 (48.70%), Query Frame = 0 Query: 54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 FT+ A + LESI A E+ L++ + YVD +R TEQERD ++ + F+ C QI++++ ++ E ++ G + +AH GVV L+E+ L S+ SQ +L+AI F + +R TP R+R + T ++ S S +L K + S D + V +E+ LL E R L V LN+ L+ V+ +E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 10 FTRAAVKTLESIGALEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTVFVKSCKEQIDVLKNSINEENAHSKGWLGFKGDNLNADTIAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----DAINRVTP-RRKRKNSTKSNAAETSVSSSLDPDMKRDSEIRDS------DISQAAPVRVQEQ------------LLDDETRALQVELNSLLDSVQEIETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLD 277
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_008441427.1 (PREDICTED: syntaxin-81 [Cucumis melo] >XP_008441428.1 PREDICTED: syntaxin-81 [Cucumis melo]) HSP 1 Score: 99.8 bits (247), Expect = 1.900e-17 Identity = 94/309 (30.42%), Postives = 147/309 (47.57%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PF + A + LESI A EE +++ + YVD YR T+QERD ++ +A+FI C Q++I++ ++ E + G T + +AH GVV L+E+ L S+ SQ KL+AI F S+ P RR+++ +++ R A S E+ E + F + ++ LL E R L V L + L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVAAFIKACQEQLDILKNSINEDDAHSKGWLGPRTDDSNADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-RFQ-----DIISKAVP--RRKLN-------------QVNKPRSAN-TTEYSNTELREPDNFEHQPVRAQQ------------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEYLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLD 305
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_022133683.1 (syntaxin-81 [Momordica charantia]) HSP 1 Score: 99.4 bits (246), Expect = 2.500e-17 Identity = 94/309 (30.42%), Postives = 142/309 (45.95%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PF + A + LESI A EE +++ + YVD YR T+QERD ++ + +FI C QI+I++ + E + G + +AH GVV L+ER L S+ SQ KL+AI F ++ P R+ +T PHS + L S E+ E F ++ + LL E R L V L + L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + ++ F+FVL ++L LD Sbjct: 46 PFVKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVTAFIKACQEQIDILKNNINEDETHSKGWLGVRADDANADTIAHKHGVVLILSER-------LHSVTSQFDKLRAI-RFQ-----DIINKAVP-RRKPNQVTKPHSAN---------------TLEYSNTELREPNNFEHEPVRAQQQQ----------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFVLTFSILFLD 307
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_004138436.1 (PREDICTED: syntaxin-81 [Cucumis sativus] >XP_011656400.1 PREDICTED: syntaxin-81 [Cucumis sativus] >KGN45766.1 hypothetical protein Csa_6G009450 [Cucumis sativus]) HSP 1 Score: 98.6 bits (244), Expect = 4.300e-17 Identity = 93/309 (30.10%), Postives = 143/309 (46.28%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PF + A + LESI A EE +++ + YVD YR T+QERD ++ +A+FI C Q++I++ ++ E + G T + +AH GVV L+E+ L S+ SQ KL+AI F S+ P R+ + P S + N E+ E + F + ++ LL E R L V L + L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVAAFIKACQEQLDILKNSINEDDAHSKGWLGPRTDDSNADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-RFQ-----DIISKAVP-RRKLNQVNKPRSANTPEYNN---------------TELREPDNFEHQPVRAQQ------------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLD 305
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_009350599.1 (PREDICTED: syntaxin-81-like [Pyrus x bretschneideri] >XP_009350600.1 PREDICTED: syntaxin-81-like [Pyrus x bretschneideri] >XP_018501749.1 PREDICTED: syntaxin-81-like [Pyrus x bretschneideri]) HSP 1 Score: 97.8 bits (242), Expect = 7.300e-17 Identity = 89/309 (28.80%), Postives = 142/309 (45.95%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PFT+ A + LESI E+ +++ R YVD +R TEQERD ++ +++FI C QI++++ ++ + + G T + +AH G V L+ERL H++ S Q R ++ S ++TTP R+ + S S S N LE+ E F ++ LL E R L V L L+ V+ E KM+E+S L L + +L+Q Q+E++++ A A NV N E+ + RNS + +L F+FVL ++L LD Sbjct: 46 PFTRAALKTLESIGTLEQFMLKHRKDYVDLHR--------TTEQERDSIEHEVSTFIKACQEQIDVLKNSINDDEAKSKGWLGIRTDYSNADTIAHKHGAVLILSERL----HSVTSRFDQLRAIRI---------QDSINKTTP-RRKLKRIKTTESADTSNSNN---------------LELREPNEFQPEPLTVQQ-----------QLLDDETRALQVELTGLLDAVQETETKMVEMSALNHLMSTHVLQQAHQIEQLYDQAVEATTNVELGNKEISKAIQRNSSSRTFLLLFLFVLTFSILFLD 306
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_018440268.1 (PREDICTED: syntaxin-81 [Raphanus sativus]) HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16 Identity = 89/309 (28.80%), Postives = 144/309 (46.60%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PFT+ A + LESI+ ++ +++ R YVD +R TE E+D ++Q + +FI C QI++++ ++ S G A + +AH GVV L+E+L + T Q Q + + + I+ +R P R+ +T +P + LS + +P E EA RR+ ++ LL E + L V L+N L+ R E KM+E+S L L +L+Q Q+E +++ A A NV N EL + RNS + +L F FVL ++L LD Sbjct: 46 PFTRAALKTLESIKELDQFMMKHRKDYVDMHR--------TTEHEKDSIEQEITAFIKACKEQIDVLKNSIRNEESNSKGWLGLAADNFNADTIAHKHGVVLILSEKLHSV--TAQFDQLRATRFQDII-----------NRAMP-RRKPKRVTKEATPL---NATLSNNKSVEP--------DEIQEAQPRRLQQQQ-------------LLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEVLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 308
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_022990738.1 (syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990739.1 syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990740.1 syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990742.1 syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990743.1 syntaxin-81-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16 Identity = 95/310 (30.65%), Postives = 146/310 (47.10%), Query Frame = 0 Query: 53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRR-VAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362 PF + A + LESI A EE +++ + YVD YR T+QERD ++ + +FI C QI+I++ + E + A T + +AH GVV L+E+ L S+ SQ KL+AI F ++ P R+ + P S +A N +E+ E + F + V A+++ LL E R L V L + L+ V+ E KM+E+S L L + +L+Q Q+E ++E A A NV N EL + RNS + +L F+FVL ++L LD Sbjct: 46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVTAFIKACQEQIDILKNNINEDDAHSKSWLGARTDDANADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-RFQ-----DIINKAVP-RRKPNQVNKPRSANAPNYNN---------------MELREPDNFEHQPVRAQQQ------------LLDDETRALQVELTSLLDAVQEAETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELAHAIQRNSSSRTFLLLFLFVLTFSILFLD 306 The following BLAST results are available for this feature:
BLAST of NO07G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02260 ID=NO07G02260|Name=NO07G02260|organism=Nannochloropsis oceanica|type=gene|length=1814bpback to top protein sequence of NO07G02260.1 >NO07G02260.1-protein ID=NO07G02260.1-protein|Name=NO07G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bpback to top Synonyms
Publications
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