NO07G02260, NO07G02260 (gene) Nannochloropsis oceanica

Overview
NameNO07G02260
Unique NameNO07G02260
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1814
Alignment locationchr7:673052..674865 +

Link to JBrowse

Properties
Property NameValue
DescriptionSNARE-complex protein Syntaxin-18 like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:673052..674865 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO07G02260 vs. NCBI_GenBank
Match: EWM27197.1 (SNARE-complex protein Syntaxin-18 like protein [Nannochloropsis gaditana])

HSP 1 Score: 225.7 bits (574), Expect = 2.300e-55
Identity = 132/241 (54.77%), Postives = 163/241 (67.63%), Query Frame = 0
Query:    1 MDVTSTWRRAVSAAK-RTPATAXXXXXXXXXXXXXXXXSFSVSACPPR------GFITDPFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKL 235
            MDVT  W  AV++A+  T A +                + S S  P +      G ITDPFTQQAREVL+SIR KEE+L ++RG YVDPYRYVPSRA+ MT+ ERDQ+DQVMASFIIKCGSQIEI+RCALAEASS EAGGGNA  VGG+GSRLAH+G VV+YLAERLQDLG+TLQ+LQ++RR L  +VP S G     + R  P +  R   TP  +  A   G  S + K +P++  +K+
Sbjct:    1 MDVTDAWLAAVASARWTTKAASPGFPSSTCVKSRTAFATASTSTFPNKSADATHGIITDPFTQQAREVLDSIRTKEEILKKNRGRYVDPYRYVPSRAANMTDLERDQIDQVMASFIIKCGSQIEILRCALAEASSLEAGGGNADLVGGEGSRLAHHGKVVAYLAERLQDLGNTLQNLQARRRHLNGLVPSSSGADAGQACR--PGSTTRTLTTPSWNSFAKAGG--SHKAKGRPIMAPNKV 237          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_015620666.1 (PREDICTED: syntaxin-81 isoform X1 [Oryza sativa Japonica Group] >EEC68882.1 hypothetical protein OsI_37514 [Oryza sativa Indica Group] >EEE52789.1 hypothetical protein OsJ_35261 [Oryza sativa Japonica Group] >BAT15939.1 Os12g0154400 [Oryza sativa Japonica Group])

HSP 1 Score: 105.5 bits (262), Expect = 3.500e-19
Identity = 102/330 (30.91%), Postives = 154/330 (46.67%), Query Frame = 0
Query:   38 SFSVSACPPRGFITDPFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVG--GDGSRL---AHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCAR-RRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            SF +   PP+     PFT+ A + LESIR  E+ +++ R  YVD +R         TEQERD ++  ++ F+  C  QI+I++  + E    E GG     +G   + SRL   AH  GVV  L+ERL  +      L++ R +              + +R  P  R ++   T    PS           K   VL     +VE+ E  T  +  +E+            LL  E R L V L N L+ V+  E KM+E+S L  L +  +L+Q  Q++ +++ A  A NNV + N EL   + RNS +   +L F FVL  ++L LD
Sbjct:   35 SFIIRKPPPK----LPFTKAAIKTLESIRELEKFIVKHRKDYVDMHR--------TTEQERDNIEHEVSVFVKACKEQIDILKNRIHE----EKGGSTKTWLGTSDESSRLDLIAHQHGVVLILSERLHSVTAQFDRLRTMRFQ-------------DAINRAMPRKRIQKKRETKAAEPS-----------KPNLVLKSDVSKVEDQEVSTAPLRVQEQ------------LLDDETRALQVELTNLLDAVQETETKMIEMSALNHLMSTHVLQQAQQIQYLYDQAVEATNNVERGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 312          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: KFK35826.1 (hypothetical protein AALP_AA4G042200 [Arabis alpina])

HSP 1 Score: 100.9 bits (250), Expect = 8.600e-18
Identity = 93/309 (30.10%), Postives = 146/309 (47.25%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PFT+ A + LESI+  ++ +++ R  YVD +R         TEQE+D ++Q + +FI  C  QI+I++ ++    +   G    A    +   +AH  GVV  L+E+L  +  T Q  Q +  + + I+           +R  P   RR        PS SG+  L       P+     +E +E +A  RRV  ++             LL  E + L V L+N L+  R  E KM+E+S L  L    +L+Q  Q+E +++ A  A  NV   N EL   + RNS +   +L F FVL  ++L LD
Sbjct:   46 PFTKAAFKTLESIKELDQFMLKHRKDYVDLHR--------TTEQEKDSIEQEITAFIKACKEQIDILKNSIRNEETNSKGWLGLAADNFNTDTIAHKHGVVLILSEKLHSV--TAQFDQLRATRFQDII-----------NRAMP---RRKPKRIIKEPSPSGNATL-------PI--PESIEPDEIQAQPRRVQQQQ-------------LLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEFLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 308          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_016471298.1 (PREDICTED: syntaxin-81-like isoform X2 [Nicotiana tabacum])

HSP 1 Score: 100.1 bits (248), Expect = 1.500e-17
Identity = 95/308 (30.84%), Postives = 150/308 (48.70%), Query Frame = 0
Query:   54 FTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            FT+ A + LESI A E+ L++ +  YVD +R         TEQERD ++  +  F+  C  QI++++ ++ E ++   G         +   +AH  GVV  L+E+       L S+ SQ  +L+AI  F       + +R TP  R+R + T  ++   S S +L    K    +  S      D +    V  +E+            LL  E R L V LN+ L+ V+ +E KM+E+S L  L +  +L+Q  Q+E ++E A  A  NV   N EL   + RNS +   +L F+FVL  ++L LD
Sbjct:   10 FTRAAVKTLESIGALEQFLMKHKKDYVDLHR--------TTEQERDSIEHEVTVFVKSCKEQIDVLKNSINEENAHSKGWLGFKGDNLNADTIAHKHGVVLILSEK-------LHSVTSQFDQLRAI-RFQ-----DAINRVTP-RRKRKNSTKSNAAETSVSSSLDPDMKRDSEIRDS------DISQAAPVRVQEQ------------LLDDETRALQVELNSLLDSVQEIETKMVEMSALNHLMSTHVLQQAQQIELLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFLFVLTFSILFLD 277          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_008441427.1 (PREDICTED: syntaxin-81 [Cucumis melo] >XP_008441428.1 PREDICTED: syntaxin-81 [Cucumis melo])

HSP 1 Score: 99.8 bits (247), Expect = 1.900e-17
Identity = 94/309 (30.42%), Postives = 147/309 (47.57%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PF + A + LESI A EE +++ +  YVD YR         T+QERD ++  +A+FI  C  Q++I++ ++ E  +   G     T   +   +AH  GVV  L+E+       L S+ SQ  KL+AI  F         S+  P  RR+++              +++ R A      S  E+ E + F  +    ++            LL  E R L V L + L+ V+  E KM+E+S L  L +  +L+Q  Q+E ++E A  A  NV   N EL   + RNS +   +L F+FVL  ++L LD
Sbjct:   46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVAAFIKACQEQLDILKNSINEDDAHSKGWLGPRTDDSNADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-RFQ-----DIISKAVP--RRKLN-------------QVNKPRSAN-TTEYSNTELREPDNFEHQPVRAQQ------------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEYLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLD 305          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_022133683.1 (syntaxin-81 [Momordica charantia])

HSP 1 Score: 99.4 bits (246), Expect = 2.500e-17
Identity = 94/309 (30.42%), Postives = 142/309 (45.95%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PF + A + LESI A EE +++ +  YVD YR         T+QERD ++  + +FI  C  QI+I++  + E  +   G         +   +AH  GVV  L+ER       L S+ SQ  KL+AI  F         ++  P  R+   +T PHS +                L  S  E+ E   F       ++ +          LL  E R L V L + L+ V+  E KM+E+S L  L +  +L+Q  Q+E ++E A  A  NV   N EL   + RNS +   ++ F+FVL  ++L LD
Sbjct:   46 PFVKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVTAFIKACQEQIDILKNNINEDETHSKGWLGVRADDANADTIAHKHGVVLILSER-------LHSVTSQFDKLRAI-RFQ-----DIINKAVP-RRKPNQVTKPHSAN---------------TLEYSNTELREPNNFEHEPVRAQQQQ----------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFVLTFSILFLD 307          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_004138436.1 (PREDICTED: syntaxin-81 [Cucumis sativus] >XP_011656400.1 PREDICTED: syntaxin-81 [Cucumis sativus] >KGN45766.1 hypothetical protein Csa_6G009450 [Cucumis sativus])

HSP 1 Score: 98.6 bits (244), Expect = 4.300e-17
Identity = 93/309 (30.10%), Postives = 143/309 (46.28%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PF + A + LESI A EE +++ +  YVD YR         T+QERD ++  +A+FI  C  Q++I++ ++ E  +   G     T   +   +AH  GVV  L+E+       L S+ SQ  KL+AI  F         S+  P  R+   +  P S +     N                E+ E + F  +    ++            LL  E R L V L + L+ V+  E KM+E+S L  L +  +L+Q  Q+E ++E A  A  NV   N EL   + RNS +   +L F+FVL  ++L LD
Sbjct:   46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVAAFIKACQEQLDILKNSINEDDAHSKGWLGPRTDDSNADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-RFQ-----DIISKAVP-RRKLNQVNKPRSANTPEYNN---------------TELREPDNFEHQPVRAQQ------------LLDDETRALQVELTSLLDAVQETETKMVEMSALNHLMSTHVLQQAQQIEHLYEQAVEATKNVELGNKELTQAIQRNSSSRTFLLLFLFVLTFSILFLD 305          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_009350599.1 (PREDICTED: syntaxin-81-like [Pyrus x bretschneideri] >XP_009350600.1 PREDICTED: syntaxin-81-like [Pyrus x bretschneideri] >XP_018501749.1 PREDICTED: syntaxin-81-like [Pyrus x bretschneideri])

HSP 1 Score: 97.8 bits (242), Expect = 7.300e-17
Identity = 89/309 (28.80%), Postives = 142/309 (45.95%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PFT+ A + LESI   E+ +++ R  YVD +R         TEQERD ++  +++FI  C  QI++++ ++ +  +   G     T   +   +AH  G V  L+ERL    H++ S   Q R ++            S ++TTP  R+   +    S   S S N               LE+ E   F       ++            LL  E R L V L   L+ V+  E KM+E+S L  L +  +L+Q  Q+E++++ A  A  NV   N E+   + RNS +   +L F+FVL  ++L LD
Sbjct:   46 PFTRAALKTLESIGTLEQFMLKHRKDYVDLHR--------TTEQERDSIEHEVSTFIKACQEQIDVLKNSINDDEAKSKGWLGIRTDYSNADTIAHKHGAVLILSERL----HSVTSRFDQLRAIRI---------QDSINKTTP-RRKLKRIKTTESADTSNSNN---------------LELREPNEFQPEPLTVQQ-----------QLLDDETRALQVELTGLLDAVQETETKMVEMSALNHLMSTHVLQQAHQIEQLYDQAVEATTNVELGNKEISKAIQRNSSSRTFLLLFLFVLTFSILFLD 306          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_018440268.1 (PREDICTED: syntaxin-81 [Raphanus sativus])

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16
Identity = 89/309 (28.80%), Postives = 144/309 (46.60%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PFT+ A + LESI+  ++ +++ R  YVD +R         TE E+D ++Q + +FI  C  QI++++ ++    S   G    A    +   +AH  GVV  L+E+L  +  T Q  Q +  + + I+           +R  P  R+   +T   +P    +  LS  +  +P         E  EA  RR+  ++             LL  E + L V L+N L+  R  E KM+E+S L  L    +L+Q  Q+E +++ A  A  NV   N EL   + RNS +   +L F FVL  ++L LD
Sbjct:   46 PFTRAALKTLESIKELDQFMMKHRKDYVDMHR--------TTEHEKDSIEQEITAFIKACKEQIDVLKNSIRNEESNSKGWLGLAADNFNADTIAHKHGVVLILSEKLHSV--TAQFDQLRATRFQDII-----------NRAMP-RRKPKRVTKEATPL---NATLSNNKSVEP--------DEIQEAQPRRLQQQQ-------------LLDDETQALQVELSNLLDGARQTETKMVEMSALNHLMATHVLQQAQQIEVLYDQAVEATKNVELGNKELSQAIQRNSSSRTFLLLFFFVLTFSVLFLD 308          
BLAST of NO07G02260 vs. NCBI_GenBank
Match: XP_022990738.1 (syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990739.1 syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990740.1 syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990742.1 syntaxin-81-like isoform X1 [Cucurbita maxima] >XP_022990743.1 syntaxin-81-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 97.1 bits (240), Expect = 1.200e-16
Identity = 95/310 (30.65%), Postives = 146/310 (47.10%), Query Frame = 0
Query:   53 PFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQVDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYGGVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCARRRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRR-VAAREEGRXXXXXXXXXVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLFTGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFVFVLCIALLILD 362
            PF + A + LESI A EE +++ +  YVD YR         T+QERD ++  + +FI  C  QI+I++  + E  +       A T   +   +AH  GVV  L+E+       L S+ SQ  KL+AI  F         ++  P  R+   +  P S +A    N               +E+ E + F  + V A+++            LL  E R L V L + L+ V+  E KM+E+S L  L +  +L+Q  Q+E ++E A  A  NV   N EL   + RNS +   +L F+FVL  ++L LD
Sbjct:   46 PFIKAALKTLESIGALEEFMLKHQKDYVDMYR--------TTDQERDNIEHEVTAFIKACQEQIDILKNNINEDDAHSKSWLGARTDDANADTIAHKHGVVLILSEK-------LHSVTSQFDKLRAI-RFQ-----DIINKAVP-RRKPNQVNKPRSANAPNYNN---------------MELREPDNFEHQPVRAQQQ------------LLDDETRALQVELTSLLDAVQEAETKMVEMSALNHLMSTHVLQQAQQIEFLYEQAVEATKNVELGNKELAHAIQRNSSSRTFLLLFLFVLTFSILFLD 306          
The following BLAST results are available for this feature:
BLAST of NO07G02260 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27197.12.300e-5554.77SNARE-complex protein Syntaxin-18 like protein [Na... [more]
XP_015620666.13.500e-1930.91PREDICTED: syntaxin-81 isoform X1 [Oryza sativa Ja... [more]
KFK35826.18.600e-1830.10hypothetical protein AALP_AA4G042200 [Arabis alpin... [more]
XP_016471298.11.500e-1730.84PREDICTED: syntaxin-81-like isoform X2 [Nicotiana ... [more]
XP_008441427.11.900e-1730.42PREDICTED: syntaxin-81 [Cucumis melo] >XP_00844142... [more]
XP_022133683.12.500e-1730.42syntaxin-81 [Momordica charantia][more]
XP_004138436.14.300e-1730.10PREDICTED: syntaxin-81 [Cucumis sativus] >XP_01165... [more]
XP_009350599.17.300e-1728.80PREDICTED: syntaxin-81-like [Pyrus x bretschneider... [more]
XP_018440268.11.200e-1628.80PREDICTED: syntaxin-81 [Raphanus sativus][more]
XP_022990738.11.200e-1630.65syntaxin-81-like isoform X1 [Cucurbita maxima] >XP... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL096nonsL096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR134ngnoR134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000650NSK000650Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02260.1NO07G02260.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|564083gene_2552Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g80gene3392Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02260.1NO07G02260.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02260 ID=NO07G02260|Name=NO07G02260|organism=Nannochloropsis oceanica|type=gene|length=1814bp
ATGGACGTGACGAGTACATGGCGCAGAGCTGTGTCGGCAGCCAAGCGAAC
TCCTGCGACGGCGCCGCCTTTTTTGTCCTCGTCTTCCTCGTCCTCAATGC
ATGCTGCCGCCTCCTTCTCTGTGTCGGCTTGCCCACCACGAGGCTTCATT
ACCGACCCCTTCACGCAGCAGGCACGGGAAGTGTTGGAAAGCATTCGTGC
CAAAGAGGAAATGTTGATTCGGAGCCGAGGTCACTACGTGGACCCCTACC
GTTATGTGCCCTCAAGGGCCTCAGTCATGACGGAGCAAGAGCGGGATCAG
GTGGACCAGGTCATGGCTTCCTTCATCATCAAGTGCGGCTCTCAAATCGA
GATCATTCGCTGTGCACTTGCAGgtgagggtggaattgagagaggttgta
gaaaaacgtacgtatcattttatcaaattcaaattatatcataccaccca
gAGGCAAGCTCCCCAGAAGCGGGGGGCGGCAACGCGGCCACGGTTGGCGG
CGATGGTTCCCGGTTGGCACATTACGGAGGGGTTGTATCTTATCTTGCCG
AGgtacgtggatgatatgattgcatgagcaggctatagaatggcatgaaa
ttcttctagtttccgttcaatcactctgcttcctttccacaacccaccca
cagCGACTACAAGACCTGGGGCACACGCTGCAAAGTCTGCAATCCCAACG
CCGCAAGCTGAAAGCTATCGTGCCGTTTAGTGGTGGTTTTGGGGGCTCTT
CCTCGTCAAGAACCACACCTTGTGCAAGAAGAAGgtgagtggtgggttga
ctgtaagacaggctcatttgactctttttttttcttcctttttgaactcg
tgacccatacacgcacagAATGCACATGACGCCACCCCACAGTCCCTCTG
CCAGCGGCAGTGGCAATTTAAGCCGTCAACGGAAAGCACAGCCAGTCTTG
ACACAAAGCAAGgttcgtcgttcctgaagtatgactgtcatttatggata
aatgtgataagttcattcattcgcgaccgacatctaaatcattcctcatc
agcagctccatgcggtgattatgaccctttcgacaggatgatacttgact
gattgtattgaagctaccacttacctgccctcctcctctccctccaccca
acagCTGGAGGTGGAAGAAGATGAAGCCTTTACGCGGCGAGTGGCAGCAC
GAGAAGAAGGGAGAAACCGCCAGGAGCAGCAGCAGCGGCAGGTTTTGCTC
ACGCAGGAGAATCGAGTGCTAACAGTGCGGCTCAACAACGAGCTAGAAGA
CGTCCGgtgcgtgtagaaaagagtggcatatgctggttaggaaatcatag
gtttatgtatgggtgcatcccgattatcataagacaaacgtacactcctc
acattcagctttctgactccgaggcaaaagccttctggcgtattcacaaa
gattgatcgattgattgttttaatgattgattctttttttcatcgatatt
tgacctttacaaaatgccgattttaacctcccacctacatgatcatgttt
attcttcccgcacacagAATGATGGAAGGCAAGATGCTGGAACTCTCGCA
GCTATTAGGCCTCTTCACGGGCAAGCTTCTTGAGCAGCAGGATCAGGTCG
AGGAGATACATGAGGCGGCGCGCGGAGCACACAACAATGTGGGCCAGGCA
AACCACGAGCTCCTTTCGACGCTCGACCGCAACAGCAAGGCGAGTCAGAC
CATGCTCACATTCGTCTTTGTCCTTTGTATCGCCCTCCTCATCCTCGACC
AGGCCATTCCATAG
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protein sequence of NO07G02260.1

>NO07G02260.1-protein ID=NO07G02260.1-protein|Name=NO07G02260.1|organism=Nannochloropsis oceanica|type=polypeptide|length=366bp
MDVTSTWRRAVSAAKRTPATAPPFLSSSSSSSMHAAASFSVSACPPRGFI
TDPFTQQAREVLESIRAKEEMLIRSRGHYVDPYRYVPSRASVMTEQERDQ
VDQVMASFIIKCGSQIEIIRCALAEASSPEAGGGNAATVGGDGSRLAHYG
GVVSYLAERLQDLGHTLQSLQSQRRKLKAIVPFSGGFGGSSSSRTTPCAR
RRMHMTPPHSPSASGSGNLSRQRKAQPVLTQSKLEVEEDEAFTRRVAARE
EGRNRQEQQQRQVLLTQENRVLTVRLNNELEDVRMMEGKMLELSQLLGLF
TGKLLEQQDQVEEIHEAARGAHNNVGQANHELLSTLDRNSKASQTMLTFV
FVLCIALLILDQAIP*
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Synonyms
Publications