NO07G02170, NO07G02170 (gene) Nannochloropsis oceanica

Overview
NameNO07G02170
Unique NameNO07G02170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1299
Alignment locationchr7:646005..647303 -

Link to JBrowse

Properties
Property NameValue
DescriptionDelta-aminolevulinic acid dehydratase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:646005..647303 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004655porphobilinogen synthase activity
GO:0046872metal ion binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR001731ALAD
Homology
BLAST of NO07G02170 vs. NCBI_GenBank
Match: CAC36154.1 (ALA dehydratase [Laminaria digitata])

HSP 1 Score: 530.8 bits (1366), Expect = 4.000e-147
Identity = 260/368 (70.65%), Postives = 302/368 (82.07%), Query Frame = 0
Query:   64 SSGGAPATGPTSLGPLPPLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            S+ GA  T  TS+G     + +DP  G    +  N+    WV Q  RPRRNRKSEA+R M+RE +V P NFIYPLFIH+E ++ EI  MPG  R SL+ M+ EV E+W++GV+TFV+FPKV D LKTN   E +N  GIVPRA+ MIKE FP++ V TDVALDPYSDQGHDG+V +GKI+NDETI QL KQ +CQARAG+D+VAPSDMMDGRVGA+R ALDSEGFTDVSI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLDVI RL+++SNLPI+AYHVSGEYAM+KAA E+GWL+E+  VLETMTCFKRAG D ILTYYAK AA+WL EDGL
Sbjct:   48 SARGAKTT--TSMG----ADAYDPFSGPNAPLRRNNNNDAWVSQRPRPRRNRKSEAMRSMLREAVVRPANFIYPLFIHDEDFEVEIKPMPGCLRHSLSHMLKEVEEAWKFGVRTFVVFPKVPDQLKTNYADECHNPNGIVPRAVSMIKERFPDSIVCTDVALDPYSDQGHDGVVKDGKILNDETIMQLTKQVVCQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDVIQRLRESSNLPISAYHVSGEYAMMKAAVERGWLDERAAVLETMTCFKRAGADAILTYYAKDAARWLCEDGL 409          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: KOO35246.1 (ala dehydratase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 522.7 bits (1345), Expect = 1.100e-144
Identity = 253/334 (75.75%), Postives = 290/334 (86.83%), Query Frame = 0
Query:   98 NSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            N  G  WV Q ARPRRNRKSEAVR MVRE IV P NFIYPLFIH+ET +  I+SMPG +R SLA M+AE  +++++GV++FV+FPKV D+LKT  G EAYN  GIVPRA+ M+K++ P++ V TDVALDPYS  GHDGIV NGKI+ND TIEQLCKQ++ QARAG+D+VAPSDMMDGRVGA+R ALDSEGFT+VSI+AYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREA +EAALD  EGAD LMVKPG+PYLDVI RL+ ASNLPIAAYHVSGEYAMLKAAAE+GWL+EK V LET+TCF+RAG DIILTYYAKQAAKW+ EDG+
Sbjct:   64 NVMGNPWVEQRARPRRNRKSEAVRKMVREVIVTPANFIYPLFIHDETSNVAIASMPGCERHSLASMVAEAKDAYKWGVRSFVVFPKVPDALKTIRGEEAYNPNGIVPRAVSMLKQALPDSIVCTDVALDPYSAAGHDGIVENGKILNDATIEQLCKQSVMQARAGSDVVAPSDMMDGRVGAIRDALDSEGFTEVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAYIEAALDELEGADMLMVKPGLPYLDVIHRLRLASNLPIAAYHVSGEYAMLKAAAERGWLDEKKVCLETLTCFRRAGADIILTYYAKQAAKWICEDGM 397          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: CEM00004.1 (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 499.2 bits (1284), Expect = 1.300e-137
Identity = 236/333 (70.87%), Postives = 273/333 (81.98%), Query Frame = 0
Query:   98 NSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDG 431
            N+KG  WV Q  RPRRNRKS  +R MV+E IV P NFIYPLFIHE   D  I+SMPG  R S   ++ EV ++ QYGVKTF+LFPK+ D LK+N   E YN  G+VPR +  IK+ FPEA V TD+ALDPYSDQGHDG+V NG+I+ND TI QLCKQA CQARAG+D+VAPSDMMDGRVGA+R ALDSEG    SIMAYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREAL+E ALD +EGAD LMVKPGMPYLDV+LRL+ A++LP+A YHVSGEYAML+AA+E+GWL+EK  V+E MTCFKRAG DIILTY+AK  AKW+ +DG
Sbjct:   70 NNKGEPWVAQRNRPRRNRKSAVIRRMVQEAIVRPSNFIYPLFIHEGESDEAIASMPGCSRLSAGSVLKEVEDAMQYGVKTFILFPKIPDQLKSNYADECYNPEGLVPRTVRAIKDKFPEAMVCTDIALDPYSDQGHDGVVENGQILNDHTIAQLCKQAACQARAGSDVVAPSDMMDGRVGAIRDALDSEGHITTSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALIETALDVSEGADILMVKPGMPYLDVVLRLRAATDLPVAVYHVSGEYAMLRAASERGWLDEKKSVMEAMTCFKRAGADIILTYFAKNCAKWIAQDG 402          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: XP_005770875.1 (hypothetical protein EMIHUDRAFT_448062 [Emiliania huxleyi CCMP1516] >EOD18446.1 hypothetical protein EMIHUDRAFT_448062 [Emiliania huxleyi CCMP1516])

HSP 1 Score: 488.0 bits (1255), Expect = 3.000e-134
Identity = 248/389 (63.75%), Postives = 295/389 (75.84%), Query Frame = 0
Query:   62 ATSSGGAPATGPTSLGPLPPLEGFDPRGGNIP--AVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGRE-----ALLEAALDAAEGADFLMVKP--------------GMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVED 430
            A  S    A  P S  P   L G  P    +P   +   + G   V Q  RPRRNRKS AVR MVRE  + P NF+YPLFIH+   + EI+SMPG +R SL  M+AE  ++WQYGV++F+LFPKV+D LK+N G E+YN  GIVPRA+ MIKE+ PE+ V TD+ALDPYS  GHDGIV +GKI+ND+TIEQLCKQA+C ARAG+D VAPSDMMDGRVGA+R ALD+EGFTDVSI+AYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGRE     A +EA LD AEGAD L+VKP              G+PYLDV  RL+Q+++LP+AAYHVSGEY+MLKAAAE+GWL+E+ V LET+ CF+RAG DIILTYYAKQA+KWL+E+
Sbjct:   16 ARFSARGAAWSPRS--PSLSLTGVIPDIATVPEGVLSRTTSGRPLVDQRPRPRRNRKSAAVRRMVRETSLTPANFVYPLFIHDVAENAEIASMPGCERHSLPSMLAEAQDAWQYGVRSFILFPKVEDELKSNRGEESYNPEGIVPRAVRMIKEALPESIVFTDIALDPYSSMGHDGIVEDGKILNDDTIEQLCKQALCHARAGSDCVAPSDMMDGRVGAIRDALDAEGFTDVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREASAGRAYIEAELDEAEGADILLVKPGPPQTLAETTSSRSGLPYLDVAHRLRQSTSLPVAAYHVSGEYSMLKAAAERGWLDERKVALETLLCFRRAGADIILTYYAKQASKWLMEE 402          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: XP_005714477.1 (delta-aminolevulinic acid dehydratase (porphobilinogen synthase) [Chondrus crispus] >CDF34658.1 delta-aminolevulinic acid dehydratase (porphobilinogen synthase) [Chondrus crispus])

HSP 1 Score: 474.2 bits (1219), Expect = 4.400e-130
Identity = 229/352 (65.06%), Postives = 279/352 (79.26%), Query Frame = 0
Query:   90 GNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVL--------NGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFG-----DKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVE 429
            G +P +  N +G +WVPQ ARPRRNRK+E +R MVREN V P NFIYPLFIH + Y+ EIS+MPG +R SL  ++ EV E+   GVK+ +LFPK+ + +KTN   E YN  G++P+AI  IK  +P   V TDVALDPYSDQGHDG+V          G+I+NDET+EQLC+QA+CQARAGAD+VAPSDMMDGRVGA+R ALDS GFTDVS+++YTAKYASA+YGPFRDALDS P        +KKTYQ DPAN REAL+EAALD AEGAD LMVKPGMPYLD+I RLK A+NLPI+AYHVSGEYAM+KAAA++GWL+E++ VLE++ CF+RAG D ILTYYAKQAA+W+ E
Sbjct:   50 GPVPGLRVNDEGKIWVPQRARPRRNRKTEGLRSMVRENSVSPSNFIYPLFIHTKDYNEEISAMPGCERHSLESVLKEVGEAEALGVKSVILFPKIPEDVKTNAAEECYNPNGLIPKAISAIKSRYPNVAVWTDVALDPYSDQGHDGMVSADNRGDGGMGRILNDETVEQLCRQAVCQARAGADVVAPSDMMDGRVGAIRDALDSYGFTDVSLVSYTAKYASAFYGPFRDALDSAPRESSNAPPNKKTYQMDPANSREALIEAALDVAEGADMLMVKPGMPYLDIIHRLKAATNLPISAYHVSGEYAMMKAAAQRGWLDERESVLESLLCFRRAGADAILTYYAKQAAQWMHE 401          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: OSX78352.1 (hypothetical protein BU14_0111s0021 [Porphyra umbilicalis])

HSP 1 Score: 449.1 bits (1154), Expect = 1.500e-122
Identity = 228/387 (58.91%), Postives = 283/387 (73.13%), Query Frame = 0
Query:   62 ATSSGGAPATGPTSLGPLPP---LEGFDPRGGNIPA----VGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLN--------GKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFG-----DKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVE 429
            A ++G   A  P      PP   +     R   IPA    +  N +G V V Q ARPRRNRKSE +R MVREN+V P N IYPLF+H E  +  I SMPG  R ++  ++ EV E+   GV++ +LFPK+ + LKTN   E YN +G+VP  +  IK  +P+  V TDVALDPYSDQGHDG+V +        G+I+NDET+EQLC+QA+CQARAGAD+VAPSDMMDGRVGA+R ALD  GFTDVSI++YTAKYASA+YGPFRDALDS P        +KKTYQ DPAN REAL+EA+LD AEGAD LM+KPGMPYLD+I RL+ A++LP+AAYHVSGEYAM+KAAAE+GWL+E++ V+E++ CFKRAG D ILTYYAKQAA+W+ E
Sbjct:   30 AAAAGRLAARLPADKAGAPPPVSMTAASARDLAIPARSGLLSVNEEGTVHVQQRARPRRNRKSEGLRSMVRENVVTPANLIYPLFVHTEGENVPIPSMPGCVRHTVDSVLREVGEARALGVRSVILFPKIPEELKTNAADECYNPSGLVPTLVSTIKAKYPDVAVWTDVALDPYSDQGHDGMVSDDKRGDGGCGRIMNDETVEQLCRQALCQARAGADVVAPSDMMDGRVGAIRDALDGAGFTDVSIVSYTAKYASAFYGPFRDALDSAPRESSNAPRNKKTYQMDPANSREALIEASLDVAEGADMLMIKPGMPYLDIIRRLRDATDLPLAAYHVSGEYAMMKAAAERGWLDEREAVMESLLCFKRAGADAILTYYAKQAAEWMNE 416          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: XP_005840879.1 (hypothetical protein GUITHDRAFT_160911 [Guillardia theta CCMP2712] >EKX53899.1 hypothetical protein GUITHDRAFT_160911 [Guillardia theta CCMP2712])

HSP 1 Score: 446.8 bits (1148), Expect = 7.600e-122
Identity = 223/342 (65.20%), Postives = 262/342 (76.61%), Query Frame = 0
Query:  101 GGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESF-PEATVMTDVALDPYSDQGHDGIVL--------NGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFG-----DKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVE 429
            G +WVPQ ARPRRNRK+E +R MVREN V P NFIYPLF+H +  + +I SMPG +R +    + EV E+   GV   +LFPK+ + LK+N   E YN  G +P  I  IK  +     V TDVALDPYSDQGHDG+V          G+I+NDET+EQLC+QA+ QARAGAD+VAPSDMMDGR+GA+R ALDSEGFTDVSI+AYTAKYASA+YGPFRDALDS P        +KKTYQ DPAN REAL+EAALD+AEGAD LMVKPGMPYLD+I  LK  +NLPI+AYHVSGEYAMLKAAAE+GW+NE+DV LET+ CFKRAG D ILTYYAKQAA+WL E
Sbjct:   72 GDIWVPQRARPRRNRKNEGLRSMVRENRVEPANFIYPLFVHTKDSNEKIDSMPGCERHTEESCLREVGEAIAEGVSNVILFPKIPEGLKSNSADECYNPEGFIPSLISKIKGKYGGSVNVWTDVALDPYSDQGHDGMVSTDKRGDGGKGRILNDETVEQLCRQALAQARAGADVVAPSDMMDGRIGAIRDALDSEGFTDVSIVAYTAKYASAFYGPFRDALDSAPRESSNAPPNKKTYQMDPANSREALVEAALDSAEGADMLMVKPGMPYLDIIKLLKDNTNLPISAYHVSGEYAMLKAAAERGWVNERDVALETLLCFKRAGADAILTYYAKQAARWLNE 413          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: AAZ08385.1 (delta-aminolevulinic acid dehydratase isoform 3 [Toxoplasma gondii])

HSP 1 Score: 436.8 bits (1122), Expect = 7.800e-119
Identity = 212/346 (61.27%), Postives = 265/346 (76.59%), Query Frame = 0
Query:   87 PRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIV--LNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSH-PGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVED 430
            PRG     +  N+ G VW+P  ARPRRNRK+ AVR +V+EN+V P + IYPLF+H+E     I SMPGQ R S+  ++ EV E+  YG+K F+LFPKVDD LK+    E+YN  G++PRAI  +KE+FP+  ++ DVALDPYS  GHDG+V   +GKI+ND T+ QLCKQAI  ARAGAD+V PSDMMDGRV A+R +LD EG TD SI+AY+ KYAS++YGPFRDALDSH  G  DKKTYQ DP+N REA  EA  DA+EGAD LMVKPG+PYLDV+ ++++ S LP+ AYHVSGEYAMLKAAAEKG+++EKD VLE +  F+RAG D + TYYAK+AAKW+VED
Sbjct:  340 PRG----PLDNNNYGEVWLPIQARPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWMVED 681          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: 3OBK_A (Chain A, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_B Chain B, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_C Chain C, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_D Chain D, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_E Chain E, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_F Chain F, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_G Chain G, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen >3OBK_H Chain H, Crystal Structure Of Delta-Aminolevulinic Acid Dehydratase (Porphobilinogen Synthase) From Toxoplasma Gondii Me49 In Complex With The Reaction Product Porphobilinogen)

HSP 1 Score: 436.8 bits (1122), Expect = 7.800e-119
Identity = 212/346 (61.27%), Postives = 265/346 (76.59%), Query Frame = 0
Query:   87 PRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIV--LNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSH-PGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVED 430
            PRG     +  N+ G VW+P  ARPRRNRK+ AVR +V+EN+V P + IYPLF+H+E     I SMPGQ R S+  ++ EV E+  YG+K F+LFPKVDD LK+    E+YN  G++PRAI  +KE+FP+  ++ DVALDPYS  GHDG+V   +GKI+ND T+ QLCKQAI  ARAGAD+V PSDMMDGRV A+R +LD EG TD SI+AY+ KYAS++YGPFRDALDSH  G  DKKTYQ DP+N REA  EA  DA+EGAD LMVKPG+PYLDV+ ++++ S LP+ AYHVSGEYAMLKAAAEKG+++EKD VLE +  F+RAG D + TYYAK+AAKW+VED
Sbjct:    3 PRG----PLDNNNYGEVWLPIQARPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWMVED 344          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: XP_002369445.1 (parasite porphobilinogen synthase PBGS [Toxoplasma gondii ME49] >EPT31771.1 parasite porphobilinogen synthase PBGS [Toxoplasma gondii ME49])

HSP 1 Score: 436.8 bits (1122), Expect = 7.800e-119
Identity = 212/346 (61.27%), Postives = 265/346 (76.59%), Query Frame = 0
Query:   87 PRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIV--LNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSH-PGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVED 430
            PRG     +  N+ G VW+P  ARPRRNRK+ AVR +V+EN+V P + IYPLF+H+E     I SMPGQ R S+  ++ EV E+  YG+K F+LFPKVDD LK+    E+YN  G++PRAI  +KE+FP+  ++ DVALDPYS  GHDG+V   +GKI+ND T+ QLCKQAI  ARAGAD+V PSDMMDGRV A+R +LD EG TD SI+AY+ KYAS++YGPFRDALDSH  G  DKKTYQ DP+N REA  EA  DA+EGAD LMVKPG+PYLDV+ ++++ S LP+ AYHVSGEYAMLKAAAEKG+++EKD VLE +  F+RAG D + TYYAK+AAKW+VED
Sbjct:  305 PRG----PLDNNNYGEVWLPIQARPRRNRKNRAVRQLVQENLVKPSSLIYPLFVHDEETSVPIPSMPGQSRLSMEDLLKEVGEARSYGIKAFMLFPKVDDELKSVMAEESYNPDGLLPRAIMALKEAFPDVLLLADVALDPYSSMGHDGVVDEQSGKIVNDLTVHQLCKQAITLARAGADMVCPSDMMDGRVSAIRESLDMEGCTDTSILAYSCKYASSFYGPFRDALDSHMVGGTDKKTYQMDPSNSREAEREAEADASEGADMLMVKPGLPYLDVLAKIREKSKLPMVAYHVSGEYAMLKAAAEKGYISEKDTVLEVLKSFRRAGADAVATYYAKEAAKWMVED 646          
The following BLAST results are available for this feature:
BLAST of NO07G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
CAC36154.14.000e-14770.65ALA dehydratase [Laminaria digitata][more]
KOO35246.11.100e-14475.75ala dehydratase [Chrysochromulina sp. CCMP291][more]
CEM00004.11.300e-13770.87unnamed protein product [Vitrella brassicaformis C... [more]
XP_005770875.13.000e-13463.75hypothetical protein EMIHUDRAFT_448062 [Emiliania ... [more]
XP_005714477.14.400e-13065.06delta-aminolevulinic acid dehydratase (porphobilin... [more]
OSX78352.11.500e-12258.91hypothetical protein BU14_0111s0021 [Porphyra umbi... [more]
XP_005840879.17.600e-12265.20hypothetical protein GUITHDRAFT_160911 [Guillardia... [more]
AAZ08385.17.800e-11961.27delta-aminolevulinic acid dehydratase isoform 3 [T... [more]
3OBK_A7.800e-11961.27Chain A, Crystal Structure Of Delta-Aminolevulinic... [more]
XP_002369445.17.800e-11961.27parasite porphobilinogen synthase PBGS [Toxoplasma... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL096nonsL096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR134ngnoR134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02170.1NO07G02170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|538802gene_2543Nannochloropsis oceanica (N. oceanica CCMP1779)gene
hemBgene3379Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02170.1NO07G02170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02170 ID=NO07G02170|Name=NO07G02170|organism=Nannochloropsis oceanica|type=gene|length=1299bp
ATGTCTCTATTGAAAGCTTTTTTCTTCTGGGCCTTGCTGGGCTGTGCGGA
CGCTTTTGTTGGACCGTCAGTCGCCCCTTTCCGGCCCGCTGCGTCATGGT
CCTCCTGTGCTCAGCACGACAGCGGCCGTGGCTTGTATTTGAGCGCTGCA
GTTCAGCGCCCCACGGTCCCAAAAGCCGTATGTGCTACTTCTTCGGGCGG
TGCACCGGCGACCGGGCCGACCTCTTTGGGACCTTTGCCTCCACTGGAAG
GCTTTGACCCACGGGGAGGAAACATCCCTGCTGTCGGCACCAACAGCAAA
GGCGGCGTGTGGGTGCCGCAAATGGCGCGGCCCCGGCGAAACCGCAAGTC
TGAGGCTGTGCGTGGCATGGTACGGGAGAATATTGTGCTGCCCCGCAACT
TTATCTACCCGCTTTTCATCCACGAAGAGACCTATGACACAGAGATTTCC
TCCATGCCTGGCCAAAAGCGTTTCAGCCTAGCGGGCATGATGGCCGAGGT
GGCTGAGTCCTGGCAATACGGTGTCAAGACGTTCGTGCTTTTTCCCAAAG
TCGACGACAGCCTCAAGACAAATGACGGTCGGGAGGCTTATAACAAGGCG
GGCATTGTCCCGCGGGCGATTGGCATGATTAAGGAGAGCTTCCCCGAGGC
AACCGTTATGACAGACGTAGCGCTGGACCCATACTCGGACCAGGGCCACG
ACGGGATCGTACTGAATGGAAAGATCATCAATGATGAAACTATTGAGCAG
CTGTGCAAGCAGGCCATTTGCCAGGCCCGCGCTGGCGCTGACATAGTGGC
GCCCAGCGACATGATGGACGGACGCGTGGGGGCGCTGCGGCGGGCCCTGG
ACTCTGAGGGCTTTACAGATGTCTCCATCATGGCCTACACAGCTAAATAT
GCATCCGCCTACTATGGTCCATTCCGGGACGCCTTGGACTCACACCCAGG
CTTTGGGGACAAGAAGACATACCAACAAGACCCCGCCAACGGTCGCGAGG
CCCTTTTGGAGGCCGCACTTGATGCTGCCGAAGGTGCCGATTTCCTCATG
GTTAAGCCCGGCATGCCATACCTGGATGTCATCCTTCGCCTAAAACAGGC
ATCTAATCTACCCATCGCTGCTTATCACGTGTCGGGCGAATACGCCATGC
TCAAGGCCGCTGCTGAGAAGGGCTGGCTCAACGAAAAGGACGTTGTGCTC
GAGACGATGACTTGTTTTAAACGCGCTGGCTGTGACATCATCCTTACATA
TTACGCCAAGCAGGCGGCGAAATGGTTGGTCGAGGATGGGCTGATTTAA
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protein sequence of NO07G02170.1

>NO07G02170.1-protein ID=NO07G02170.1-protein|Name=NO07G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=433bp
MSLLKAFFFWALLGCADAFVGPSVAPFRPAASWSSCAQHDSGRGLYLSAA
VQRPTVPKAVCATSSGGAPATGPTSLGPLPPLEGFDPRGGNIPAVGTNSK
GGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEIS
SMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKA
GIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQ
LCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKY
ASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLM
VKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVL
ETMTCFKRAGCDIILTYYAKQAAKWLVEDGLI*
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Synonyms
Publications