NO07G02170, NO07G02170 (gene) Nannochloropsis oceanica

Overview
NameNO07G02170
Unique NameNO07G02170
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1299
Alignment locationchr7:646005..647303 -

Link to JBrowse

Properties
Property NameValue
DescriptionDelta-aminolevulinic acid dehydratase
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:646005..647303 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004655porphobilinogen synthase activity
GO:0046872metal ion binding
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0033014tetrapyrrole biosynthetic process
GO:0009987cellular process
GO:0009058biosynthetic process
Vocabulary: INTERPRO
TermDefinition
IPR001731ALAD
Homology
BLAST of NO07G02170 vs. NCBI_GenBank
Match: EWM27133.1 (delta-aminolevulinic acid dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 688.7 bits (1776), Expect = 1.100e-194
Identity = 348/432 (80.56%), Postives = 375/432 (86.81%), Query Frame = 0
Query:    1 MSLLKAFFFWALLGCADAFVGPSVAPFRPAASWSSCAQHDSGRGLYLSAAVQRPTVPKAVCATSSGGAPATGPTSLGPLPPLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGLI 433
            MS  K       LGC + FV P   P  PA   SS +    GR L+L  A++      +V  +S      TGPT+LGPLPPLEGFD + G+ PA+ TN++GGVWVPQMARPRRNRKSE +R MVRENIVLPRNFIYPLFIHEE Y+TEI SMPGQKRFSLAGMMAEVAES Q+GVKTFVLFPKV+D LKTNDGREAYN AGIVPRAI MIK+ FP+ TVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQA+CQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIM+YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQA+NLPIAAYHVSGEYAMLKAAAE+GWLNEKDVVLETMTCFKRAGCDIIL+YYAK A+KW++EDGLI
Sbjct:    1 MSFSKIAILLPFLGCVEGFVLP--FPPVPAGVSSSFSVRSDGRHLHLRPALKTAAGASSVDISSVKTDSITGPTTLGPLPPLEGFDGKAGSSPALTTNNQGGVWVPQMARPRRNRKSETLRAMVRENIVLPRNFIYPLFIHEERYETEIPSMPGQKRFSLAGMMAEVAESLQFGVKTFVLFPKVEDRLKTNDGREAYNPAGIVPRAIAMIKDRFPDVTVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAVCQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQATNLPIAAYHVSGEYAMLKAAAERGWLNEKDVVLETMTCFKRAGCDIILSYYAKMASKWMIEDGLI 430          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: XP_002177697.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC50511.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 555.8 bits (1431), Expect = 1.200e-154
Identity = 284/372 (76.34%), Postives = 310/372 (83.33%), Query Frame = 0
Query:   63 TSSGGAPATGP---TSLGPLPPLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            T+  GAP   P   T  G      GFDP  G+ PAV  N+   VWVPQ ARPRRNRKS A+RGMVRE IV P NFIYPLFIH+E  +  I+SMPG +R SL  M+ EV ES++ GVKTFVLFPKVDD+LKTN G EAYN  GIV RAI MIKE +PE+ V TDVALDPYSDQGHDG+V NGKI+ND TI QLCKQA+ QARAGADIVAPSDMMDGRV A+R ALDSEGFTDVSI++YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLDVI RLK  S+LPIAAYHVSGEYAM+KAA E+GWLNEKDVVLET+TCFKRAG DIILTYYAKQAAKW+ EDGL
Sbjct:   31 TALFGAPCFDPVDKTLKGVDADSTGFDPMAGSNPAVIRNNNDEVWVPQRARPRRNRKSAAMRGMVRECIVTPSNFIYPLFIHDEENNQAIASMPGCERHSLDSMLKEVGESFELGVKTFVLFPKVDDALKTNLGVEAYNPDGIVHRAIRMIKEKYPESIVCTDVALDPYSDQGHDGVVENGKILNDVTITQLCKQAVSQARAGADIVAPSDMMDGRVKAIRDALDSEGFTDVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALVEAALDAAEGADMLMVKPGMPYLDVIRRLKDNSDLPIAAYHVSGEYAMIKAACERGWLNEKDVVLETLTCFKRAGADIILTYYAKQAAKWIQEDGL 402          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: CAC36186.1 (ALA dehydratase [Trieres chinensis])

HSP 1 Score: 553.9 bits (1426), Expect = 4.400e-154
Identity = 288/414 (69.57%), Postives = 325/414 (78.50%), Query Frame = 0
Query:   18 AFVGPSVAPFRPAASWSSCAQHDSGRGLYLSAAVQRPTVPKAVCATSSGGAPATGPTSLGPLPPLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            A V  + AP  PA S SS           L +AV+       V A S   + +   +SL      + FDP  G+ PA+  N+   VWV Q ARPRRNRKS AVRGMVRENIV P NFIYPLFIHEE ++TEI SMPG +R SL  M+ EV E++  GVKTFVLFPKV D LKTN G EAYN  GIV RAI MIKE++P++ V TDVALDPYSDQGHDG+V +GKI+ND TI QLCKQA+ QARAGAD+VAPSDMMDGRVGA+R ALD+EGFTDVSI+AYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLD+I RLK A+ LP+AAYHVSGEYAM+KAA EKGWL EKDVVLET+TCFKRAG DIILTYYAKQAA+W+ +DGL
Sbjct:   12 AGVACAFAPSTPAFSRSSA----------LYSAVEDEVTTGPVAAGSIDRSLSGTDSSLS----YDAFDPTSGDSPALKRNNADEVWVSQRARPRRNRKSAAVRGMVRENIVTPANFIYPLFIHEEDFNTEIPSMPGCERHSLPNMLKEVGEAYDLGVKTFVLFPKVPDELKTNLGVEAYNPDGIVHRAIRMIKEAYPDSVVCTDVALDPYSDQGHDGVVEDGKILNDVTINQLCKQAVSQARAGADVVAPSDMMDGRVGAIRDALDAEGFTDVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDIIRRLKDATPLPVAAYHVSGEYAMIKAACEKGWLEEKDVVLETLTCFKRAGADIILTYYAKQAAQWIKDDGL 411          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: OEU16003.1 (porphobilinogen synthase [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 553.9 bits (1426), Expect = 4.400e-154
Identity = 268/347 (77.23%), Postives = 301/347 (86.74%), Query Frame = 0
Query:   85 FDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            FDP  G  PA+  N+KG VWV Q ARPRRNRKS  +RGMVRENIV P NFIYPLFIH+E ++ +I SMPG +R SL  M+ EV ES+  GVKTFVLFPK+ D LKTN G EAYN  GI+PRA+ MIKE++P++ V TDVALDPYSDQGHDGIV++GKIINDETI QLCKQ +CQARAGADIVAPSDMMDGRV A+R ALDSEGFT+VSI+AYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLDV+ RLK  S LPIAAYHVSGEYAM+KAA E+GWL+EK VV+ET+TCFKRAG DIILTYYAKQAA+W+ +DGL
Sbjct:   58 FDPVAGENPALTRNNKGEVWVQQRARPRRNRKSATMRGMVRENIVTPSNFIYPLFIHDEDFNQKIESMPGCERHSLDSMLKEVGESYDLGVKTFVLFPKIPDELKTNMGVEAYNPEGIIPRAVRMIKEAYPDSLVCTDVALDPYSDQGHDGIVVDGKIINDETINQLCKQVVCQARAGADIVAPSDMMDGRVKAIRDALDSEGFTNVSILAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDVVRRLKDNSPLPIAAYHVSGEYAMIKAACERGWLDEKAVVMETLTCFKRAGADIILTYYAKQAAQWIKDDGL 404          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: GAX12153.1 (porphobilinogen synthase [Fistulifera solaris])

HSP 1 Score: 550.4 bits (1417), Expect = 4.900e-153
Identity = 277/376 (73.67%), Postives = 309/376 (82.18%), Query Frame = 0
Query:   59 AVCATSSGGAPATGPT--SLGPLP-PLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            AV   ++  AP+  P   S+  LP     FDP  G   A+  N+K  VW+PQ ARPRRNRKS A+RGMVRENIV P NFIYPLFIH+E ++  I SMPG +R SL  M+ EV ES+  GVKTFVLFPKV D LKTN G EAYN  GIVPRAI MIK ++P+  V TDVALDPYSDQGHDG+V +GKI+ND TI QLCKQA+CQARAGAD+VAPSDMMDGRV A+R ALD+EGFTDVSI++YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLDVI RLK  S LPIAAYHVSGEYAM+KAA EKGWLNEKDVVLET+ CFKRAG DIILTYYAKQAA+W+ +DGL
Sbjct:   22 AVAPNAAKTAPSVDPVDKSMTSLPKETNAFDPTAGENAALQRNNKNEVWLPQRARPRRNRKSPAMRGMVRENIVTPSNFIYPLFIHDEDFNQPIPSMPGCERHSLDSMLREVGESYALGVKTFVLFPKVPDELKTNMGVEAYNPEGIVPRAIRMIKAAYPDTIVCTDVALDPYSDQGHDGVVEDGKILNDVTIHQLCKQAVCQARAGADVVAPSDMMDGRVKAIRDALDAEGFTDVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDVIRRLKDYSPLPIAAYHVSGEYAMIKAACEKGWLNEKDVVLETLMCFKRAGADIILTYYAKQAAQWMKDDGL 397          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: GAX21249.1 (porphobilinogen synthase [Fistulifera solaris])

HSP 1 Score: 548.9 bits (1413), Expect = 1.400e-152
Identity = 276/376 (73.40%), Postives = 309/376 (82.18%), Query Frame = 0
Query:   59 AVCATSSGGAPATGPT--SLGPLP-PLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            AV   ++  A +  P   S+  LP   + FDP  G   A+  N+K  VWVPQ ARPRRNRKS A+RGMVRENIV P NFIYPLFIH+E ++  I SMPG +R SL  M+ EV ES+  GVKTFVLFPKV D LKTN G EAYN  GIVPRA+ MIK ++P+  V TDVALDPYSDQGHDG+V +GKI+ND TI QLCKQA+CQARAGAD+VAPSDMMDGRV A+R ALD+EGFTDVSI++YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLDVI RLK  S LPIAAYHVSGEYAM+KAA EKGWLNEKDVVLET+ CFKRAG DIILTYYAKQAA+W+ +DGL
Sbjct:   22 AVAPNAAKTASSVDPVDKSMTSLPKETDAFDPTAGENAALQRNNKNEVWVPQRARPRRNRKSPAMRGMVRENIVTPSNFIYPLFIHDEDFNQPIPSMPGCERHSLDSMLREVGESYALGVKTFVLFPKVPDELKTNMGVEAYNPEGIVPRAVRMIKAAYPDTIVCTDVALDPYSDQGHDGVVEDGKILNDVTIHQLCKQAVCQARAGADVVAPSDMMDGRVKAIRDALDAEGFTDVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDVIRRLKDYSPLPIAAYHVSGEYAMIKAACEKGWLNEKDVVLETLMCFKRAGADIILTYYAKQAAQWMKDDGL 397          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: XP_002290177.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED91929.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 546.6 bits (1407), Expect = 7.000e-152
Identity = 270/349 (77.36%), Postives = 297/349 (85.10%), Query Frame = 0
Query:   83 EGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            E FDP  G  PAV  N++GGVWV Q ARPRRNRKS  VR MVRENIV P NFIYPLFIH+E +  +ISSMPG +R SL  M+ EV E+ + GVK FVLFPKVDD+LKTN   EAYN  GIV R+I MIKE +PEA V TDVALDPYSDQGHDG+V +G I+ND T+ QLCKQA+ QARAGADIVAPSDM DGRV A+R ALDSEGFT+VSI++YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDAAEGAD LMVKPGMPYLD+I RLK  S+LPIAAYHVSGEYAMLKAA EKGWL+EK VVLET+TCFKRAG DIILTYYAKQAAKW+ EDGL
Sbjct:   51 EAFDPTAGENPAVARNNQGGVWVQQRARPRRNRKSAGVRAMVRENIVTPSNFIYPLFIHDEDFCQDISSMPGCQRHSLPSMLNEVGEALELGVKAFVLFPKVDDALKTNLACEAYNPEGIVHRSIRMIKEKYPEAIVCTDVALDPYSDQGHDGVVEDGVILNDVTVNQLCKQAVSQARAGADIVAPSDMQDGRVKAIRDALDSEGFTNVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAAEGADMLMVKPGMPYLDIIRRLKDNSDLPIAAYHVSGEYAMLKAAVEKGWLDEKAVVLETLTCFKRAGADIILTYYAKQAAKWIKEDGL 399          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: CBN74212.1 (porphobilinogen synthase, putative chloroplast precursor [Ectocarpus siliculosus])

HSP 1 Score: 545.0 bits (1403), Expect = 2.000e-151
Identity = 269/379 (70.98%), Postives = 306/379 (80.74%), Query Frame = 0
Query:   57 PKAVCATSS-GGAP--ATGPTSLGPLPPLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGLI 433
            P A  A +  GG P     P  +        F+P  G    +  N+KG  WVPQ ARPRRNRKSEAVR MVREN+V P NFIYPLFIHEE ++ EI  MPG  R SL  M+ EV E+WQ+GV++FV+FPKV D LKTN   E YN +GIVPRA+ MIKE FP++ V TDVALDPYSDQGHDG+V +GKI+NDETI QL KQ +CQARAGAD+VAPSDMMDGRVGA+R ALDSEGFTDVSI+AYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGAD LMVKPGMPYLDVI RLK+++ LPI+AYHVSGEYAM+KAA E+GWL+E+  VLE MTCFKRAG D+ILTYYAK AA+WL EDGL+
Sbjct:   34 PSAFAAKNKVGGTPTMVATPDRVSTSASSSAFEPTKGPNAPLRVNNKGKAWVPQRARPRRNRKSEAVRSMVRENVVRPANFIYPLFIHEEDFEVEIKPMPGCLRHSLPHMLKEVEEAWQFGVRSFVVFPKVPDELKTNYADECYNPSGIVPRAVSMIKERFPDSIVCTDVALDPYSDQGHDGVVQDGKILNDETIMQLTKQVVCQARAGADVVAPSDMMDGRVGAIRDALDSEGFTDVSILAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADMLMVKPGMPYLDVIRRLKESTPLPISAYHVSGEYAMMKAAVERGWLDERAAVLEAMTCFKRAGADVILTYYAKDAARWLCEDGLV 412          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: EJK49854.1 (hypothetical protein THAOC_31221 [Thalassiosira oceanica])

HSP 1 Score: 542.0 bits (1395), Expect = 1.700e-150
Identity = 274/380 (72.11%), Postives = 307/380 (80.79%), Query Frame = 0
Query:   54 PTVPKAVCATSSGGAPATGPTSLGPLPPL--EGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDGL 432
            PTV ++     +G      PT  G    L  E FDP  G+ PAV  N+ GGVWV Q ARPRRNRKS  VR MVRENIV P NFIYPLFIH E ++T+I SMPG +R     M+ E+ E+ + GVKTFVLFPKV+D LKTN   EAYN  GIV R+I MIKE +PEA V TDVALDPYSDQGHDG+V NG I+ND T+ QLCKQA+ QA+AGADIVAPSDM DGRV A+R ALDSEGFT+VSI++YTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREAL+EAALDA EGAD LMVKPGMPYLD+I RLK AS+LPIAAYHVSGEY+MLKAA EKGWL+EKDVVLET+TCFKRAG DIILTYYAKQAA+W+ EDGL
Sbjct:   23 PTVSRS-ALFGAGNTDPVDPTMNGIDDNLGYEAFDPTAGDSPAVARNNNGGVWVKQRARPRRNRKSAGVRAMVRENIVTPANFIYPLFIHNEDHNTDIVSMPGCQRHCAESMLKEIGEALELGVKTFVLFPKVEDELKTNLACEAYNPEGIVHRSIRMIKEKYPEAIVCTDVALDPYSDQGHDGVVENGVILNDITVNQLCKQAVSQAKAGADIVAPSDMQDGRVKAIRDALDSEGFTNVSILSYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALIEAALDAEEGADMLMVKPGMPYLDIIRRLKDASDLPIAAYHVSGEYSMLKAAVEKGWLDEKDVVLETLTCFKRAGADIILTYYAKQAAQWIKEDGL 401          
BLAST of NO07G02170 vs. NCBI_GenBank
Match: CAC36148.1 (ALA dehydratase [Fucus vesiculosus])

HSP 1 Score: 540.0 bits (1390), Expect = 6.600e-150
Identity = 276/422 (65.40%), Postives = 322/422 (76.30%), Query Frame = 0
Query:   12 LLGCADAFVGPSVAPFRPAASWSSCAQHDSGRGLYLSAAVQRPTVPKAVCATSSGGAP---ATGPTSLGPLPPLEGFDPRGGNIPAVGTNSKGGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEISSMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKAGIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQLCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKYASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLMVKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVLETMTCFKRAGCDIILTYYAKQAAKWLVEDG 431
            L+   +AFV P     RP  +  + +   SG G+        PT   A   TS   AP   + G T          ++P  G    + +N+ G VW PQ  RPRRNRKSEA+R MVRENIV P NFIYPLFIH++ ++ EI SMPG  R SL  M+ EV E+W++GV+TFVLFP+V D LKTN G E YN  GIVPRA+ MIKE FP++ V TDVALDPYSDQGHDG+V +G+I+NDETI QL KQ +CQARAGAD+VAPSDMMDGR+GA+R ALD+EGFT+VSIMAYTAKYASA+YGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDA EGAD LMVKPGMPYLDVI RLK++SNLPIAAYHVSGEYAM+KAA E+GWL+E++ VLE MTCFKRAG D+ILTYYAK AA+WL EDG
Sbjct:   16 LVTVCEAFVAP-----RPPLAGLAPSSFTSGVGI-------TPTCAPAGVVTSMVAAPNSISAGTTE--TRTEAAAYNPLDGPNAPLRSNNNGEVWRPQKVRPRRNRKSEAMRSMVRENIVRPANFIYPLFIHDKDFEVEIQSMPGCLRHSLPHMLEEVEEAWKFGVRTFVLFPQVPDHLKTNYGEECYNPEGIVPRAVSMIKEKFPDSIVCTDVALDPYSDQGHDGVVKDGQILNDETIMQLTKQVVCQARAGADVVAPSDMMDGRIGAIRDALDAEGFTNVSIMAYTAKYASAFYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAEEGADMLMVKPGMPYLDVIRRLKESSNLPIAAYHVSGEYAMMKAAVERGWLDEREAVLEAMTCFKRAGADVILTYYAKDAARWLCEDG 423          
The following BLAST results are available for this feature:
BLAST of NO07G02170 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27133.11.100e-19480.56delta-aminolevulinic acid dehydratase [Nannochloro... [more]
XP_002177697.11.200e-15476.34predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CAC36186.14.400e-15469.57ALA dehydratase [Trieres chinensis][more]
OEU16003.14.400e-15477.23porphobilinogen synthase [Fragilariopsis cylindrus... [more]
GAX12153.14.900e-15373.67porphobilinogen synthase [Fistulifera solaris][more]
GAX21249.11.400e-15273.40porphobilinogen synthase [Fistulifera solaris][more]
XP_002290177.17.000e-15277.36predicted protein [Thalassiosira pseudonana CCMP13... [more]
CBN74212.12.000e-15170.98porphobilinogen synthase, putative chloroplast pre... [more]
EJK49854.11.700e-15072.11hypothetical protein THAOC_31221 [Thalassiosira oc... [more]
CAC36148.16.600e-15065.40ALA dehydratase [Fucus vesiculosus][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL096nonsL096Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR134ngnoR134Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G02170.1NO07G02170.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|538802gene_2543Nannochloropsis oceanica (N. oceanica CCMP1779)gene
hemBgene3379Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G02170.1NO07G02170.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G02170 ID=NO07G02170|Name=NO07G02170|organism=Nannochloropsis oceanica|type=gene|length=1299bp
ATGTCTCTATTGAAAGCTTTTTTCTTCTGGGCCTTGCTGGGCTGTGCGGA
CGCTTTTGTTGGACCGTCAGTCGCCCCTTTCCGGCCCGCTGCGTCATGGT
CCTCCTGTGCTCAGCACGACAGCGGCCGTGGCTTGTATTTGAGCGCTGCA
GTTCAGCGCCCCACGGTCCCAAAAGCCGTATGTGCTACTTCTTCGGGCGG
TGCACCGGCGACCGGGCCGACCTCTTTGGGACCTTTGCCTCCACTGGAAG
GCTTTGACCCACGGGGAGGAAACATCCCTGCTGTCGGCACCAACAGCAAA
GGCGGCGTGTGGGTGCCGCAAATGGCGCGGCCCCGGCGAAACCGCAAGTC
TGAGGCTGTGCGTGGCATGGTACGGGAGAATATTGTGCTGCCCCGCAACT
TTATCTACCCGCTTTTCATCCACGAAGAGACCTATGACACAGAGATTTCC
TCCATGCCTGGCCAAAAGCGTTTCAGCCTAGCGGGCATGATGGCCGAGGT
GGCTGAGTCCTGGCAATACGGTGTCAAGACGTTCGTGCTTTTTCCCAAAG
TCGACGACAGCCTCAAGACAAATGACGGTCGGGAGGCTTATAACAAGGCG
GGCATTGTCCCGCGGGCGATTGGCATGATTAAGGAGAGCTTCCCCGAGGC
AACCGTTATGACAGACGTAGCGCTGGACCCATACTCGGACCAGGGCCACG
ACGGGATCGTACTGAATGGAAAGATCATCAATGATGAAACTATTGAGCAG
CTGTGCAAGCAGGCCATTTGCCAGGCCCGCGCTGGCGCTGACATAGTGGC
GCCCAGCGACATGATGGACGGACGCGTGGGGGCGCTGCGGCGGGCCCTGG
ACTCTGAGGGCTTTACAGATGTCTCCATCATGGCCTACACAGCTAAATAT
GCATCCGCCTACTATGGTCCATTCCGGGACGCCTTGGACTCACACCCAGG
CTTTGGGGACAAGAAGACATACCAACAAGACCCCGCCAACGGTCGCGAGG
CCCTTTTGGAGGCCGCACTTGATGCTGCCGAAGGTGCCGATTTCCTCATG
GTTAAGCCCGGCATGCCATACCTGGATGTCATCCTTCGCCTAAAACAGGC
ATCTAATCTACCCATCGCTGCTTATCACGTGTCGGGCGAATACGCCATGC
TCAAGGCCGCTGCTGAGAAGGGCTGGCTCAACGAAAAGGACGTTGTGCTC
GAGACGATGACTTGTTTTAAACGCGCTGGCTGTGACATCATCCTTACATA
TTACGCCAAGCAGGCGGCGAAATGGTTGGTCGAGGATGGGCTGATTTAA
back to top

protein sequence of NO07G02170.1

>NO07G02170.1-protein ID=NO07G02170.1-protein|Name=NO07G02170.1|organism=Nannochloropsis oceanica|type=polypeptide|length=433bp
MSLLKAFFFWALLGCADAFVGPSVAPFRPAASWSSCAQHDSGRGLYLSAA
VQRPTVPKAVCATSSGGAPATGPTSLGPLPPLEGFDPRGGNIPAVGTNSK
GGVWVPQMARPRRNRKSEAVRGMVRENIVLPRNFIYPLFIHEETYDTEIS
SMPGQKRFSLAGMMAEVAESWQYGVKTFVLFPKVDDSLKTNDGREAYNKA
GIVPRAIGMIKESFPEATVMTDVALDPYSDQGHDGIVLNGKIINDETIEQ
LCKQAICQARAGADIVAPSDMMDGRVGALRRALDSEGFTDVSIMAYTAKY
ASAYYGPFRDALDSHPGFGDKKTYQQDPANGREALLEAALDAAEGADFLM
VKPGMPYLDVILRLKQASNLPIAAYHVSGEYAMLKAAAEKGWLNEKDVVL
ETMTCFKRAGCDIILTYYAKQAAKWLVEDGLI*
back to top
Synonyms
Publications