NO07G02020, NO07G02020 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02020 vs. NCBI_GenBank
Match: XP_005856401.1 (50s ribosomal protein l9, partial [Nannochloropsis gaditana CCMP526] >EKU19958.1 50s ribosomal protein l9, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 224.2 bits (570), Expect = 4.300e-55 Identity = 122/198 (61.62%), Postives = 148/198 (74.75%), Query Frame = 0 Query: 23 RAMSKKRAVNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKVEVGVPQLLLLQEHLQQQQDGGCPTAMGEKKGGVKEKREAVSVKVNILKDETKRDQR 221 R +SKKR VNVVLLEDLA +GFAGE VAVKPGYARNFLIPGRKAVYAT DNK H+V RS+EER LLEERRDF+ FK+R RA+TFTR +++DG LE PLTKA+LA A+RKQLKR V+E DI LP+G+E+ +LG+L +KV V VP L++ + Q DGG +KRE ++VKV I KDE KRD+R Sbjct: 95 RNLSKKRMVNVVLLEDLAFRGFAGEEVAVKPGYARNFLIPGRKAVYATHDNKLQHMVMRSNEERTLLEERRDFLYFKSRTMQRAITFTRNVAVDGQKLEHPLTKADLAAAMRKQLKRHVDEQDIWLPKGSEIKMLGELNVKVAVDVPLLMVEEMQESAQSDGG-------------KKREMLTVKVAIQKDEKKRDRR 279
BLAST of NO07G02020 vs. NCBI_GenBank
Match: EWM27172.1 (50s ribosomal protein l9 [Nannochloropsis gaditana]) HSP 1 Score: 224.2 bits (570), Expect = 4.300e-55 Identity = 122/198 (61.62%), Postives = 148/198 (74.75%), Query Frame = 0 Query: 23 RAMSKKRAVNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKVEVGVPQLLLLQEHLQQQQDGGCPTAMGEKKGGVKEKREAVSVKVNILKDETKRDQR 221 R +SKKR VNVVLLEDLA +GFAGE VAVKPGYARNFLIPGRKAVYAT DNK H+V RS+EER LLEERRDF+ FK+R RA+TFTR +++DG LE PLTKA+LA A+RKQLKR V+E DI LP+G+E+ +LG+L +KV V VP L++ + Q DGG +KRE ++VKV I KDE KRD+R Sbjct: 20 RNLSKKRMVNVVLLEDLAFRGFAGEEVAVKPGYARNFLIPGRKAVYATHDNKLQHMVMRSNEERTLLEERRDFLYFKSRTMQRAITFTRNVAVDGQKLEHPLTKADLAAAMRKQLKRHVDEQDIWLPKGSEIKMLGELNVKVAVDVPLLMVEEMQESAQSDGG-------------KKREMLTVKVAIQKDEKKRDRR 204
BLAST of NO07G02020 vs. NCBI_GenBank
Match: KMZ11983.1 (LSU ribosomal protein L9p [Candidatus Burkholderia humilis]) HSP 1 Score: 70.9 bits (172), Expect = 6.100e-9 Identity = 49/134 (36.57%), Postives = 76/134 (56.72%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKV 165 + ++LLE + G G+ V VK GYARNFLIPG+KA AT D A V R+D ER E+ + + +K+ +DG L +T A++A A++KQ VE++ +RLP+G + ++GD ++V Sbjct: 1 MQIILLEKVVNLGNLGDIVKVKDGYARNFLIPGKKARRATKDAIAEFEVRRADLERVAAEKLAATQAQGEKLNGFTVQIGQKVGVDG-RLFGSVTNADIADALKKQGFAEVEKSQVRLPQG-PIKLVGDHPVQV 132
BLAST of NO07G02020 vs. NCBI_GenBank
Match: XP_009823846.1 (ribosomal protein L9 [Aphanomyces astaci] >ETV87047.1 ribosomal protein L9 [Aphanomyces astaci]) HSP 1 Score: 70.5 bits (171), Expect = 8.000e-9 Identity = 50/138 (36.23%), Postives = 73/138 (52.90%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSD--EERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKVEV 167 V+VVL ED+ GF G+ VAVK GYARNFL P +KAVYAT N A + VE++ EE E+ R Q R + L F R + + + P+T + + QL +V + LP + ++G+ +K+ V Sbjct: 21 VDVVLKEDVPKLGFRGDVVAVKAGYARNFLYPEKKAVYATKLNLAAYKVEKTSTLEEGIDAEQERIREQIVKRLSTVTLKFKRHCTTPKPNTKSPVTAQNIVDKLESQLGIKVGIARVILP--DPIKLVGNHNVKIRV 156
BLAST of NO07G02020 vs. NCBI_GenBank
Match: WP_087668275.1 (50S ribosomal protein L9 [Caballeronia humi] >SAL44326.1 50S ribosomal protein L9 [Caballeronia humi]) HSP 1 Score: 70.5 bits (171), Expect = 8.000e-9 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKV 165 + ++LLE + G G+ V VK GYARNFLIPG+KA AT D A V R+D E+ E+ + + ++K +DG L +T A++A A++KQ VE+ +RLP G + ++GD I+V Sbjct: 1 MQIILLEKVVNLGNLGDIVKVKDGYARNFLIPGKKARRATKDAIAEFEVRRADLEKVAAEKLATATAAGEKLNGATVQISQKAGVDG-RLFGSVTNADIAEALKKQGLAEVEKAQVRLPEG-PLKLVGDHAIQV 132
BLAST of NO07G02020 vs. NCBI_GenBank
Match: PID72814.1 (50S ribosomal protein L9 [Desulfobulbus propionicus] >PIE60372.1 50S ribosomal protein L9 [Desulfobulbus propionicus]) HSP 1 Score: 70.5 bits (171), Expect = 8.000e-9 Identity = 46/138 (33.33%), Postives = 77/138 (55.80%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQ-LKRRVEETDIRLPRGTEVNVLGDLEIKVEVG 168 + ++L E + G GE V VKPGYARN+LIP +KAV T + A +R D E RL E+++D + A+ AD+ T+++ D L +T A++A A+ Q +K + ++ P + +G+ ++ V+VG Sbjct: 1 MEIILRETIDTLGLEGEVVKVKPGYARNYLIPQKKAVLVTPEALAELEQKRQDIEARLAEQKKDADKLAAQLADKTFIITKRVG-DDNRLFGSVTNADIAVAIEDQGIKFDKKNIVLKNP----IKEIGEYKVTVKVG 133
BLAST of NO07G02020 vs. NCBI_GenBank
Match: WP_027289246.1 (50S ribosomal protein L9 [Rhodovibrio salinarum]) HSP 1 Score: 70.1 bits (170), Expect = 1.000e-8 Identity = 51/142 (35.92%), Postives = 77/142 (54.23%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLG----DLEIKVEVGV 169 + V+LLE + GF G+ VAVKPGYARNFL+P +KA+ AT N+A +R++ E R E R+D R D ++ R+ G L +T ++A A+ Q R+E I+L G ++ +G D+ + EV V Sbjct: 1 MQVILLERVENLGFMGDEVAVKPGYARNFLLPQKKALRATDSNRAYFQSKRAELEARNAERRKDAETAAKRIDDMVVSMIRQAGETG-QLYGSVTARDIADALADQ-GARIERGQIQL--GRQIKTIGLHPVDVRLHPEVSV 138
BLAST of NO07G02020 vs. NCBI_GenBank
Match: WP_087657492.1 (50S ribosomal protein L9 [Caballeronia terrestris] >SAL65146.1 50S ribosomal protein L9 [Caballeronia terrestris]) HSP 1 Score: 70.1 bits (170), Expect = 1.000e-8 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKV 165 + ++LLE + G G+ V VK GYARNFLIPG+KA AT D A V R+D E+ E+ + + ++K +DG L +T A++A A++KQ VE+ +RLP G + ++GD I+V Sbjct: 1 MQIILLEKVVNLGNLGDIVKVKDGYARNFLIPGKKARRATKDAIAEFEVRRADLEKVASEKLAAATAAGEKLNGATVQISQKAGVDG-RLFGSVTNADIADALKKQGLAEVEKAQVRLPEG-PLKLVGDHAIQV 132
BLAST of NO07G02020 vs. NCBI_GenBank
Match: WP_061137521.1 (50S ribosomal protein L9 [Caballeronia fortuita] >SAK94898.1 50S ribosomal protein L9 [Caballeronia fortuita]) HSP 1 Score: 68.6 bits (166), Expect = 3.000e-8 Identity = 47/134 (35.07%), Postives = 76/134 (56.72%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKV 165 + ++LLE + G G+ V VK GYARNFLIPG+KA AT D A V R++ E+ E+ + + + ++K +DG L +T A++A A++KQ VE+ +RLP+G + ++GD ++V Sbjct: 1 MQIILLEKVVNLGNLGDIVKVKDGYARNFLIPGKKARRATKDAIAEFEVRRAELEKVAAEKLKAAEAQGEKLNGFTVQISQKAGVDG-RLFGSVTNADIADALKKQGFAEVEKAQVRLPQG-PIKMVGDHPVQV 132
BLAST of NO07G02020 vs. NCBI_GenBank
Match: WP_061168649.1 (50S ribosomal protein L9 [Caballeronia hypogeia] >SAK67880.1 50S ribosomal protein L9 [Caballeronia hypogeia]) HSP 1 Score: 68.6 bits (166), Expect = 3.000e-8 Identity = 48/134 (35.82%), Postives = 75/134 (55.97%), Query Frame = 0 Query: 31 VNVVLLEDLALQGFAGETVAVKPGYARNFLIPGRKAVYATADNKALHVVERSDEERRLLEERRDFVQFKARAADRALTFTRKISLDGTSLEQPLTKAELAGAVRKQLKRRVEETDIRLPRGTEVNVLGDLEIKV 165 + ++LLE + G G+ V VK GYARNFLIPG+KA AT D A V R+D E+ E+ + + + +K +DG L +T A++A A++KQ VE+ +RLP+G + ++GD ++V Sbjct: 1 MQIILLEKVVNLGNLGDIVKVKDGYARNFLIPGKKARRATKDAIAEFEVRRADLEKVAAEKLAAAQAQGEKLSGFTVQIGQKAGVDG-RLFGSVTNADIAEALKKQGFAEVEKAQVRLPQG-PIKMVGDHPVQV 132 The following BLAST results are available for this feature:
BLAST of NO07G02020 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02020 ID=NO07G02020|Name=NO07G02020|organism=Nannochloropsis oceanica|type=gene|length=1179bpback to top protein sequence of NO07G02020.1 >NO07G02020.1-protein ID=NO07G02020.1-protein|Name=NO07G02020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=236bpback to top Synonyms
Publications
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