NO07G02000, NO07G02000 (gene) Nannochloropsis oceanica
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Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G02000 vs. NCBI_GenBank
Match: XP_005856403.1 (casein kinase II subunit beta [Nannochloropsis gaditana CCMP526] >EKU19960.1 casein kinase II subunit beta [Nannochloropsis gaditana CCMP526] >EWM27206.1 casein kinase 2 subunit beta [Nannochloropsis gaditana]) HSP 1 Score: 236.9 bits (603), Expect = 8.900e-59 Identity = 123/220 (55.91%), Postives = 151/220 (68.64%), Query Frame = 0
Query: 40 KEEDD---DDSLEALFSAPELEDRRTQSSWIHRFCRTPGNELFCVVPASFLADEFNWLGLPSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEE-GRGRQEK---ADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDLCL 253
K EDD D SLEAL S+PE +D +SSWI +F R PG+E FC VP SFLA++FNWLGLP D+AA++LLL V G S + +P D+ QRMYGLIHARFIVTQKGL MR+K++ HFGRCPRLAC Q +LP+G +EE G Q K ++ H + CV ++CPRCRE+Y PAD HQQLNGAYWG +FAHLF+LAFP+L L
Sbjct: 123 KPEDDKLEDSSLEALLSSPESDD---ESSWISQFVRAPGHEFFCAVPCSFLAEDFNWLGLPLDMAAVDLLLERVAKGG-----STKRCRSLP--RDEAATQRMYGLIHARFIVTQKGLQVMRDKFQQAHFGRCPRLACCGQPVLPLGNSNEEIGETDQNKGKVVEKRHRSDGARECVKIFCPRCREVYWPADASHQQLNGAYWGPTFAHLFLLAFPELNL 332
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRX13474.1 (Casein kinase II subunit beta [Trichinella nelsoni]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 76/190 (40.00%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL N ++ D T S D + A+ +YGLIHAR+I+T +G++ M +K+ +G FGRCPR C Q LLP G+ D + V LYCP+C +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 20 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDNESEEDDGETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLDKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPKCMDLYNPKSSKHQSIDGAYFGTSFPHMVFMVHPEL 187
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRX13475.1 (Casein kinase II subunit beta [Trichinella nelsoni]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 76/190 (40.00%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL N ++ D T S D + A+ +YGLIHAR+I+T +G++ M +K+ +G FGRCPR C Q LLP G+ D + V LYCP+C +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 89 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDNESEEDDGETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLDKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPKCMDLYNPKSSKHQSIDGAYFGTSFPHMVFMVHPEL 256
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRX71150.1 (Casein kinase II subunit beta [Trichinella sp. T6]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 82/204 (40.20%), Postives = 109/204 (53.43%), Query Frame = 0
Query: 57 LEDR-RTQS-----SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
L DR RT S SW+ FCR GNE FC V F+ D FN GL P AA++LLL N ++ D T S D + A+ +YGLIHAR+I+T +G++ M +K+ +G FGRCPR C Q LLP G+ D + V LYCP+C +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 59 LRDRLRTMSSPHNLSWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDNESEEDDGETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLDKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPKCMDLYNPKSSKHQTIDGAYFGTSFPHMVFMVHPEL 240
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRX71151.1 (Casein kinase II subunit beta, partial [Trichinella sp. T6]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 82/204 (40.20%), Postives = 109/204 (53.43%), Query Frame = 0
Query: 57 LEDR-RTQS-----SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
L DR RT S SW+ FCR GNE FC V F+ D FN GL P AA++LLL N ++ D T S D + A+ +YGLIHAR+I+T +G++ M +K+ +G FGRCPR C Q LLP G+ D + V LYCP+C +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 20 LRDRLRTMSSPHNLSWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDNESEEDDGETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLDKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPKCMDLYNPKSSKHQTIDGAYFGTSFPHMVFMVHPEL 201
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRZ02483.1 (Casein kinase II subunit beta, partial [Trichinella zimbabwensis]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 77/190 (40.53%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL + ++ D T S D + A+ +YGLIHAR+I+T +G++ M EK+ +G FGRCPR C Q LLP G+ D + V LYCPRC +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 38 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDHESEEDDAETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLEKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPRCMDLYNPKSSKHQTVDGAYFGTSFPHMVFMVHPEL 205
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRZ02484.1 (Casein kinase II subunit beta, partial [Trichinella zimbabwensis]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 77/190 (40.53%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL + ++ D T S D + A+ +YGLIHAR+I+T +G++ M EK+ +G FGRCPR C Q LLP G+ D + V LYCPRC +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 30 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDHESEEDDAETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLEKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPRCMDLYNPKSSKHQTVDGAYFGTSFPHMVFMVHPEL 197
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRZ79516.1 (putative citrate synthase 2, mitochondrial [Trichinella papuae]) HSP 1 Score: 149.4 bits (376), Expect = 1.900e-32 Identity = 77/190 (40.53%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL + ++ D T S D + A+ +YGLIHAR+I+T +G++ M EK+ +G FGRCPR C Q LLP G+ D + V LYCPRC +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 2084 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDHESEEDDAETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLEKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPRCMDLYNPKSSKHQTVDGAYFGTSFPHMVFMVHPEL 2251
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRX59699.1 (Casein kinase II subunit beta [Trichinella sp. T9]) HSP 1 Score: 149.1 bits (375), Expect = 2.400e-32 Identity = 76/190 (40.00%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL N ++ D T S D + A+ +YGLIHAR+I+T +G++ M +K+ +G FGRCPR C Q LLP G+ D + V LYCP+C +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 56 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDNESEEDDGETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLDKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPKCMDLYNPKSSKHQTIDGAYFGTSFPHMVFMVHPEL 223
BLAST of NO07G02000 vs. NCBI_GenBank
Match: KRX71149.1 (Casein kinase II subunit beta [Trichinella sp. T6]) HSP 1 Score: 149.1 bits (375), Expect = 2.400e-32 Identity = 76/190 (40.00%), Postives = 103/190 (54.21%), Query Frame = 0
Query: 65 SWIHRFCRTPGNELFCVVPASFLADEFNWLGL----PSDLAAINLLLGNVVDKGDKLTVSVSKDSRVPFAWDDVIAQRMYGLIHARFIVTQKGLNAMREKYEHGHFGRCPRLACDEQVLLPVGVRDEEGRGRQEKADEGHSQRDYKGCVNLYCPRCRELYRPADPYHQQLNGAYWGTSFAHLFILAFPDL 251
SW+ FCR GNE FC V F+ D FN GL P AA++LLL N ++ D T S D + A+ +YGLIHAR+I+T +G++ M +K+ +G FGRCPR C Q LLP G+ D + V LYCP+C +LY P HQ ++GAY+GTSF H+ + P+L
Sbjct: 20 SWVAWFCRLRGNEFFCEVEEEFMRDRFNLTGLSEQVPHYRAALDLLLDNESEEDDGETSSKEMDMH------EQAAEMLYGLIHARYILTNQGISQMLDKWTNGDFGRCPRFFCTGQPLLPTGLSDV----------------PTESVVKLYCPKCMDLYNPKSSKHQTIDGAYFGTSFPHMVFMVHPEL 187 The following BLAST results are available for this feature:
BLAST of NO07G02000 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G02000 ID=NO07G02000|Name=NO07G02000|organism=Nannochloropsis oceanica|type=gene|length=1094bpback to top protein sequence of NO07G02000.1 >NO07G02000.1-protein ID=NO07G02000.1-protein|Name=NO07G02000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=323bpback to top Synonyms
Publications
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