NO07G01960, NO07G01960 (gene) Nannochloropsis oceanica

Overview
NameNO07G01960
Unique NameNO07G01960
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6998
Alignment locationchr7:571692..578689 +

Link to JBrowse

Properties
Property NameValue
DescriptionTetratricopeptide repeat protein 30a
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:571692..578689 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
IPR013026TPR-contain_dom
IPR019734TPR_repeat
Homology
BLAST of NO07G01960 vs. NCBI_GenBank
Match: XP_009041089.1 (hypothetical protein AURANDRAFT_72573 [Aureococcus anophagefferens] >EGB04238.1 hypothetical protein AURANDRAFT_72573 [Aureococcus anophagefferens])

HSP 1 Score: 754.6 bits (1947), Expect = 2.300e-214
Identity = 384/583 (65.87%), Postives = 455/583 (78.04%), Query Frame = 0
Query:    5 QALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPE-QRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            +ALY AGLYP+A RA +RV+  Q+ QR                        C  D+PE ++N AAI+FKEG ++ AR KYIEA+NTLGYQADLA N+ALC Y+ KQ+  ALK +AEII+RGV+EHPELSVGSN DGI+VRSVGNS VLQET L+EAFNLK+AI++ + N++ AKEALSDMPPR EEELD VTLHNQA++HM EDP TGF KLNFLL +PPFPPET GNL++LHC+  +YDLAAD+LA+     + FL  EL++YL+A+I+  TSPEEAYRKYDDLTNKHIDQLRKLTKAIQDAR   DNEAIKQ+L+ YDE LERYIPVLMAMARIYWD++NY MVE+LFRQSAEFCSEHEVWKLNVAHVFF+Q+SK+KE+IRYYDPIV+K   E +L+VPAIVLANLCVSYIMTSQNE AEELMRKIEKEEERL + E  R   HLCIVNLVIGTLYCAK NFEFGI+RI+KSLEPYD+KL  +TWYY+KRCFLALAENMAKH++ LKD S HE+  FL+A + HG  +  V  T T+                G      THN +SYEARQLK +F++L +
Sbjct:  512 RALYKAGLYPDATRAALRVDSPQFAQR------------------------CLPDDPETIINYAAIAFKEGQYDEARGKYIEAMNTLGYQADLACNVALCYYKQKQYAAALKSLAEIIERGVREHPELSVGSNTDGIDVRSVGNSSVLQETCLVEAFNLKSAIEYQMGNLDAAKEALSDMPPRQEEELDAVTLHNQALVHMDEDPSTGFRKLNFLLSNPPFPPETFGNLLLLHCKFGYYDLAADILAENTHLTYKFLSNELFEYLDASIMVQTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARISRDNEAIKQSLKFYDEALERYIPVLMAMARIYWDKENYPMVERLFRQSAEFCSEHEVWKLNVAHVFFMQESKFKEAIRYYDPIVKKK-SENILDVPAIVLANLCVSYIMTSQNEEAEELMRKIEKEEERLAYTEPDRQCYHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYDKKLGPDTWYYSKRCFLALAENMAKHMLMLKDASVHEIINFLEACDSHGANITTV-ITPTVDP-------------DGNHPAEVTHN-VSYEARQLKKIFLKLRD 1054          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: EWM27185.1 (tetratricopeptide repeat protein 30a [Nannochloropsis gaditana])

HSP 1 Score: 754.6 bits (1947), Expect = 2.300e-214
Identity = 372/491 (75.76%), Postives = 424/491 (86.35%), Query Frame = 0
Query:    1 MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWY 492
            M YAQALY+AGLY +A  A +RVEG QY+QRKL+LQSAIKYE++E P  KSL+ Q A DEP +++N  AI +KEG +E AREKYIEAL+ L Y+ADLAYNIALCSYQ KQFG ALKYI EII+RGVQEHPELSVGSNADG+EVRSVGNSPVLQ+TYLIEAFNLKAAI+F+L NME  KEAL+DMPPRLEEELDPVTLHN+A++HM  DP  GF KLN+LL HPP P ET GN+++L C+++FYDLA D+L +     H+ +  +L +YLEATILS   PE AY+K+D LTNKHIDQLRKLTKAIQDAR   DNEAIKQALRDYD+GLERYIPVLMAMARIYW+R NY MVEKLFRQSAEFCSEHEVWKLNVAHVFF+Q++KWKES+RYYDPIV KNGGEQLLN P IVLANLCVSYIMTSQNEAAEELMRKIEKEEER+   +Q+ + HLCIVNLVIG LYCAK NFEFGIARI+KSLEPYD+KLSA+TWY
Sbjct:   90 MFYAQALYHAGLYTDAWHASVRVEGPQYSQRKLLLQSAIKYELNEHPVCKSLMAQYAADEPTSLINFGAILYKEGKYENAREKYIEALSMLDYRADLAYNIALCSYQSKQFGVALKYITEIIERGVQEHPELSVGSNADGVEVRSVGNSPVLQDTYLIEAFNLKAAINFTLNNMEGTKEALNDMPPRLEEELDPVTLHNEALVHMPNDPIRGFQKLNYLLTHPPSPLETYGNVLLLLCKYRFYDLAGDLLDEAGRAPHTKVSSDLNEYLEATILSSCCPEAAYKKFDGLTNKHIDQLRKLTKAIQDARIARDNEAIKQALRDYDDGLERYIPVLMAMARIYWERLNYPMVEKLFRQSAEFCSEHEVWKLNVAHVFFMQENKWKESVRYYDPIVHKNGGEQLLNEPPIVLANLCVSYIMTSQNEAAEELMRKIEKEEERVILSDQQPIHHLCIVNLVIGKLYCAKGNFEFGIARIIKSLEPYDKKLSADTWY 580          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: CBJ30057.1 (flagellar associated protein [Ectocarpus siliculosus])

HSP 1 Score: 713.0 bits (1839), Expect = 7.700e-202
Identity = 367/628 (58.44%), Postives = 463/628 (73.73%), Query Frame = 0
Query:    4 AQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALK------------------YIA--------------------------EIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERL-EFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            AQ+LY AG+YPEA RA +RV+  QY QR + LQ AIKYE DEL A K L+DQC  D+P+ +++ A+ISFKE ++E AR+KY +A++TLGYQADLAYN ALC ++ KQ+  ALK                  YI+                          EII+RGV+EHPELSVGSN DGI+VRSVGNS VLQET L+EAFNL+AAI+ + K+ E+A EALSDMPPR E+ELDPVTLHNQA++HM +DP  GF KLNFLL +PPFPPET GNL++LHC++ +++LAAD+LA+ +   + FL  ELY+YL+A I+  TSPEEAYRKYD+LT+KHIDQLR+LTK IQDAR   DN+AIK +L  YD  LERYIPVLMAMARIYWDR+NY +VEKLFRQ+AEFCS+H+ WKLN AHVFF+++ K+KE+IRYY PIV+K   E +L VPAIVLANLCVS+IM SQN+ AEELMRKIEKEEE++ E   ++   HLCIVNLVIGTLYCAK NFEFGI+RI+KSLEPY++KL  +TW+YAKRCFLALAE M+KH++ LKD S +E+  FLDA + HG+ +                  G +    G+ +  K + T+SYE RQLK +F++L +
Sbjct:   88 AQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQGAIKYEQDELAACKGLVDQCLGDDPDTIISYASISFKEQDYEDARQKYADAMHTLGYQADLAYNTALCYFKDKQYVSALKRVGELSYTLVVLGELSIDYISGRKQRSFVSDKRKLMVSCLPRALWPDEIIERGVREHPELSVGSNTDGIDVRSVGNSQVLQETCLVEAFNLRAAIEQTRKDYEMAVEALSDMPPRREQELDPVTLHNQALLHMEDDPTAGFRKLNFLLSNPPFPPETFGNLLLLHCKYGYHELAADILAENSHLTYKFLSEELYEYLDAAIMVQTSPEEAYRKYDELTSKHIDQLRQLTKQIQDARIARDNDAIKTSLEMYDAALERYIPVLMAMARIYWDRENYPIVEKLFRQAAEFCSDHDTWKLNAAHVFFMEE-KFKEAIRYYQPIVKKQ-AESILEVPAIVLANLCVSHIMISQNDEAEELMRKIEKEEEKVAEQDPEKQCFHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYEKKLGTDTWFYAKRCFLALAEQMSKHMLILKDASLYEIIGFLDAADQHGHNIPTQ--------------IGPQVDPGGKHTPDKWNCTVSYETRQLKKIFLKLRD 699          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: ORY44703.1 (TPR-like protein [Rhizoclosmatium globosum])

HSP 1 Score: 699.1 bits (1803), Expect = 1.100e-197
Identity = 342/589 (58.06%), Postives = 451/589 (76.57%), Query Frame = 0
Query:    1 MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQ-YAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPE-QRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMK-AVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            + YAQALY +G Y  A +AC  +E  ++  + + LQSAIKYEMD+L   K L+DQ A D+ + ++N A + +KEG +E A  KY E L   GYQA+L YN+ALC YQLKQ+ PALK IA+II+RG+++HPELSVG   +GIEVRSVGNS +L ETYLIEAFNLKAAI++ LKN E A+EAL+DMPPRLE+ELDPVTLHNQA+ HM +DP TGF KLNFLL  PP PPE  GNL++L+C++ + D+A D++A+  A  + S L P L+++LEA++L  +SPEEAYRK+DDL  KH+D LRKLTK +Q+AR  +D E +K+ + DYD+ +ERYIPVLMA A+IYWD +NY+ VEK+FR+S EFC+EH+VWKLNVAHV F+Q+SK+KE++ +Y+PIV+K+  E +L++ AIVLANLCV+YIMTSQNE AEELMRKIEKEEER+ + +  +   HLCIVNLVIGTLYCAK N+EFGI+RI+KSLEP+++KL  +TWYYAKRCF +L E +AKH++ LKD+ F E+  F DA ELHG K+   +      G+++ AA  G    + G  +     N+++YEAR LK LF+RL E
Sbjct:   98 LYYAQALYKSGQYQPAQKACQTLENPEFAHKVIKLQSAIKYEMDDLQGCKLLIDQGAPDDTDTMINQACLLYKEGKYEDACMKYAETLRITGYQAELCYNLALCHYQLKQYVPALKNIADIIERGIRDHPELSVGMATEGIEVRSVGNSQILHETYLIEAFNLKAAIEYRLKNFESAREALTDMPPRLEQELDPVTLHNQALTHMDDDPSTGFEKLNFLLQQPPTPPEVFGNLLLLYCKYGYLDMAGDLMAESVAMGSVSTLTPYLFEFLEASLLRQSSPEEAYRKFDDLATKHVDILRKLTKQVQEARQNMDEETVKRVVNDYDDAVERYIPVLMAQAKIYWDMENYASVEKVFRKSVEFCNEHDVWKLNVAHVLFMQESKYKEAVSFYEPIVKKH-YENILDITAIVLANLCVAYIMTSQNEEAEELMRKIEKEEERVAYEDPAKRTYHLCIVNLVIGTLYCAKGNYEFGISRIIKSLEPFNKKLGTDTWYYAKRCFASLFETLAKHMIILKDSVFAEILAFFDACELHGRKIPIVIDPLGGPGAQNSAA--GNSTGYGGGETLDPARNSVAYEARLLKSLFLRLYE 683          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: XP_001692406.1 (flagellar associated protein [Chlamydomonas reinhardtii] >PNW81073.1 hypothetical protein CHLRE_07g342200v5 [Chlamydomonas reinhardtii])

HSP 1 Score: 696.0 bits (1795), Expect = 9.700e-197
Identity = 351/589 (59.59%), Postives = 441/589 (74.87%), Query Frame = 0
Query:    1 MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQ--HQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPE-QRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            + YAQ+LY  G+YPEA +A ++VEG Q     L++  A  YE D+L   +  LD+CA ++P+ +VN   I FKEG FE AR+K+ +A+  LGYQ +L YNIALC Y+ KQFGPALK++AEII++ V+EHPELSVGSN DG+EVRSVGNS  L+ET LIEAFNLKAAI++++KN+E AKEAL+DMPPR EEELDPVTLHN A+I+M  DP  GF KLNFLL  PPFPPET  NL++L+C+  H FYDLAAD+LA+    A   L P+LY YL+A I    SPEEA+R++D+L  +H++QLR+LTK IQDAR   DN+AIK+A+ +YDE LE YIP LMAMA IYWD + YS VEK+FRQSAEFCSEHEVWKLNVAH FF+QD+ +KE+IRYY+P+V+KN  + LL V AIVLANLCVSYIMTSQNE AEELMRK+EKEEER    +  +   HLCI+NLVIGTLYCAK N+EFG++RI+KSLEPYD+KL  +TWYYAKRCFLAL EN+AKH++ LKD+SF E+  FL+  E HG  ++ V               GK  +            TI+ EAR LK +F++L +
Sbjct:   85 LYYAQSLYKGGMYPEASKAVVKVEGHQKAVTTLLV--ACSYEQDDLTGCRRQLDKCAPEDPDTMVNTGCIMFKEGKFEAARQKFNDAVQALGYQPELLYNIALCYYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVEAAKEALTDMPPRAEEELDPVTLHNSALINMDSDPTGGFKKLNFLLQSPPFPPETFANLLLLYCKPSHGFYDLAADVLAENPQYAGKLLSPDLYDYLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSSMQDPDKPCFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWYYAKRCFLALIENLAKHMIVLKDSSFTEIMAFLNEAEKHGKDIRVVFNE------------GKHQS-----------RTIASEARMLKKMFLKLRD 647          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: 4UZY_A (Chain A, Crystal Structure Of The Chlamydomonas Ift70 And Ift52 Complex)

HSP 1 Score: 696.0 bits (1795), Expect = 9.700e-197
Identity = 351/589 (59.59%), Postives = 441/589 (74.87%), Query Frame = 0
Query:    1 MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQ--HQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPE-QRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            + YAQ+LY  G+YPEA +A ++VEG Q     L++  A  YE D+L   +  LD+CA ++P+ +VN   I FKEG FE AR+K+ +A+  LGYQ +L YNIALC Y+ KQFGPALK++AEII++ V+EHPELSVGSN DG+EVRSVGNS  L+ET LIEAFNLKAAI++++KN+E AKEAL+DMPPR EEELDPVTLHN A+I+M  DP  GF KLNFLL  PPFPPET  NL++L+C+  H FYDLAAD+LA+    A   L P+LY YL+A I    SPEEA+R++D+L  +H++QLR+LTK IQDAR   DN+AIK+A+ +YDE LE YIP LMAMA IYWD + YS VEK+FRQSAEFCSEHEVWKLNVAH FF+QD+ +KE+IRYY+P+V+KN  + LL V AIVLANLCVSYIMTSQNE AEELMRK+EKEEER    +  +   HLCI+NLVIGTLYCAK N+EFG++RI+KSLEPYD+KL  +TWYYAKRCFLAL EN+AKH++ LKD+SF E+  FL+  E HG  ++ V               GK  +            TI+ EAR LK +F++L +
Sbjct:   89 LYYAQSLYKGGMYPEASKAVVKVEGHQKAVTTLLV--ACSYEQDDLTGCRRQLDKCAPEDPDTMVNTGCIMFKEGKFEAARQKFNDAVQALGYQPELLYNIALCYYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVEAAKEALTDMPPRAEEELDPVTLHNSALINMDSDPTGGFKKLNFLLQSPPFPPETFANLLLLYCKPSHGFYDLAADVLAENPQYAGKLLSPDLYDYLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSSMQDPDKPCFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWYYAKRCFLALIENLAKHMIVLKDSSFTEIMAFLNEAEKHGKDIRVVFNE------------GKHQS-----------RTIASEARMLKKMFLKLRD 651          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: GBG33812.1 (Tetratricopeptide repeat protein 30A [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 695.3 bits (1793), Expect = 1.700e-196
Identity = 351/608 (57.73%), Postives = 461/608 (75.82%), Query Frame = 0
Query:    3 YAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLK---NMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGE-------------------QLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERL--EFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            +AQ+LY AGLYPEA RAC +V+  QYTQR +MLQ++IKYE ++L A +SL DQC  D+PE +V  A I++KEG FE AREK+ EA+NTLG+QA LA+NIALC YQ  +FGPALK++AEII+RGV+EHPEL VGSNADGI+VRSVGNS VL ET L+EAFNLKAAI++S+K   N++ A+EAL+DMPPR E ELDPVTLHNQA++++ +D   G  KLNFLL +PP PP+T GNL++L+C++  Y +AAD+LA++       L PELY +L+ATI++ TSPEEA+RKYDDL  KH++ LRKLTK IQD+R   +++A++ AL +YD+ LERYIPVLMA+ARIYW+R++Y+MVEK+FRQS+EFCSEH VWKLNVAHVFF+Q  K+K++I +Y+PIV+ +                       +L+V AIVLANLCV+YIMTSQNE AE+LMR+IEKEEER+  E P+++   HLCIVNLVIG LYC+K N EFGI+RI+KSLEPYD+KL  +TW+YAKRCFLALAE ++KH++ L D S+ E+ +FLDA + HG  +  V  +    + D A                  HN +S+EAR LK +F++LM+
Sbjct:  101 FAQSLYKAGLYPEATRACFQVDDPQYTQRMVMLQASIKYEQNDLRACESLADQCLADDPETIVCHACIAYKEGKFEEAREKFQEAMNTLGFQASLAHNIALCHYQKGEFGPALKHVAEIIERGVREHPELGVGSNADGIDVRSVGNSQVLHETALVEAFNLKAAIEYSMKPAGNLDAAREALNDMPPRSEGELDPVTLHNQALMNIDQDFAPGCRKLNFLLDNPPHPPQTFGNLLLLYCKNSLYGIAADVLAEHTHLTFKLLSPELYDFLDATIMTETSPEEAFRKYDDLAKKHVETLRKLTKNIQDSRTNRESDAVRTALAEYDQALERYIPVLMALARIYWEREHYAMVEKIFRQSSEFCSEHPVWKLNVAHVFFMQ-GKFKQAIHFYEPIVKASSSAAGSTASATSAVNPASYSTGSILDVTAIVLANLCVAYIMTSQNERAEDLMRRIEKEEERVAAEDPDKQCF-HLCIVNLVIGNLYCSKGNMEFGISRIIKSLEPYDKKLGTDTWFYAKRCFLALAETLSKHMMMLPDASYREIIDFLDAADKHGKNVPTVIESGPEANVDPA-----------------IHN-VSHEARLLKKMFLKLMD 688          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: CUG80996.1 (cyclosome protein, putative [Bodo saltans])

HSP 1 Score: 684.9 bits (1766), Expect = 2.200e-193
Identity = 337/592 (56.93%), Postives = 438/592 (73.99%), Query Frame = 0
Query:    3 YAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQYAGTAHSFLPPE---LYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPE-QRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGK----THNTISYEARQLKFLFIRLME 587
            YAQ+LY AGLY +A + C  ++  Q+  R + LQ+ I YE +ELP +K+ L++   D+PE +V    + +KEGN+EGA +K++ A N LG++ DL YN+ALC Y+++Q+GP+LK IAEII+RG++EHPEL++GSN +G E RSVGN+ VL+ET L+EAFNLKAAI++ +KN   AKEAL+DMPPRL+EELDPVTLHN A+++MAEDP  GF K N+LL HPPFPPET  NL++ +C++Q+YDLAAD+LA+ A  +  +L      LY +L+  I + T+P EAYRK+D L  KHIDQLRKLTK IQDA+   D E +K AL+ YDE LE YIPVLM  A IYWD +NY  VEKLFRQSAEFCSEHE WKLNVAHVFF+Q++K++E+IRYY+P+V  N  E +LN  AIVLANLCV+YIMTS N+ AEE+MRKIEKEEE+L F + ++   HLCIVNLVIGTLYCAK NFEFGI+RI+KSLEPY RK+  +TWYYAKRCFLAL+ ++AKH+V LKD++F E+  F D  + HG K+ A+                        P   K    T NT+ YEARQLK L+++L +
Sbjct:  103 YAQSLYKAGLYQDAFKVCSLIDSEQHANRIVKLQACISYEQEELPQTKACLEKSHADDPEVIVLQGCVLYKEGNYEGALQKFMSAANALGFKPDLTYNMALCHYRMQQYGPSLKAIAEIIERGIEEHPELNIGSNTEGNEARSVGNTQVLRETALVEAFNLKAAIEYMMKNYGAAKEALTDMPPRLQEELDPVTLHNTALVNMAEDPTNGFKKFNYLLQHPPFPPETFQNLLLFYCRYQYYDLAADVLAENAHLSWKYLSQRNQPLYDFLDGLITAQTAPAEAYRKFDILAQKHIDQLRKLTKRIQDAKQNHDKEGVKMALKAYDEALEEYIPVLMTQANIYWDIENYPAVEKLFRQSAEFCSEHETWKLNVAHVFFMQENKFREAIRYYEPVVEAN-SENILNCSAIVLANLCVAYIMTSLNDKAEEVMRKIEKEEEKLTFADPEKQPLHLCIVNLVIGTLYCAKGNFEFGISRIIKSLEPYHRKIMTDTWYYAKRCFLALSMSLAKHMVLLKDSTFTEMLAFFDQADHHGAKIPALI----------------------HPDPSKQDHSTKNTVRYEARQLKNLYLKLRD 671          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: KOO27723.1 (tpr domain containing protein [Chrysochromulina sp. CCMP291])

HSP 1 Score: 682.6 bits (1760), Expect = 1.100e-192
Identity = 344/593 (58.01%), Postives = 451/593 (76.05%), Query Frame = 0
Query:    1 MVYAQALYNAGLYPEAMRACMRV-EGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGN--------FEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRL 585
            + YAQAL+ AGLY  A++AC  V + S   QR + LQ+AIKYE D+L  +++L+DQC  D+ + +VN A + +KE          +E AR  + EA++  G+ A+LAY+I LC YQ KQ+GPALK IAEII+RGV+EHPELSVGS  +GI+VRSVGNS VL+ET LIEAFNLKAAI+F +KN + A+EALSDMPPR E+ELDPV+LHN A++HM ++P  GF KLNFL+ +PPFPPET  NL++L+C+HQ+YDLAAD+LA+ A     ++ PELY++L+AT++  T+P+EAYRK+DDL+ KHIDQLR LTK IQDAR + D + I++ L+ YDE LERYIPVLM+  RIYWD ++Y MVE++FRQSAEFCSEHEVW LNVAHVFF+Q++K+KE+IRYY+P V+K+    +L VPAIVLANLCV+YIMTSQNE AEELMRK+E+EEER E P++++  HLCI+NLVIGTLYCAK NFEFGI+RI+K+LEPY +KL  +TW+YAKR FLALA+ +AKH++ LKD +F+E+  FLDAV+LHG ++            D A C                   +S E+R +K +FIRL
Sbjct:   76 LYYAQALFKAGLYEPALKACQAVADSSALGQRVIQLQAAIKYEQDDLMNTRALIDQCPPDDADTLVNQACVMYKEAQQQGAEPSLYEKARLCFTEAMSKTGFVAELAYSIGLCHYQQKQYGPALKVIAEIIERGVREHPELSVGSQTEGIDVRSVGNSLVLKETALIEAFNLKAAIEFQMKNYDAAREALSDMPPRGEDELDPVSLHNSALMHMEKEPAQGFRKLNFLISNPPFPPETFVNLMLLYCKHQYYDLAADVLAENAHLTFQYMSPELYEFLDATLMVQTAPDEAYRKFDDLSRKHIDQLRSLTKNIQDARLQRDQDQIRRWLKLYDEALERYIPVLMSQGRIYWDLEHYPMVERIFRQSAEFCSEHEVWVLNVAHVFFLQENKFKEAIRYYEPTVKKHAA-NILQVPAIVLANLCVAYIMTSQNEDAEELMRKVEREEERGE-PDKQAF-HLCIINLVIGTLYCAKGNFEFGISRIMKALEPYPKKLGTDTWFYAKRAFLALADTLAKHMIMLKDATFNEILAFLDAVDLHGKQIPTKVQDHPDKPVDTARC------------------NVSSESRMMKKMFIRL 647          
BLAST of NO07G01960 vs. NCBI_GenBank
Match: XP_002951824.1 (hypothetical protein VOLCADRAFT_81612 [Volvox carteri f. nagariensis] >EFJ47275.1 hypothetical protein VOLCADRAFT_81612 [Volvox carteri f. nagariensis])

HSP 1 Score: 680.6 bits (1755), Expect = 4.200e-192
Identity = 344/590 (58.31%), Postives = 442/590 (74.92%), Query Frame = 0
Query:    1 MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQ--HQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEER--LEFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME 587
            + Y+Q+LY   +Y E+ +A ++VEG Q     L++  A  YE D+L   +  LD+C  D+P+ +VN   I FKEG +E AR+K+ +A+  LGYQ +L YNIALC Y+ KQFGPALK++AEII++ V+EHPELSVGSN DG+EVRSVGNS  L+ET LIEAFNLKAAI++++KN++ AKEAL+DMPPR EEELDPVTLHN A+I+M  DP  GF KLNFLL  PPFPPET  NL++L+C+  H FYDLAAD+LA+    A   L  +LY YL+A I    SPEEA+R++D+L  +H++QLR+LTK IQDAR   DN+AIK+A+ +YDE LE YIP LMAMA IYWD + YS VEK+FRQSAEFCSEHEVWKLNVAH FF+QD+ +KE+IRYY+P+V+KN  + LL V AIVLANLCVSYIMTSQNE AEELMRK+EKEEER  L+ P+ ++  HLCI+NLVIGTLYCAK N+EFG++RI+KSLEPYD+KL  +TWYYAKRCFL+L EN+AKH++ LKD+SF E+  FL+  E +G  ++ V +             GK  +            TI+ EAR LK +F++L +
Sbjct:   88 LYYSQSLYKVWMYTESSKAAVKVEGHQKAVTTLLV--ACAYEQDDLTGCRRQLDKCVPDDPDTMVNTGCIMFKEGKYEAARQKFNDAVQALGYQPELLYNIALCHYKTKQFGPALKHLAEIIEKAVREHPELSVGSNTDGMEVRSVGNSQTLKETALIEAFNLKAAIEYTMKNVDAAKEALTDMPPRAEEELDPVTLHNSALINMDTDPTGGFKKLNFLLQSPPFPPETFANLLLLYCKPTHGFYDLAADVLAENPQYASKLLSQDLYDYLQAAIGRYKSPEEAFRRFDELATRHVEQLRRLTKQIQDARIARDNDAIKRAINEYDEALEAYIPGLMAMASIYWDMELYSNVEKIFRQSAEFCSEHEVWKLNVAHTFFMQDNHYKEAIRYYEPVVKKN-ADNLLGVTAIVLANLCVSYIMTSQNEEAEELMRKVEKEEERSALQDPD-KACFHLCIINLVIGTLYCAKGNYEFGVSRIIKSLEPYDKKLETDTWYYAKRCFLSLIENLAKHMIQLKDSSFTEIMAFLNEAEKYGKDIRVVFSE------------GKHQS-----------RTIASEARMLKKMFLKLRD 650          
The following BLAST results are available for this feature:
BLAST of NO07G01960 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009041089.12.300e-21465.87hypothetical protein AURANDRAFT_72573 [Aureococcus... [more]
EWM27185.12.300e-21475.76tetratricopeptide repeat protein 30a [Nannochlorop... [more]
CBJ30057.17.700e-20258.44flagellar associated protein [Ectocarpus siliculos... [more]
ORY44703.11.100e-19758.06TPR-like protein [Rhizoclosmatium globosum][more]
XP_001692406.19.700e-19759.59flagellar associated protein [Chlamydomonas reinha... [more]
4UZY_A9.700e-19759.59Chain A, Crystal Structure Of The Chlamydomonas If... [more]
GBG33812.11.700e-19657.73Tetratricopeptide repeat protein 30A [Aurantiochyt... [more]
CUG80996.12.200e-19356.93cyclosome protein, putative [Bodo saltans][more]
KOO27723.11.100e-19258.01tpr domain containing protein [Chrysochromulina sp... [more]
XP_002951824.14.200e-19258.31hypothetical protein VOLCADRAFT_81612 [Volvox cart... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL095nonsL095Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000691NSK000691Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01960.1NO07G01960.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01960.2NO07G01960.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01960.3NO07G01960.3-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01960.4NO07G01960.4-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
Naga_100010g33gene3353Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01960.1NO07G01960.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01960.2NO07G01960.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01960.3NO07G01960.3Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01960.4NO07G01960.4Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01960 ID=NO07G01960|Name=NO07G01960|organism=Nannochloropsis oceanica|type=gene|length=6998bp
CCCAACCGCTGGGTGTGGTCTGACCCAAAAGTAGTCAGAAGAGAATTTAT
TCCGTGCACTAATTAAAGCTCTGGAAATTTGATGGATGGCATGTAGCACT
GGATATTTCGGCTGAGGAGGTGCTGTCTATCCGTGTTAACCCTCAGACTT
GTAGAAAGCAAAAGATCGAGTATCGAATTAATTATCTCAACAATTTACAT
CATCCTTAAGGGCATGCCTCTTTGTACATGTTTTAAAGTTCTTCCTTCCT
TGATGTACACGTTACTTTGGAGTTCTTTGTTCCCAGCTTTTGTGCCGATG
CTTCTGCATAACACTTTCTCCTCCCCCTTCCATGTCATAATCGACTTGTG
ATGGTCATTCCTGATGTTGCCCGATGTTTGACTCCAGTACTGCGCTCTTC
TTGATGGAGGTTTTCCTTCTCCCGCAAGTGGGTGAGGTACCATTTAGCCA
GCACACTTTGTCGCATGGTCTCGACGTCCCCGAACACTACATCCTTGAGT
ACTCGCAGCACGGCCACGTAGCTTTCTGGCCGACCTTCAAAGCCTTGCAA
TAAAAAATTCTTGCCCAAACTCTGCAATGCCACCTCCAACACCGAAAACG
GGCACACAAGGAGGGTTTGAAATAGAAGCTTGACCAATTTTCGCGTCTCT
GGTCGCCGAAGCTGTGCAGGGCCAGGGTCCATCCCACCCTCGCGCATGCC
TTTTTCACCCGGAATCTCGCGCCGAAGAAGAGCAAGAGCCCGGTCTTGAA
TCAGGTGTAGGCAATGCAGGAGGAGGGCTTGGCCGCCAGGGTCCCCCTCT
GTTGGGGTGGCACCAATAACTGCCCCTACACAGTAAGCCAGGTCTTGGAA
AGCGGTGCTGGTTGGGTAAGCTTCCAGAGACACTCGGACATAGGTAGCCA
TTACTCGCCGCCGGGCCTCGTCCCAGTGCCTTATCCGCCCTGCCCGGTAG
GCTAACAGATTAGGGTGAGAGATGAGGCTGCGCAAGCACCTGTGTACCTG
GGCTTGGGCCACTCCCCGTTTCGGGAAGTAAGGACATAGGACTTCTTGTA
GCAAAAAACGGGTTAGCTCGGCGACGTAGTGGTGAGGAGCGGGTCGTCGA
GTTTGGATGCACATAGCGAAGGCCAGGTTGATGAGGAATGCGAGACGGTT
CTCTTCTTGATGCTGCTGCTGCTCGTTTTGGATCTGTTCCCCCCTTTTGG
AGCCTAAAGCAGGGGTCTCACTGCTACTATCTGTGCTGTTACTTTTGTCG
CTGCAACTTCCTATTCCCAAGGATGCCATTTCCTTTGCCCGTTGTTTCGC
ACGTTCCTTCTGCCTACCTAAGGCCTTCATTATCCAATCCCTAGCCTCCT
TCAACCATCCCTCCTCTACATCATCCTCTAACACCGCTTGTAGATTCCCC
GACGCCTGCAACAGGGTATCTTGTAGAATGGATGGGGGCGAGGCAGGGCC
TACCAATGCGGCCACCGTGTCCAACACCTCCAGCACCCAAATAACCTGCC
CGGTGGAAGCAATCGCTGCTGAAGCCGGGTCGCTCAGCACCAAGCATATC
TGTAGGAGGAGGACGAGGCCCCACGGGTACGTACCGCTCTTACCGCCCGT
GATATCGGCAGTGATTACGGTGCGAGCATTAGAGCGAAGGATGGAGAACG
CTTCTATTTGCCCAATAGCATCCGATGCCTTGAACAGGGCAGTGATGGCT
TTGGCCATTTCATGTTGTCGATTTCCGACCGGACTTAAGCAACGTTCACA
TATATTCGCAGCTAGGATATCGACCTGTTTATTGTGCTGTGGTTGCTTGC
TGCTGCTGAAGCTGCTGCTACTGCCAATACTATTGCTTATATTGCTGCTA
TTGATGCCATTGAAGCTGGAACTGCCGATGCTGTTCATGTTGCCGTCCCT
GCTATGTACGTTGCTCACCATGTCTGCAGCTACCACAACGTCATCGAACG
ACAACGTTAAGAGAGTAGTGAGACAGACGCCCCATTCCCTCGTCCAGGCT
CTCGACTCGCCCTCGAACGAACGTGCACAAAAACGGGAATTCCCCAGCAT
GACCAAGGCACGACACAACCCCACTCGCGCCATTCGTAAGCCCTCCCATT
CCTCCCCCTCCCCTTCCTTGCTACAGTGTGCAGACGGTGAATGCACACTA
TGACGTATCACATCTTTGAGCAAACCCAGTAGCTTTTTCCATAACCTATC
ATCATCAAACCGGCCAGAGAGCAAGGCCACCGCTCCCACGCTCGCCGTGG
CCCGGTCCTGCCAACTGGTCGGGGCATCCATCGCTTCCAAAACCGCGTAA
GTAGCACTTTCCCTTCGCCATCCCACTGAGTCTGCCGGCCAGAGCACATT
GTCAACTACCTCTTCCTCGTCCTCCGGCAGCTGCATCAATATTTCGGCCC
ACGCGTCCCAAGCCCATATGTGCGAACTTCCAGCAACTACACCCATACAT
ACACGCACCAAACGGTATTCCACATCCGTAGCAGAAAGCAATTCGGCATT
TGCGTCAGTCAAGTCTAGTAGAAGTGCTTTTAATACATCACGCCACACCG
TGGGACCCCCATAATCTAATAAACATGCCGCTGCCCCTGGCCACGCCATA
AGTCGAGCAACCTGATCGACGACATCCCGAATTGGACAAGAGCGGAGTCG
ACCCACCAAAACCCATAGGTGTAATGCCTGCTGCATCAAACTTGCAGCCT
GTCCGGCTGTATTTTTTTCCTCTCCATCAAGGTTGCAGCTCCCAAAGGTC
TGACACGCCGCCTCGCTCGCAAGCTTGGCGGCGGCATGCACCACCTCGTT
TCGCAATTCAGAAGCGTCTACAAGCCTGGCAGAGGCCCAGCGCACACAGA
TTTCCAGACAGTCCGAAATTAGCTCATAAGAATTCGATGCTACCGGAGGC
GTGCCTGGACTGGCGGCCGCGTTGATGGCTTGACGGAGGACTGAGAGGAG
GACCTGCATTTCCTGAGGCTCCCATTCCCAACGAGGTCCTGTACGTGCCA
GCAACAGCTTTAGAATGGACTGTAAATGCATTAGCTCCTTAGCATATAAT
GATACCGGCCATAGGCGCCACACATTTTCCCGTAACCAATCGAAGAGGGC
GGTGGAGGGGGTCGAGGCGTCCAAGGAGGAGGGCAACGATAATGTATCGT
TTGAGACGAAGGATGGAGACACAGACAAGTGCCGGACAAGCTGCCACAGG
CTCTGGAAGCCCATCGCTTCTTTTTCTGTAAGGTACAGGGTGGGAGAAGA
GGCGATGGGATGAGTCGGGTGTCAGCAAGCAGGCAGACTTGTTGATTGCT
GTTGCTTGCCTGTCGTCCCGGTCATGGCATGATCGCGAGGCGGCGACGGC
GACTCGGACGACGACGACTGCGGAACAATTTGTAGCAAGCAACTGAATTT
TGCTCCGTCATTTCACGCAACAAATTGAGGCCAAGGCCCCCACATGGCGC
ACACACACAGCACACGCACTCCTACAGGGACCCAGGATACGTCCTGGTCG
TCGGTCATGCTCGGGGCGGGTCACCATCAGGCCCAGCGCCACCACCAAAC
GCCGGCAACTCTCGAGgtacgtcgcgctgtcggctgagaaacgataataa
ctctgcgtcttcttggttccgagcactcagtccccattcttaacagGGGC
AGTACACCAGCACCATCTATAGCTACATCAAGAGCCGAAGGTATGCAAGC
GCCGTCCAGATTTTGCATTCAGAATTGCAGGTATATCTGTGTTGTCTTGA
TGGAGGGTAGTCTTGCTGGGAACGCTTTTCATCAATCCGCAGAGCTTGTG
CCCGTGACTCTGACCTTGAATTTATGCACACTTACGACAGCGCTTCCCGC
AGAGTCGCGCGGCCCTCTCGTTGCTCGGCTTCTGCTTCTTTCACTCGCGA
AATTACCCCTCAGCTGTCACGGCGTATGAGGCCCTGCTCCAGCTCTATCC
TGGCGTGGAAGAGTACCAAATGGTGTATGCGCAAGCCCTCTACAACGCCG
GTCTCTATCCGGAGGCTATGCGCGCATGTATGCGTGTGGAAGGGTCCCAG
TATACCCAACGCAAACTCATGCTTCAGgtgcgtggtgggttccacggaat
gggacatcttagtttaggcgaggaatgggatagctagcgagctttttgaa
tgaaatacaaaaaatgaagtataatgatattacatggaagcacccgagga
cttgaaatcagaaaacatctatcgaagggctgcagatttgatagttcacg
tgagaccgggagatcagcgatatggtttgtactcctaacgaactgttctg
taccaccaatacagAGCGCCATAAAGTACGAGATGGATGAGCTACCTGCC
TCTAAGTCCCTGCTGGATCAGTGTGCGCTAGATGAGCCGGAAGCTGTCGT
GAATCTCGCCGCCATCTCTTTCAAAGAGgtaagtaaaacccagagtgcgt
acaactcagagagcatcgtgggattagggtgcttggcacatgcaaatatg
agcgcctatcgatttaagtttaaagaaatgattgatttgtatgtcttact
caggtgttgttccatcaaatatcacccacaatttgttttcataagGGCAA
TTTCGAGGGTGCCCGAGAGAAATATATTGAGGCCCTAAATACGCTGGGCT
ACCAAGCGGACCTGGCCTACAACATCGCATTGTGCTCATACCAGCTCAAA
CAATTTGGTCCCGCTCTCAAGTATATCGCGGAGATAATCGATCGCGGCGT
GCAGGAGCATCCGGAACTGAGTGTGGGAAGTAACGCGGATGGCATCGAGG
TCCGCAGTGTAGGAAATTCCCCTGTTCTTCAAGAGACGTACCTTATCGAG
GCTTTCAACCTAAAGgtaagatatcaggagaggctgtatgtttgtcatga
gtgatcacattgtcacgttttgttttggtttcctctcacgcacaatatga
tagGCGGCCATCGATTTCTCGCTGAAAAACATGGAACTTGCGAAAGAAGC
TCTGAGTGACATGCCGCCGCGTCTCGAGGAGGAACTGGATCCGGTCACGC
TACACAATCAAGCAATTATTCACATGGCTGAAGATCCAAGGACTGGTTTT
AACAAGCTCAATTTCCTTTTGATGCACCCGCCCTTCCCACCCGAGACCAT
TGGAAATCTCGTCGTCCTGCATTGCCAACATCAGTTTTACGACCTGGCCG
CCGACATGTTGGCGCAATATGCGGGTACTGCACACAGCTTTTTGCCTCCC
GAGCTGTATAAGTATTTAGAGGCAACGATTTTGAGTGGTACCTCTCCGGA
GGAAGCCTACCGCAAGTATGACGACCTCACCAACAAGCACATCGACCAAC
TGCGTAAGCTGACAAAGGCAATTCAGGACGCGCGCTTCAAGCTCGACAAT
GAGGCCATCAAGCAAGCATTACGGGATTATGATGAGGGACTGGAACGGTA
TATTCCCGTGCTGATGGCTATGGCGCGCATTTACTGGGATCGACAGAACT
ACTCAATGgtgagttcggagcaagcttagtggtgtcattttagtacctgg
gctttccgatgcagtacttttgtttgtgagccatcttatcaaactgacct
cagctcattcgaggtaagctttcataaataatctccacactttcgcacaa
aaaactagGTTGAGAAGCTTTTCCGCCAGTCGGCTGAGTTCTGTAGCGAG
CACGAGGTCTGGAAGCTCAACGTGGCGCACGTCTTCTTTATACAGgtatg
cgttatgtatatcacgcttccaatttatatgtcttgaatttgaattgaag
gcattgctgtcttggtgtctcgcgaacgtgcgtatctactcgcacgtgtg
gttgtgcgcgcatatgtgtaatttgtcctgtaagtgcttatctgcacgcg
cgctttgcggactttttaaatggtcgctcatttgctcaatcgatatcttt
acctgctatactaaaaacagGATTCTAAGTGGAAGGAGTCGATACGGTAT
TACGATCCTATTGTGCGCAAGAATGGCGGGGAACAGTTGCTGAACGTGCC
GGCCATTGTGCTTGCTAATTTGTGTGTTTCGTACATCATGACAAGCCAGA
ACGAGGCGGCAGAAGAGCTCATGCGCAAGATTGAGAAGGAGGAAGAGCGA
CTAGAGTTCCCAGAGCAGCGATCTGTTCAACACCTGTGCATCGTGAACCT
GGTCATTGGGACTCTGTACTGTGCCAAAAGTAATTTCGAATTTGGGATTG
CCCGCATCGTCAAGAGTCTGGAACCGTACGACAGAAAGCTAAGCGCCGAG
ACTTGGTAGGTGCTCAAAATAAGCAAAAGAGATAGCTGGGATCCAAGCAT
TTGGCTTTGGGACATATAAACGATACTCGACTGAAGCAAAGGCAGGAGAG
TCGGTTGCAGAAAAGTAAAATAGCGAGATTTGGGATGAACTCAACATATT
TTTTCCCATACGTGAAACACAGGTACTACGCCAAGCGCTGTTTCTTGGCA
TTGGCGGAAAACATGGCAAAACATCTTGTGACACTAAAGGATACATCCTT
TCACGAAGTTTTCGAGTTTCTAGATGCTGTAGAATTGCACGGGAACAAAA
TGAAGGCGGTCTCGGCCACTGCCACCTTGGGCAGCAAGGACGGCGCCGCA
TGTTGCGGGAAGCGTGCGACCTTCAGCGGTAGGCCCTCTACGGGCAAAAC
TCATAATACCATCAGTTACGAAGCCCGCCAACTGAAGTTTCTGTTCATCA
GATTGATGGAATAAACAATCATGATTAAATTACATGTATACAACCCTGAT
TTGGACTCGCATGCTTTGGATGCAAAAGTCACTTCTTGCAATGCAGTTTT
TGATCCTCCGAATATTGGGTGGAATAATTGGCGGGGTTGAAGGAAAGAGA
GCACGATGACAGAGAAGGTTCTGATCAAAACAAGAAATATCACACAAAAT
TTGACGCATAAGTAAAATAAACAAAATAAACGACACGAAAAGAGGGTG
back to top

protein sequence of NO07G01960.1

>NO07G01960.1-protein ID=NO07G01960.1-protein|Name=NO07G01960.1|organism=Nannochloropsis oceanica|type=polypeptide|length=699bp
MAHTHSTRTPTGTQDTSWSSVMLGAGHHQAQRHHQTPATLEGQYTSTIYS
YIKSRRYASAVQILHSELQRFPQSRAALSLLGFCFFHSRNYPSAVTAYEA
LLQLYPGVEEYQMVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSA
IKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEAL
NTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNA
DGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRL
EEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHC
QHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDD
LTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMA
RIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRY
YDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEER
LEFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAE
TWYYAKRCFLALAENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSA
TATLGSKDGAACCGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME*
back to top

protein sequence of NO07G01960.2

>NO07G01960.2-protein ID=NO07G01960.2-protein|Name=NO07G01960.2|organism=Nannochloropsis oceanica|type=polypeptide|length=603bp
MAHTHSTRTPTGTQDTSWSSVMLGAGHHQAQRHHQTPATLEGQYTSTIYS
YIKSRRYASAVQILHSELQRFPQSRAALSLLGFCFFHSRNYPSAVTAYEA
LLQLYPGVEEYQMVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSA
IKYEMDELPASKSLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEAL
NTLGYQADLAYNIALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNA
DGIEVRSVGNSPVLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRL
EEELDPVTLHNQAIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHC
QHQFYDLAADMLAQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDD
LTNKHIDQLRKLTKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMA
RIYWDRQNYSMVEKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRY
YDPIVRKNGGEQLLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEER
LEFPEQRSVQHLCIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAE
TW*
back to top

protein sequence of NO07G01960.3

>NO07G01960.3-protein ID=NO07G01960.3-protein|Name=NO07G01960.3|organism=Nannochloropsis oceanica|type=polypeptide|length=587bp
MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASK
SLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYN
IALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSP
VLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQ
AIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADML
AQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKL
TKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMV
EKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQ
LLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPEQRSVQHL
CIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETWYYAKRCFLAL
AENMAKHLVTLKDTSFHEVFEFLDAVELHGNKMKAVSATATLGSKDGAAC
CGKRATFSGRPSTGKTHNTISYEARQLKFLFIRLME*
back to top

protein sequence of NO07G01960.4

>NO07G01960.4-protein ID=NO07G01960.4-protein|Name=NO07G01960.4|organism=Nannochloropsis oceanica|type=polypeptide|length=491bp
MVYAQALYNAGLYPEAMRACMRVEGSQYTQRKLMLQSAIKYEMDELPASK
SLLDQCALDEPEAVVNLAAISFKEGNFEGAREKYIEALNTLGYQADLAYN
IALCSYQLKQFGPALKYIAEIIDRGVQEHPELSVGSNADGIEVRSVGNSP
VLQETYLIEAFNLKAAIDFSLKNMELAKEALSDMPPRLEEELDPVTLHNQ
AIIHMAEDPRTGFNKLNFLLMHPPFPPETIGNLVVLHCQHQFYDLAADML
AQYAGTAHSFLPPELYKYLEATILSGTSPEEAYRKYDDLTNKHIDQLRKL
TKAIQDARFKLDNEAIKQALRDYDEGLERYIPVLMAMARIYWDRQNYSMV
EKLFRQSAEFCSEHEVWKLNVAHVFFIQDSKWKESIRYYDPIVRKNGGEQ
LLNVPAIVLANLCVSYIMTSQNEAAEELMRKIEKEEERLEFPEQRSVQHL
CIVNLVIGTLYCAKSNFEFGIARIVKSLEPYDRKLSAETW*
back to top
Synonyms
Publications