NO07G01940, NO07G01940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01940 vs. NCBI_GenBank
Match: KDO63524.1 (hypothetical protein CISIN_1g027123mg [Citrus sinensis] >GAY61585.1 hypothetical protein CUMW_211100 [Citrus unshiu]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 0 Query: 7 MSTTPRMGRQLQRYEGDVRLISGCIP--LTQDG-----------NVVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQ 155 MS R GR QRY+ + RL+SGCIP LT+D V+++SS + PKGGWE DET EAA RE EE+GVRG + +PL +RSK + C+ +F +EVTE L WPE R RK ++ DA +C E R AL + ++++ Q Sbjct: 1 MSVEARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDTQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQ 169
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_002277367.3 (PREDICTED: nudix hydrolase 12, mitochondrial [Vitis vinifera] >CBI21254.3 unnamed protein product, partial [Vitis vinifera]) HSP 1 Score: 112.8 bits (281), Expect = 1.400e-21 Identity = 67/166 (40.36%), Postives = 89/166 (53.61%), Query Frame = 0 Query: 7 MSTT-PRMGRQLQRYEGDVRLISGCIPLTQDGN-------------VVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQIL 151 MST R GR QRYE ++RL+SGCIP Q N V++ISS + PKGGWE DET EAA RE EE+GV+G + +PL +RSK + C+ +F ++VTE L WPE RK S+++A +C E R AL LQ++ Sbjct: 1 MSTVQARTGRHRQRYENNLRLVSGCIPYRQTKNHEDHSTDLEKTIEVLMISSPNRNDLVFPKGGWEDDETVEEAACREALEEAGVKGILNEKPLGVWEFRSKSRQENCCLEGGCKGYMFALKVTEELETWPEKENHDRKWLSINEAFELCRYEWMRTALEAFLQVM 166
BLAST of NO07G01940 vs. NCBI_GenBank
Match: CBN77384.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 112.8 bits (281), Expect = 1.400e-21 Identity = 55/112 (49.11%), Postives = 75/112 (66.96%), Query Frame = 0 Query: 12 RMGRQLQRYEGDVRLISGCIPLTQDGNVVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGEACQLLLFMMEVTEILTEWPESSVRQR 123 R GR+ RY+GD RL++GC+P+T DG +VLI S + WILPKGGW+ DETA EAA RE YEE+GV+G V + L S RG + +F + V+++L EWPE R++ Sbjct: 5 RQGREKCRYDGDTRLVAGCLPVTPDGRLVLIGSVKHTDWILPKGGWDTDETAAEAAVREAYEEAGVKGLVTAD-LGPHEIVSSRGNKSRAAMFALLVSDVLDEWPEKHRRRK 115
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_024381615.1 (nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381618.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381620.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381621.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381622.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381623.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381624.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381625.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >XP_024381626.1 nudix hydrolase 16, mitochondrial-like isoform X2 [Physcomitrella patens] >PNR51085.1 hypothetical protein PHYPA_010271 [Physcomitrella patens]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 74/181 (40.88%), Postives = 102/181 (56.35%), Query Frame = 0 Query: 12 RMGRQLQRYEGDVRLISGCIPL----TQDG---NVVLISSRSGRWIL-PKGGWERDETAREAAARETYEESGVRGFV-GLEPLAEISYRSKRGEA-------CQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLDTNFGPRLRADAAM 177 R GR QRYE RL++GCIP T DG V++ISS+ G +L PKGGWE DET EAA RE EE+GV+G + G+ L ++SKR + C+ +F ++VTE L WPE RQR+ F++ DAI C + RGAL + + L +GS +N P L +D ++ Sbjct: 7 RTGRHQQRYEHGHRLVAGCIPYRYRPTGDGKSMEVLMISSQRGEGLLFPKGGWETDETVEEAACREALEEAGVKGHLQGM--LGTWDFKSKRQQGVFCPEGLCRAYMFALDVTEQLETWPEQHARQRQWFAVPDAIVQCRHDWMRGALDQCVAFL------ASGSSSTSN--PMLLSDTSL 177
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_024387834.1 (nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387835.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387836.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387837.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387838.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387839.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387840.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387842.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387843.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387844.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387845.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387846.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387847.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >XP_024387848.1 nudix hydrolase 16, mitochondrial-like [Physcomitrella patens] >PNR45353.1 hypothetical protein PHYPA_015124 [Physcomitrella patens]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 70/155 (45.16%), Postives = 92/155 (59.35%), Query Frame = 0 Query: 12 RMGRQLQRYEGDVRLISGCIPL----TQDG---NVVLISSRSGRWIL-PKGGWERDETAREAAARETYEESGVRGFV-GLEPLAEISYRSKRGEA-------CQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQIL 151 R GR QRYE RLI+GCIP T +G V++ISS+ G +L PKGGWE DET EAA RE EE+GVRG + G L +++SKR + C+ +F ++VTE L WPE R+R+ FS+SDAI C + RGAL + + L Sbjct: 7 RTGRHQQRYEHGHRLIAGCIPYRYIPTGEGKSMEVLMISSKRGEGLLFPKGGWETDETVEEAACREALEEAGVRGHLQGF--LGTWNFKSKRQQGVLCPEGNCRAYMFALDVTEQLDTWPEQHSRRRQWFSVSDAIGQCRHDWMRGALDQCVAYL 159
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_006446888.1 (nudix hydrolase 12, mitochondrial [Citrus clementina] >ESR60128.1 hypothetical protein CICLE_v10016552mg [Citrus clementina]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 66/165 (40.00%), Postives = 90/165 (54.55%), Query Frame = 0 Query: 7 MSTTPRMGRQLQRYEGDVRLISGCIP--LTQDG-----------NVVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQIL 151 MS R GR QRY+ + RL+SGCIP LT+D V+++SS + PKGGWE DET EAA RE EE+GVRG + +PL +RSK + C+ +F +EVTE L WPE R RK ++ DA +C E R AL + ++++ Sbjct: 1 MSVEARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDIQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVM 165
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_021973457.1 (nudix hydrolase 12, mitochondrial-like [Helianthus annuus] >OTG20882.1 putative nudix hydrolase [Helianthus annuus]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 64/158 (40.51%), Postives = 90/158 (56.96%), Query Frame = 0 Query: 8 STTPRMGRQLQRYEGDVRLISGCIPL----TQDGN---VVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQIL 151 S R GR LQRY+ ++RL+SGCIP T+D N V+++SS + PKGGWE DET EAA RE EE+GVRG + L +RSK + C+ +F ++VTE L WPE + R RK + +A +C E R AL+E ++++ Sbjct: 3 SIVARTGRHLQRYDNNLRLVSGCIPYRLDKTKDENRIEVLMVSSPNRDDMVFPKGGWESDETVEEAACREALEEAGVRGILDGNALGVWEFRSKSKQEACSEEGGCKGYMFALQVTEELETWPEKNNRNRKWVVIEEAFVLCRYEWMRNALKEFVKVI 160
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_024381614.1 (nudix hydrolase 16, mitochondrial-like isoform X1 [Physcomitrella patens]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 0 Query: 5 RPMSTTPRMGRQLQRYEGDVRLISGCIPL----TQDG---NVVLISSRSGRWIL-PKGGWERDETAREAAARETYEESGVRGFV-GLEPLAEISYRSKRGEA-------CQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLDTNFGPRLRADAAM 177 R + R GR QRYE RL++GCIP T DG V++ISS+ G +L PKGGWE DET EAA RE EE+GV+G + G+ L ++SKR + C+ +F ++VTE L WPE RQR+ F++ DAI C + RGAL + + L +GS +N P L +D ++ Sbjct: 70 RMTALVARTGRHQQRYEHGHRLVAGCIPYRYRPTGDGKSMEVLMISSQRGEGLLFPKGGWETDETVEEAACREALEEAGVKGHLQGM--LGTWDFKSKRQQGVFCPEGLCRAYMFALDVTEQLETWPEQHARQRQWFAVPDAIVQCRHDWMRGALDQCVAFL------ASGSSSTSN--PMLLSDTSL 247
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_024381617.1 (nudix hydrolase 16, mitochondrial-like isoform X4 [Physcomitrella patens]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 0 Query: 5 RPMSTTPRMGRQLQRYEGDVRLISGCIPL----TQDG---NVVLISSRSGRWIL-PKGGWERDETAREAAARETYEESGVRGFV-GLEPLAEISYRSKRGEA-------CQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLDTNFGPRLRADAAM 177 R + R GR QRYE RL++GCIP T DG V++ISS+ G +L PKGGWE DET EAA RE EE+GV+G + G+ L ++SKR + C+ +F ++VTE L WPE RQR+ F++ DAI C + RGAL + + L +GS +N P L +D ++ Sbjct: 48 RMTALVARTGRHQQRYEHGHRLVAGCIPYRYRPTGDGKSMEVLMISSQRGEGLLFPKGGWETDETVEEAACREALEEAGVKGHLQGM--LGTWDFKSKRQQGVFCPEGLCRAYMFALDVTEQLETWPEQHARQRQWFAVPDAIVQCRHDWMRGALDQCVAFL------ASGSSSTSN--PMLLSDTSL 225
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_024381616.1 (nudix hydrolase 16, mitochondrial-like isoform X3 [Physcomitrella patens]) HSP 1 Score: 112.5 bits (280), Expect = 1.900e-21 Identity = 75/188 (39.89%), Postives = 104/188 (55.32%), Query Frame = 0 Query: 5 RPMSTTPRMGRQLQRYEGDVRLISGCIPL----TQDG---NVVLISSRSGRWIL-PKGGWERDETAREAAARETYEESGVRGFV-GLEPLAEISYRSKRGEA-------CQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLDTNFGPRLRADAAM 177 R + R GR QRYE RL++GCIP T DG V++ISS+ G +L PKGGWE DET EAA RE EE+GV+G + G+ L ++SKR + C+ +F ++VTE L WPE RQR+ F++ DAI C + RGAL + + L +GS +N P L +D ++ Sbjct: 48 RMTALVARTGRHQQRYEHGHRLVAGCIPYRYRPTGDGKSMEVLMISSQRGEGLLFPKGGWETDETVEEAACREALEEAGVKGHLQGM--LGTWDFKSKRQQGVFCPEGLCRAYMFALDVTEQLETWPEQHARQRQWFAVPDAIVQCRHDWMRGALDQCVAFL------ASGSSSTSN--PMLLSDTSL 225 The following BLAST results are available for this feature:
BLAST of NO07G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01940 ID=NO07G01940|Name=NO07G01940|organism=Nannochloropsis oceanica|type=gene|length=1744bpback to top protein sequence of NO07G01940.1 >NO07G01940.1-protein ID=NO07G01940.1-protein|Name=NO07G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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