NO07G01940, NO07G01940 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01940 vs. NCBI_GenBank
Match: EWM27196.1 (nudix hydrolase 13 [Nannochloropsis gaditana]) HSP 1 Score: 241.1 bits (614), Expect = 3.500e-60 Identity = 122/179 (68.16%), Postives = 139/179 (77.65%), Query Frame = 0 Query: 1 MLTTRPMSTTPRMGRQLQRYEGDVRLISGCIPLTQDGNVVLISSRSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGEACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALREL-LQIL-----------------PHYQLHGAGSH 162 ML RP+STTPRMGRQLQRY G+VRLI+GCIPLT DGNVVLISSR+G WILPKGGWERDETAREAAARETYEE GV G V EP +E SYR+KRGE C LLLF+MEV+E+L +WPESSVR+R+L SLS+AI++CGKEEHR AL + LQ L H +LHGAGSH Sbjct: 1 MLVARPVSTTPRMGRQLQRYNGNVRLITGCIPLTSDGNVVLISSRTGDWILPKGGWERDETAREAAARETYEEGGVHGLVHAEPFSETSYRNKRGEECHLLLFVMEVSELLPQWPESSVRRRRLCSLSEAIDICGKEEHRAALLSIKLQGLNTLFTGEESQEEDSRREGHLELHGAGSH 179
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_011463304.1 (PREDICTED: nudix hydrolase 12, mitochondrial-like [Fragaria vesca subsp. vesca] >XP_011463305.1 PREDICTED: nudix hydrolase 12, mitochondrial-like [Fragaria vesca subsp. vesca]) HSP 1 Score: 120.2 bits (300), Expect = 8.900e-24 Identity = 74/186 (39.78%), Postives = 95/186 (51.08%), Query Frame = 0 Query: 10 TPRMGRQLQRYEGDVRLISGCIPLTQDGNV------------VLISSRSGR--WILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLDTNFGPRLRADA 175 T R GRQ QRYE +RL+SGCIP + V VL+ S R + PKGGWE DET EAA RE EE+GV+G +G PL + +RSK + C+ +F + VTE L WPE ++ RK S+ DA C + R ALR+LL L +T +GPR DA Sbjct: 5 TARTGRQRQRYEDQLRLVSGCIPYKFEETVGSSNCNVEKKLLVLMISSPNRDDLVFPKGGWENDETMHEAACREALEEAGVKGVLGETPLGQWEFRSKSKQNNGSLQGGCRGYMFALRVTEELDSWPEQAIYGRKWVSIEDAFRFCRYDWMREALRKLLTSLSE----------NTEYGPREELDA 180
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_022005691.1 (nudix hydrolase 13, mitochondrial-like isoform X1 [Helianthus annuus] >OTF98976.1 putative NUDIX hydrolase domain-like protein [Helianthus annuus]) HSP 1 Score: 118.2 bits (295), Expect = 3.400e-23 Identity = 67/158 (42.41%), Postives = 89/158 (56.33%), Query Frame = 0 Query: 8 STTPRMGRQLQRYEGDVRLISGCIPL------TQDGNVVLISSRSGR--WILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQIL 151 S R GR LQRY+ ++RL+SGCIP QD VL+ S R + PKGGWE DET EAA RE EE+GVRG + L E +RSK + C+ +F++EVTE L WPE + R RK ++ +A VC E R AL E ++++ Sbjct: 3 SIVARTGRHLQRYDNNLRLVSGCIPFRLTKPKDQDKIEVLMVSSPNRDDMVFPKGGWESDETVEEAACREALEEAGVRGVIKGNSLGEWEFRSKSKQEACSEEGGCKGYMFVLEVTEELETWPEQNNRNRKWVTIEEAFVVCRYEWMRNALEEFVKVM 160
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_017244421.1 (PREDICTED: nudix hydrolase 13, mitochondrial isoform X2 [Daucus carota subsp. sativus]) HSP 1 Score: 117.1 bits (292), Expect = 7.500e-23 Identity = 66/172 (38.37%), Postives = 92/172 (53.49%), Query Frame = 0 Query: 12 RMGRQLQRYEGDVRLISGCIP-------------LTQDGNVVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHL 163 R GRQ QRYE ++RL+SGCIP L V++ISS + PKGGWE DET EAA RE EE+GV+G + + L + ++RSK + C++ +F +EVTE L WPE RK + DA +C + AL + L+++ + HGAG L Sbjct: 7 RKGRQRQRYEDNLRLVSGCIPYRVVRNNAEDSFDLESSLEVLMISSPNRDDLVFPKGGWENDETVEEAACREALEEAGVKGIIKGDSLGDWTFRSKSRQESGCLEGGCKVCMFALEVTEELDAWPEQENHDRKWLFIKDAFQLCRYKWMSTALEKFLEVMATEEKHGAGQSL 178
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_021828246.1 (nudix hydrolase 12, mitochondrial-like isoform X2 [Prunus avium]) HSP 1 Score: 117.1 bits (292), Expect = 7.500e-23 Identity = 68/163 (41.72%), Postives = 91/163 (55.83%), Query Frame = 0 Query: 10 TPRMGRQLQRYEGDVRLISGCIP-------------LTQDGNVVLISSRS-GRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILP 152 T R GRQ QRYEG +RL+SGCIP +D V++ISS S + PKGGWE DET EAA RE +EE+GV+G +G PL + +RSK + C+ +F MEVTE L WPE + RK ++ +A C + R AL++ + LP Sbjct: 5 TARTGRQRQRYEGHLRLVSGCIPYKFEKSVGGSNCSTEKDLLVLMISSPSRDDLVFPKGGWEDDETMSEAACREAWEEAGVKGVLGETPLGDWEFRSKSKQNSCSLQGGCRGFMFAMEVTEELDSWPEQANYGRKWLTIEEAYRACRYDWMREALKKFVTALP 167
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_009353496.1 (PREDICTED: nudix hydrolase 12, mitochondrial-like isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 115.9 bits (289), Expect = 1.700e-22 Identity = 71/171 (41.52%), Postives = 92/171 (53.80%), Query Frame = 0 Query: 10 TPRMGRQLQRYEGDVRLISGCIPL---TQDGN------VVLISSRS-GRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLD 164 T R GRQ QRY+G +RL+SGCIP DG+ V++ISS S + PKGGWE DET EAA RE EE+GV+G +G PL YRSK + C+ +F MEVTE L WPE + RK ++ +A C + R ALR+ L + + LD Sbjct: 5 TARTGRQRQRYDGHLRLVSGCIPYRFEKSDGSIEQKLLVLMISSPSRDDLVFPKGGWEDDETMSEAACREALEEAGVKGVLGDNPLGAWEYRSKSKQKSCSLQGGCKGFMFAMEVTEELDSWPEQANYGRKWLTIEEAFRSCRYDWMREALRKFATALSETRENDTRKELD 175
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_024194200.1 (nudix hydrolase 12, mitochondrial-like isoform X2 [Rosa chinensis] >PRQ39743.1 putative diadenosine hexaphosphate hydrolase (AMP-forming) [Rosa chinensis]) HSP 1 Score: 115.5 bits (288), Expect = 2.200e-22 Identity = 70/175 (40.00%), Postives = 91/175 (52.00%), Query Frame = 0 Query: 10 TPRMGRQLQRYEGDVRLISGCIPLTQDGNV------------VLISSRSGR--WILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQLHGAGSHLD 164 T R GRQ QRYE +RL+SGCIP + V VL+ S R + PKGGWE DET EAA RE EE+GV+G +G PL + +RSK + C+ +F + VTE L WPE ++ RK ++ DA C + R ALR+LL L +G LD Sbjct: 5 TARTGRQRQRYEDQLRLVSGCIPYRFEETVGSSNCNVEKKLLVLMISSPDRDDLVFPKGGWENDETMHEAACREALEEAGVKGVLGETPLGQWEFRSKSKQNNGSLQGGCRGYMFALRVTEELDSWPEQAIYGRKWVTVEDAFKFCRYDWMREALRKLLIALSDNTENGPREELD 179
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_023881653.1 (nudix hydrolase 13, mitochondrial-like isoform X2 [Quercus suber] >POF27239.1 nudix hydrolase 13, mitochondrial [Quercus suber]) HSP 1 Score: 114.0 bits (284), Expect = 6.400e-22 Identity = 68/168 (40.48%), Postives = 89/168 (52.98%), Query Frame = 0 Query: 8 STTPRMGRQLQRYEGDVRLISGCIPL------------TQDGNVVLISSRSGR--WILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQ 155 S R GR QRYEG+ RL+SGCIP +DG VL+ S R + PKGGWE DET EAA RE +EE+GV+G + +PL E +RSK + C+ +F +EVTE WPE R RK + +A +C E R AL E L+++ Q Sbjct: 7 SEPARTGRLRQRYEGNYRLVSGCIPYRVSKEENEHSGEKEDGIEVLMVSSPNRDDLVFPKGGWEDDETKEEAACREAFEEAGVKGKLKEKPLGEWVFRSKSKQDICSLEGGCKGYMFALEVTEEHDTWPERGNRDRKWLKIKEAFRLCRYEWMREALEEFLRVMAEDQ 174
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_023881589.1 (nudix hydrolase 13, mitochondrial-like isoform X1 [Quercus suber]) HSP 1 Score: 114.0 bits (284), Expect = 6.400e-22 Identity = 68/168 (40.48%), Postives = 89/168 (52.98%), Query Frame = 0 Query: 8 STTPRMGRQLQRYEGDVRLISGCIPL------------TQDGNVVLISSRSGR--WILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQ 155 S R GR QRYEG+ RL+SGCIP +DG VL+ S R + PKGGWE DET EAA RE +EE+GV+G + +PL E +RSK + C+ +F +EVTE WPE R RK + +A +C E R AL E L+++ Q Sbjct: 7 SEPARTGRLRQRYEGNYRLVSGCIPYRVSKEENEHSGEKEDGIEVLMVSSPNRDDLVFPKGGWEDDETKEEAACREAFEEAGVKGKLKEKPLGEWVFRSKSKQDICSLEGGCKGYMFALEVTEEHDTWPERGNRDRKWLKIKEAFRLCRYEWMREALEEFLRVMAEDQ 174
BLAST of NO07G01940 vs. NCBI_GenBank
Match: XP_006468932.1 (PREDICTED: nudix hydrolase 12, mitochondrial [Citrus sinensis]) HSP 1 Score: 113.2 bits (282), Expect = 1.100e-21 Identity = 67/169 (39.64%), Postives = 91/169 (53.85%), Query Frame = 0 Query: 7 MSTTPRMGRQLQRYEGDVRLISGCIP--LTQDG-----------NVVLISS-RSGRWILPKGGWERDETAREAAARETYEESGVRGFVGLEPLAEISYRSKRGE-------ACQLLLFMMEVTEILTEWPESSVRQRKLFSLSDAINVCGKEEHRGALRELLQILPHYQ 155 MS R GR QRY+ + RL+SGCIP LT+D V+++SS + PKGGWE DET EAA RE EE+GVRG + +PL +RSK + C+ +F +EVTE L WPE R RK ++ DA +C E R AL + ++++ Q Sbjct: 1 MSVEARTGRLRQRYDNNFRLVSGCIPYRLTKDAEDENEDIQTRIEVLMVSSPNRSDLVFPKGGWENDETVMEAACREALEEAGVRGKLNEKPLGIWEFRSKSKQDLHSLEGGCRGYMFSLEVTEELEIWPEQENRYRKWLNIQDAFQLCRYEWMREALEKFMKVMSEEQ 169 The following BLAST results are available for this feature:
BLAST of NO07G01940 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01940 ID=NO07G01940|Name=NO07G01940|organism=Nannochloropsis oceanica|type=gene|length=1744bpback to top protein sequence of NO07G01940.1 >NO07G01940.1-protein ID=NO07G01940.1-protein|Name=NO07G01940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=238bpback to top Synonyms
Publications
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