NO07G01900, NO07G01900 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01900 vs. NCBI_GenBank
Match: XP_005856407.1 (hypothetical protein NGA_2119400, partial [Nannochloropsis gaditana CCMP526] >EKU19964.1 hypothetical protein NGA_2119400, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 435.3 bits (1118), Expect = 2.700e-118 Identity = 226/381 (59.32%), Postives = 278/381 (72.97%), Query Frame = 0 Query: 70 GPLERMIKRALHGFALFLSFTFLGVLLLVLKGLGFDKMSGLAKLPPAATSYLAVFVPFWVADFVGWVMVGQTLIGTCSLRTRDVRDDRRHMVRLTAKEAQNTISLEMFPLVQVLVRALLTVTPFLICVTTAHILLALSLE-------RAQVPLWLALMPLVIWDFLALLSTWCLRTGSFSKALGWFLVLLSTLTLGLRFSTPPPQLLDVAWPVAGDEAPLWLAFTPFWALQILLLFMLLYVALQACCIRRYRLTSQHVACLVLYAGSLALLTLSSVLVAWRHDAWEVTLDHALRFRNFSETLAGIALFCGVGFGELGLYLLAAEEAELLITSNGYEDPMPLSRTARGWEPTGAGASNWLLLGRVEETATLMRRGGWRGRWG 444 GPLER +K AL GFA++L+ TFLGV+ LVLK L FDK+ A+ Y +F PFW AD V W++V L TCSLRT V+ + R M + +EAQ T+S EM PL Q+++RALL TPFL+C+T AHILL + L+ R V LWLA++P+V+W+ LAL+S CLRTGSFSKALGW L+L +TL +GLRFS+PP L + A APLW+ FTPFWAL+ILLL L+YV++QACC RRYRL+SQHV+C++LY SL L L+SV+ AWRH WE L+HALR +NFS+TL+GIA C VGF ELG YL+AA+E E L TS+GYEDPMPLSRTARGWEPTGA SNWLLLGR+EETA LMRRGG G G Sbjct: 34 GPLERTMKWALTGFAIYLALTFLGVVFLVLKSLEFDKLPPFARTGLILKGYWLIFTPFWAADLVAWMVVLWALHWTCSLRTSGVQHESRIMAPSSHREAQKTLSTEMLPLFQIVMRALLNATPFLLCITAAHILLFIFLQSGGGNFGRPWVSLWLAILPIVLWEMLALISAICLRTGSFSKALGWLLILFATLMVGLRFSSPPFPLSSIPCIRAAHNAPLWVTFTPFWALEILLLATLVYVSIQACCARRYRLSSQHVSCIILYTSSLGFLALASVMFAWRHGTWESGLNHALRLQNFSDTLSGIATLCAVGFAELGFYLVAADEVEHLTTSHGYEDPMPLSRTARGWEPTGARVSNWLLLGRLEETARLMRRGGLAGTSG 414
BLAST of NO07G01900 vs. NCBI_GenBank
Match: EWM27151.1 (hypothetical protein Naga_100010g42 [Nannochloropsis gaditana]) HSP 1 Score: 435.3 bits (1118), Expect = 2.700e-118 Identity = 226/381 (59.32%), Postives = 278/381 (72.97%), Query Frame = 0 Query: 70 GPLERMIKRALHGFALFLSFTFLGVLLLVLKGLGFDKMSGLAKLPPAATSYLAVFVPFWVADFVGWVMVGQTLIGTCSLRTRDVRDDRRHMVRLTAKEAQNTISLEMFPLVQVLVRALLTVTPFLICVTTAHILLALSLE-------RAQVPLWLALMPLVIWDFLALLSTWCLRTGSFSKALGWFLVLLSTLTLGLRFSTPPPQLLDVAWPVAGDEAPLWLAFTPFWALQILLLFMLLYVALQACCIRRYRLTSQHVACLVLYAGSLALLTLSSVLVAWRHDAWEVTLDHALRFRNFSETLAGIALFCGVGFGELGLYLLAAEEAELLITSNGYEDPMPLSRTARGWEPTGAGASNWLLLGRVEETATLMRRGGWRGRWG 444 GPLER +K AL GFA++L+ TFLGV+ LVLK L FDK+ A+ Y +F PFW AD V W++V L TCSLRT V+ + R M + +EAQ T+S EM PL Q+++RALL TPFL+C+T AHILL + L+ R V LWLA++P+V+W+ LAL+S CLRTGSFSKALGW L+L +TL +GLRFS+PP L + A APLW+ FTPFWAL+ILLL L+YV++QACC RRYRL+SQHV+C++LY SL L L+SV+ AWRH WE L+HALR +NFS+TL+GIA C VGF ELG YL+AA+E E L TS+GYEDPMPLSRTARGWEPTGA SNWLLLGR+EETA LMRRGG G G Sbjct: 79 GPLERTMKWALTGFAIYLALTFLGVVFLVLKSLEFDKLPPFARTGLILKGYWLIFTPFWAADLVAWMVVLWALHWTCSLRTSGVQHESRIMAPSSHREAQKTLSTEMLPLFQIVMRALLNATPFLLCITAAHILLFIFLQSGGGNFGRPWVSLWLAILPIVLWEMLALISAICLRTGSFSKALGWLLILFATLMVGLRFSSPPFPLSSIPCIRAAHNAPLWVTFTPFWALEILLLATLVYVSIQACCARRYRLSSQHVSCIILYTSSLGFLALASVMFAWRHGTWESGLNHALRLQNFSDTLSGIATLCAVGFAELGFYLVAADEVEHLTTSHGYEDPMPLSRTARGWEPTGARVSNWLLLGRLEETARLMRRGGLAGTSG 459
BLAST of NO07G01900 vs. NCBI_GenBank
Match: CBJ33006.1 (expressed unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 76.6 bits (187), Expect = 2.400e-10 Identity = 99/397 (24.94%), Postives = 165/397 (41.56%), Query Frame = 0 Query: 69 AGPLERMIKRALHGFALFLSFTFLGVLLLVLK-GLGFDKMSGLAKLPPAATSYLAVFVPFWVADFVGWVMVGQTLIGTCSLR---TRDVRDDRRHMVRLTAKEAQNTIS--------------------LEMFPLVQVLVRALLTVTPFLICVTTAHILLALSLERAQ----VPLWLAL-MPLVIWDFLALLSTWCLRTGSFSKALGWFLVLLSTLTLGLRFSTPPPQLLDVAWPVAGDEAPLWL-AFTPFWALQILLLFMLLYVALQACCIRRYRLTSQHVACLVLYAGSLALLTLSSVLVAWRHDAWEVT-----LDHALRFRNFSETLAGIALFCGVGFGELGLYLLAAEEAELLITSNGYEDPMPLSRTARGWEPTGAGASNWLLLGRVEETA 431 + P+E ++ G L F GV+LLVL+ + G A+ + VF PFWV D + +++ + + ++R R RR R + + N +S L+ FPL+Q ++ + L+ TT +L+ L R VP L + PL++ + LL +RT + L W L+ T+ + LR D A G ++ WL P W + +L + YVA R+ + C L +LA T++ +L+ H +++ L++ +A + FC L ++L +LI ++GY+DP+PL T GWE +GAG ++W LLG V A Sbjct: 83 SNPVEDCLRAGAAGLGWCLLSWFTGVVLLVLEYAKRWGAHRGTAEPEYDESPQWLVFSPFWVGDGLALLVLVRVMAKVTNIRFVTPARSRGARRGDARSRSTGSLNDLSGHGSNAGGGGGSRLACAPITLDYFPLLQRVIATSVGAFLVLVVFTTQQVLICLRWGREADAPGVPRPLVVAAPLLLVEAFFLLRVVLIRTYGWLSGLTWLLLFSLTILVALRSGANSGDDADGA--SGGLQSYPWLECLAPLWVVDLLYAGVAGYVAANTMA-GRFVMAPTQGLCFALLLAALAGSTVAEMLLTGDHRLHKLSDKVPRLEYLRLDMPLLLAVASLMAFC------LAVFLSVEHSVSMLINTHGYDDPLPLCETPSGWEWSGAGKASWGLLGDVSVRA 470
BLAST of NO07G01900 vs. NCBI_GenBank
Match: XP_008873337.1 (hypothetical protein H310_09129 [Aphanomyces invadans] >ETV97776.1 hypothetical protein H310_09129 [Aphanomyces invadans]) HSP 1 Score: 68.6 bits (166), Expect = 6.600e-8 Identity = 99/362 (27.35%), Postives = 156/362 (43.09%), Query Frame = 0 Query: 73 ERMIKRALHGFALFLSFTFLGVLLLVLKGLGFDKMSGLAKLPPAATSYLAVFVPFWVADFVGWVMVGQTLIGTCSLRTRDVRDDRRHMVRLTAKEAQNTISLE-MFPLVQVLVRALLTVTPFLICVTTAHILLALSLER-AQVPLWLALMPLVIWDFLALLSTWCLRTGSFSKALGWFLVLLSTLTLGLRFSTPPPQLLDVAWPVAGDEAPL-WL-AFTPFWALQILLLFMLLYVALQACCIRRYRLTSQHVACLVLYAGSLALLTLSSVLVAWRHDAWEVTLDHALRFRNFSE-TLAGIALFCGVGFGELGLYLLAAEEAELLITSNGYEDPMPLSRTARGWEPTGAGASNWLLLGRVEET 430 E+ + L+G +++ FLG L+ L D + G P ++ AVF PFWV + VMVG ++ S+R + RH +T+S E + PL++ ++ P I + A I L + V +++A P++I + ++ ++ + + W L+ + TL L VA A D + L W+ F P + LQ LLLF L V L Y+L V LY +L +T+ V++ +A A SE + + LF G GLYL+ +E L+ S G P+PL+RTA GW A W+LLG + T Sbjct: 74 EKSLAVLLNGVMIYVMCMFLGFGLVALNA---DNVLG----PARHWNWWAVFSPFWVGNL---VMVGAHVL---SIR---AATELRHWAE------TDTVSNEPLLPLLRKILLLYAVSLPLCILLFWAEIAFCAILNNSSNVSVYVAYAPIMIIEVGYVVRYLLCKSRTTLPGIAWILLFVFTLLLAHNSG--------VAATNAPDASGLPWVGVFAPLFVLQ-LLLFGSLVVVLYMQAAGLYKLNQTQVRATALYTVALVAVTIGQVMLVQHMEA------QAGPATTTSEMDVPSLLLFTGWVLASSGLYLVCRQEVMKLMASRGGAVPVPLTRTAGGWVTHHAVVDRWMLLGDIALT 398
BLAST of NO07G01900 vs. NCBI_GenBank
Match: XP_009829638.1 (hypothetical protein H257_06194 [Aphanomyces astaci] >ETV80691.1 hypothetical protein H257_06194 [Aphanomyces astaci]) HSP 1 Score: 67.4 bits (163), Expect = 1.500e-7 Identity = 92/366 (25.14%), Postives = 157/366 (42.90%), Query Frame = 0 Query: 73 ERMIKRALHGFALFLSFTFLGVLLLVLKGLGFDKMSGLAKLPPAATSYLAVFVPFWVADFVGWVMVGQTLIGTCSLRTRDVRDDRRHMVRLTAKEAQNTISLEMFPLVQVLVRALLTVTPFLICVTTAHI-LLALSLERAQVPLWLALMPLVIWDFLALLSTWCLRTGSFSKALGWFLVLLSTLTLGLRFSTPPPQLLDVAWPVAGDEAPL-WLA-FTPFWALQILLLFMLLYVALQACCIRRYRLTSQHVACLVLYAGSLALLTLSSVLVAWRHDAWEVTLDHALRFRNFSETLAGIALFCGVGFGELGLYLLAAEEAELLITSNGYEDPMPLSRTARGWEPTGAGASNWLLLGRVEETATLMRR 436 E+ + L+G +++ F+G L+ L D + G P ++ VF+PFWVA+ V ++G L R + R+ E + + PL++ ++ P + A + A+ + + + +++A PL+I + ++ ++ + + W +LL T TL L ++ A P + + A L W+A F P + LQ L+LF L V L YRL S V LY+ +L T +++ +H + D A + + LF GLY++ +E L+ S G P+PL+RTA GW A W+LLG V T + R Sbjct: 73 EQSLAVLLNGVMIYVMCVFVGFGLIALNA---DNVLG----PARHWNWWVVFLPFWVANLV--------MLGAHVLSIRAATELRQW------AETDMMSNEPLLPLLRKILLLYAVSMPLCFLLFWAEVAFCAILSDSSDISVYVAYAPLMIIEVGYVVRYLLCKSRTTLPGVSW--ILLFTFTLLLAHNSD-----IAAKPTSANSAGLPWVAVFAPLFVLQ-LVLFGSLAVVLYMQAAGLYRLNSTQVRATALYSIALVAATTGQIMLV-QHMELQQGADRATA---TEMDVPSLLLFTAWIVASAGLYIVCRQEVAKLMASRGGAVPVPLTRTADGWVTNHAVMDRWMLLGDVSLTGVGLAR 405 The following BLAST results are available for this feature:
BLAST of NO07G01900 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 5
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01900 ID=NO07G01900|Name=NO07G01900|organism=Nannochloropsis oceanica|type=gene|length=1804bpback to top protein sequence of NO07G01900.1 >NO07G01900.1-protein ID=NO07G01900.1-protein|Name=NO07G01900.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bpback to top Synonyms
Publications
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