NO07G01870, NO07G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01870 vs. NCBI_GenBank
Match: KFH65517.1 (hypothetical protein MVEG_08994 [Mortierella verticillata NRRL 6337]) HSP 1 Score: 65.9 bits (159), Expect = 1.800e-7 Identity = 39/108 (36.11%), Postives = 55/108 (50.93%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNR--KWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKP 115 G G L I V S L KL N + +K LH +++ T N K ++ FNGF DL + + KWTV L+D LF LE GGD++ ++ L+ +L KP Sbjct: 54 GKGVKLSEIPTVNSNLDKLKNTDETIKGLHRVLFGRATTIKNPKANLKEFNGF---ADLTEKEEEHIEEKFGKWTVAGLRDLIELFNLEAGGDKDAVLEHLMVFLKKP 158
BLAST of NO07G01870 vs. NCBI_GenBank
Match: OAQ22818.1 (hypothetical protein K457DRAFT_279481 [Mortierella elongata AG-77]) HSP 1 Score: 65.9 bits (159), Expect = 1.800e-7 Identity = 36/108 (33.33%), Postives = 60/108 (55.56%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFP--AGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKP 115 G G+ LG IA V + L KL + + +K LH L++ + K ++AFNGF + + + +++ KWTV L++ +F LE GGD++ L+ RL+ +L P Sbjct: 53 GKGAKLGSIATVNANLDKLKSSDETVKGLHRLLFGRVAPSKSPKNDLKAFNGFEHLSEKEEEALEEKLG---KWTVGGLRELIDVFNLEAGGDKDALLERLMVFLKSP 157
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_001702993.1 (predicted protein [Chlamydomonas reinhardtii] >PNW75115.1 hypothetical protein CHLRE_12g513150v5 [Chlamydomonas reinhardtii]) HSP 1 Score: 64.3 bits (155), Expect = 5.100e-7 Identity = 40/117 (34.19%), Postives = 60/117 (51.28%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNR--KWTVTVLKDAATLFGLEKG----GDRETLIGRLVKYLNKPVTLKE 120 G G+ LG I V ++ KL D ++L +LH L++K PGT RKK + F+GF D + + K T+ VL +F L +G G +E+ I RL+K+L P L + Sbjct: 73 GKGTKLGEIPNVHFLVGKLKTDDEVLTTLHSLLFKRPGTANRRKKNVYEFSGFAFEEDEKDKEHEKAKEKLGKLTIKVLDGILDVFELPRGAGDEGKKESKIERLMKFLESPKQLSD 189
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_002675947.1 (predicted protein [Naegleria gruberi] >EFC43203.1 predicted protein [Naegleria gruberi]) HSP 1 Score: 64.3 bits (155), Expect = 5.100e-7 Identity = 33/61 (54.10%), Postives = 43/61 (70.49%), Query Frame = 0 Query: 148 KRTLSSYMLYAKDVRAEVVAEFPALKVTEIGSKIGEKWRGLSEEEKAKYTAKAAKLKADAN 209 KR LSSYML+++ R +VAE P LKVTE+ +GEKW +++ EKA Y KAA+LKA N Sbjct: 121 KRPLSSYMLFSQTYRKSLVAENPTLKVTEVAKLVGEKWGKMNDAEKAPYVNKAAELKAAYN 181
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_013417083.1 (protein DEK [Lingula anatina]) HSP 1 Score: 64.3 bits (155), Expect = 5.100e-7 Identity = 39/124 (31.45%), Postives = 63/124 (50.81%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPVTLKEVGSTAGASSKKKS 133 G G LG ++ L K ++ LK LH ++Y G+ KK IR F+GFP +D +++ K+ + VLK + LEK G ++T++ R++ +L P K+ G A K+KS Sbjct: 115 GVGIKLGACVRIEHFLNKTKSEE--LKPLHRILYNRVGSASEIKKNIRQFSGFPFESDSTEFEKKVASLNKYHIPVLKLICEVLDLEKSGAKDTIVTRIMDFLMNP---KDSGRAPPAPKKRKS 233
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_002164643.1 (PREDICTED: protein DEK-like [Hydra vulgaris]) HSP 1 Score: 63.9 bits (154), Expect = 6.700e-7 Identity = 45/122 (36.89%), Postives = 62/122 (50.82%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKL-PNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPVTLKEVGSTAGASSK 130 G G LG I YV+ M+ K P D LK+LH L+Y PG KK IR F G+P T S + ++ LK + + LEKGGD+ L +L+++L KPV + G T + K Sbjct: 99 GKGMKLGDIQYVKYMIDKTRPED---LKTLHKLLYFKPGKNTTLKKEIRTFCGYPFEESSELSTRVSSMMERVSIPELKFISGVLSLEKGGDKGKLKEKLLEFLMKPV---DTGKTIPGTKK 214
BLAST of NO07G01870 vs. NCBI_GenBank
Match: CRK35341.1 (hypothetical protein BN1708_006693, partial [Verticillium longisporum]) HSP 1 Score: 63.5 bits (153), Expect = 8.700e-7 Identity = 35/99 (35.35%), Postives = 55/99 (55.56%), Query Frame = 0 Query: 102 TLIGRLVKYLNKPVTLKEVGSTAGASSKKKSRENPAAMAKKGSDGVKRTLSSYMLYAKDVRAEVVAEFPALKVTEIGSKIGEKWRGLSEEEKAKYTAKA 201 T + K + + + + + + GA KK R AKK + KR LS+YM +A + R V AE P + ++G +GE+W+GLSE+++A Y AKA Sbjct: 6 TTLSTFTKPILRTIKMPKAAAKRGAGEKKAKR------AKKDPNAPKRGLSAYMFFANEQRENVRAEHPGISFGQVGRNLGERWKGLSEKQRAPYEAKA 98
BLAST of NO07G01870 vs. NCBI_GenBank
Match: PSN38807.1 (hypothetical protein C0J52_07906 [Blattella germanica]) HSP 1 Score: 63.5 bits (153), Expect = 8.700e-7 Identity = 43/124 (34.68%), Postives = 62/124 (50.00%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPVTLKEVGSTAGASSKKKS 133 G G+ALG I + +ML K +D LK LH +++ G KK +R FNGF + + S +K V VLK + LEK G+RE + R+V +L +P K+ G A K+S Sbjct: 121 GKGTALGDIPRIDAMLQKYKSDE--LKFLHRVLFNRIGKSTMIKKNLRKFNGFDFDKSSDQFEKKKSAVQKLEVRVLKSICGILDLEKKGNREEISERIVNFLMEP---KDSGKPAPTPRPKRS 239 The following BLAST results are available for this feature:
BLAST of NO07G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01870 ID=NO07G01870|Name=NO07G01870|organism=Nannochloropsis oceanica|type=gene|length=801bpback to top protein sequence of NO07G01870.1 >NO07G01870.1-protein ID=NO07G01870.1-protein|Name=NO07G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bpback to top Synonyms
Publications
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