NO07G01870, NO07G01870 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01870 vs. NCBI_GenBank
Match: CBJ26704.1 (similar to DEK oncogene (DNA binding) [Ectocarpus siliculosus]) HSP 1 Score: 115.2 bits (287), Expect = 2.500e-22 Identity = 67/198 (33.84%), Postives = 100/198 (50.51%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPVTLKEVGSTA----GASSKKKSRENPAAMAKKGSDGVKRTLSSYMLYAKDVRAEVVAEFPALKVTEIGSKIGEKWRGLSEEEKAKYTAKAAK 203 GSG+ L I V L K+ DHDLLK+ H +Y G K RKK IR+F+GFP + +++ ++KWTV L+D TL GLEKGGD+ ++ R+V +L P + G A L+ YM++ ++ RA+V+ P LK TE+ +K+G+ W S+ +K KY + K Sbjct: 5 GSGTKLADIPIVPVNLNKIDADHDLLKAFHAFLYGGVGKKTVRKKNIRSFSGFPDDDGKDARMKKLTESKKWTVAALRDLCTLLGLEKGGDKAEVVDRIVSFLASPDPSESKGPVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPLNGYMMFTREARAKVLKADPGLKPTEVTAKMGQMWAECSDAQKEKYKQQGIK 202
BLAST of NO07G01870 vs. NCBI_GenBank
Match: KOO28658.1 (protein dek [Chrysochromulina sp. CCMP291]) HSP 1 Score: 84.7 bits (208), Expect = 3.700e-13 Identity = 59/200 (29.50%), Postives = 97/200 (48.50%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPA-GTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPV-TLKEVGSTAGASSKKKSRENPAAMAKKGSDGVKRTLSSYMLYAKDVRAEVVAEFPALKVTEIGSKIGEKWRGLSEEEKAKYTAKAAKLKAD 207 G+G+ LG I V+ ++ K P + LK H + + PG + KK +R F+GF G +L +S K ++K L G + + LV +L +P + K+ + + +S + K D +KR S Y+LY + R +V E P T++ + EKW+G+S+E + KY A+AA LKA+ Sbjct: 43 GAGTKLGDIENVKILIDKHPASSEELKKFHAVCFGRPGKQTEVKKNLREFSGFTLDGAELEKKKASVS---KLDGKMIKTLLALCDQPTSGTKAENVEALVAFLQEPAESGKKSLALKSGEKRARSEKKXXXXXXKAKDELKRPPSGYLLYCNNKREKVKQENPDASATDMMKILAEKWKGISDERRQKYEAEAAALKAE 239
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_014161108.1 (hypothetical protein SARC_00683 [Sphaeroforma arctica JP610] >KNC87206.1 hypothetical protein SARC_00683 [Sphaeroforma arctica JP610]) HSP 1 Score: 79.0 bits (193), Expect = 2.000e-11 Identity = 58/198 (29.29%), Postives = 91/198 (45.96%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGN-RKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPVTLKEVGSTAGASSKKKSRENPAAMAKKGSDGVKRTLSSYMLYAKDVRAEVVAEFPALKVTEIGSKIGEKWRGLSEEEKAKYTAKAAKLKA 206 G G+ LG I+ ++ L K D L LH L + + G++L +K +R F GF ++ + D+ + K + L+ + + GD+ETL+ ++ +LN P + V S+Y L+ K R + V +FP +K TEI SK+ E W+ S+EEKAKYT A KA Sbjct: 143 GKGTPLGQISMIEEKLKKHKTDD--LHDLHRLCFGSKGSRLEVRKNLRLFKGFDYDSN-PAIKDKTQNSLEKRHMPALRTMCDVICISHSGDKETLMDNIMDFLNSPNESECVAEKKXXXXXXXXXXXXXXXXXXXXXXXXXAPSAYNLFIKHNRQKAVTKFPDVKNTEIMSKMSEMWKECSKEEKAKYTKMAEDAKA 337
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_002947942.1 (hypothetical protein VOLCADRAFT_120551 [Volvox carteri f. nagariensis] >EFJ50930.1 hypothetical protein VOLCADRAFT_120551 [Volvox carteri f. nagariensis]) HSP 1 Score: 74.7 bits (182), Expect = 3.800e-10 Identity = 48/131 (36.64%), Postives = 68/131 (51.91%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTD-----LNGVTDRISGNRKWTVTVLKDAATLFGLEKG----GDRETLIGRLVKYLNKPVTLKEVGSTAGASSKK 131 G G+ LG I V +L KL D +L+ SLH L++K PGT RKK + F+G D L + +R+ KWT+ +L A +F L +G G +E + RL+K+L +P L E A A KK Sbjct: 69 GKGTKLGDIPNVHYLLGKLKTDDELVTSLHNLLFKRPGTSHRRKKNLYEFSGLSFDDDEKEKELEKLQERLG---KWTIPLLNGALDVFELPRGNGDEGKKEAKVERLLKFLEEPKKLSEKDLAAEALKKK 196
BLAST of NO07G01870 vs. NCBI_GenBank
Match: KRT86183.1 (hypothetical protein AMK59_1579, partial [Oryctes borbonicus]) HSP 1 Score: 73.2 bits (178), Expect = 1.100e-9 Identity = 44/124 (35.48%), Postives = 67/124 (54.03%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKPVTLKEVGSTAGASSKKKS 133 G G ALG I + + +++ ND LK LH L+YKTPG KK I+ FNGF D + ++S +K+ V LK + LEK G++E + R+V++L +P K+ G G K++ Sbjct: 156 GRGLALGDIPRIDASISRFKNDD--LKLLHRLLYKTPGKTTMIKKNIKKFNGFDFAKDSDEYGKKLSSVQKFEVKQLKSVCEMLDLEKKGNKEEIGERIVEFLIEP---KDSGKPVGGGRPKRT 274
BLAST of NO07G01870 vs. NCBI_GenBank
Match: PNH05207.1 (Protein DEK [Tetrabaena socialis]) HSP 1 Score: 72.0 bits (175), Expect = 2.500e-9 Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNG--FPAG---TDLNGVTDRISGNRKWTVTVLKDAATLFGLEKG-GD---RETLIGRLVKYLNKPVTL--KEVGSTA 125 G G+ LG I V L KL D +LL LH +++K PGT RKK + F+G F G +L VTDR+ KWT+ +L A +F L +G GD +E+ I RL ++L P L K++ +TA Sbjct: 100 GKGTKLGEIPNVHFQLGKLKTDDELLSGLHNVLFKRPGTANRRKKNLYEFSGLTFDDGEKEKELEKVTDRLG---KWTIALLNSALDVFELPRGTGDESKKESKIERLAQFLEAPSKLSDKDLAATA 223
BLAST of NO07G01870 vs. NCBI_GenBank
Match: KXZ47395.1 (hypothetical protein GPECTOR_35g833 [Gonium pectorale]) HSP 1 Score: 70.9 bits (172), Expect = 5.500e-9 Identity = 40/117 (34.19%), Postives = 61/117 (52.14%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNG--FPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKG----GDRETLIGRLVKYLNKPVTLKE 120 G G+ LG I V +L KL D +LL LH L++K PGT + R+K + F+G F G + KWT+ +L A +F L +G G +E + RL+K+L +P + + Sbjct: 66 GKGNKLGEIPNVHFLLGKLKTDDELLTGLHSLLFKRPGTTMRRRKNLYEFSGLTFEEGDQAKEMEKLSEKLGKWTIGLLNSALDVFELPRGQGDEGKKEAKVERLLKFLEEPKRMSD 182
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_010883560.1 (PREDICTED: protein DEK isoform X1 [Esox lucius]) HSP 1 Score: 67.0 bits (162), Expect = 7.900e-8 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKP 115 GSG LG IA V L KL LK LH++++ PG +K +R FNGFP D + + K T L+ T+ LEKGG++ LI R++ +L P Sbjct: 94 GSGDKLGDIARVNHQLGKLKVPD--LKPLHIILFDMPGKIATMRKNMRLFNGFPFEVDSDPYLKKKERMMKLTCAKLRTICTVLDLEKGGNQSVLIDRIIHFLMSP 197
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_010883561.1 (PREDICTED: protein DEK isoform X2 [Esox lucius] >XP_010883562.1 PREDICTED: protein DEK isoform X2 [Esox lucius]) HSP 1 Score: 67.0 bits (162), Expect = 7.900e-8 Identity = 39/106 (36.79%), Postives = 54/106 (50.94%), Query Frame = 0 Query: 9 GSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTDLNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKP 115 GSG LG IA V L KL LK LH++++ PG +K +R FNGFP D + + K T L+ T+ LEKGG++ LI R++ +L P Sbjct: 88 GSGDKLGDIARVNHQLGKLKVPD--LKPLHIILFDMPGKIATMRKNMRLFNGFPFEVDSDPYLKKKERMMKLTCAKLRTICTVLDLEKGGNQSVLIDRIIHFLMSP 191
BLAST of NO07G01870 vs. NCBI_GenBank
Match: XP_015805042.1 (PREDICTED: protein DEK [Nothobranchius furzeri] >XP_015805043.1 PREDICTED: protein DEK [Nothobranchius furzeri] >XP_015805044.1 PREDICTED: protein DEK [Nothobranchius furzeri] >XP_015805046.1 PREDICTED: protein DEK [Nothobranchius furzeri]) HSP 1 Score: 66.6 bits (161), Expect = 1.000e-7 Identity = 41/111 (36.94%), Postives = 55/111 (49.55%), Query Frame = 0 Query: 7 GGGSGSALGHIAYVQSMLTKLPNDHDLLKSLHMLMYKTPGTKLNRKKTIRAFNGFPAGTD---LNGVTDRISGNRKWTVTVLKDAATLFGLEKGGDRETLIGRLVKYLNKP 115 G GSG LG I +T++ LK LHML++ PG KK +R FNGFP D N +++ N +T T LK T+ LEK G LI R++ +L P Sbjct: 73 GDGSGDKLGDIPRTNHQITRMKLVD--LKQLHMLLFDRPGKMATLKKNLRLFNGFPFDVDSEQYNKKREKLLKNSSFTNTKLKVVCTVLDLEKKGTHSDLIDRILTFLISP 181 The following BLAST results are available for this feature:
BLAST of NO07G01870 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01870 ID=NO07G01870|Name=NO07G01870|organism=Nannochloropsis oceanica|type=gene|length=801bpback to top protein sequence of NO07G01870.1 >NO07G01870.1-protein ID=NO07G01870.1-protein|Name=NO07G01870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=210bpback to top Synonyms
Publications
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