NO07G01800, NO07G01800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_013458246.1 (protein ALWAYS EARLY 3 isoform X1 [Medicago truncatula] >KEH32277.1 always EARLY-like protein [Medicago truncatula]) HSP 1 Score: 109.0 bits (271), Expect = 6.800e-20 Identity = 62/158 (39.24%), Postives = 91/158 (57.59%), Query Frame = 0 Query: 142 MLLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 ML++ LS RR+ ++E+FYS +D +F++ F E L+ VGL HV +LTR EW +R+ +GR RR S T+E+ +L +YR+ VR + ++ PL+VGQ V A H K + + G ILT D+ R YRVQF++ EL D D Sbjct: 647 MLINCLSSHQTRRWCISEWFYSAIDYPWFSKREFVEYLEHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLNQYRESVRSHYAEVLAGTKEGLPADLAQPLIVGQRVIAIHPKTREIHDGSILTVDHCR--YRVQFDQHELGVEFVMDID 802
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_003609635.2 (protein ALWAYS EARLY 3 isoform X2 [Medicago truncatula] >AES91832.2 always EARLY-like protein [Medicago truncatula]) HSP 1 Score: 109.0 bits (271), Expect = 6.800e-20 Identity = 62/158 (39.24%), Postives = 91/158 (57.59%), Query Frame = 0 Query: 142 MLLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 ML++ LS RR+ ++E+FYS +D +F++ F E L+ VGL HV +LTR EW +R+ +GR RR S T+E+ +L +YR+ VR + ++ PL+VGQ V A H K + + G ILT D+ R YRVQF++ EL D D Sbjct: 612 MLINCLSSHQTRRWCISEWFYSAIDYPWFSKREFVEYLEHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLNQYRESVRSHYAEVLAGTKEGLPADLAQPLIVGQRVIAIHPKTREIHDGSILTVDHCR--YRVQFDQHELGVEFVMDID 767
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_010241815.1 (PREDICTED: protein ALWAYS EARLY 3-like isoform X1 [Nelumbo nucifera]) HSP 1 Score: 109.0 bits (271), Expect = 6.800e-20 Identity = 62/158 (39.24%), Postives = 89/158 (56.33%), Query Frame = 0 Query: 142 MLLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 ML H LS P LRR+ + E+FYS +D +F + F E L+ VGL H+ +LTR EW +R+ +G+ RR+S +E+++L +YR+ VR ++ PL VGQ V A H K + + G +LT D R + RVQF+RPEL D D Sbjct: 645 MLSHCLSSPMLRRWCVFEWFYSAIDYPWFAKREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSEQFLKEEKEKLEQYRESVRTHYAELRAGTREGLPTDLARPLSVGQRVIACHPKTREIHDGSVLTVD--RNRCRVQFDRPELGVEFVMDID 800
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_010241822.1 (PREDICTED: protein ALWAYS EARLY 3-like isoform X2 [Nelumbo nucifera]) HSP 1 Score: 109.0 bits (271), Expect = 6.800e-20 Identity = 62/158 (39.24%), Postives = 89/158 (56.33%), Query Frame = 0 Query: 142 MLLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 ML H LS P LRR+ + E+FYS +D +F + F E L+ VGL H+ +LTR EW +R+ +G+ RR+S +E+++L +YR+ VR ++ PL VGQ V A H K + + G +LT D R + RVQF+RPEL D D Sbjct: 566 MLSHCLSSPMLRRWCVFEWFYSAIDYPWFAKREFVEYLNHVGLGHIPRLTRVEWGVIRSSLGKPRRLSEQFLKEEKEKLEQYRESVRTHYAELRAGTREGLPTDLARPLSVGQRVIACHPKTREIHDGSVLTVD--RNRCRVQFDRPELGVEFVMDID 721
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_002982487.1 (protein ALWAYS EARLY 3 [Selaginella moellendorffii] >XP_024543287.1 protein ALWAYS EARLY 3 [Selaginella moellendorffii] >EFJ16240.1 hypothetical protein SELMODRAFT_421903 [Selaginella moellendorffii]) HSP 1 Score: 108.6 bits (270), Expect = 8.900e-20 Identity = 76/192 (39.58%), Postives = 105/192 (54.69%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVR----DIQQGR--IVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSDIASNGASSLLLIGEPSRKQRLQDNDISIH 329 LLH LS+P +R++ + E+FYS +D +F +N F E L+ GL HV KLTRTEW +R+ +G+ RR+S ER++L YR VR DI+ + PP ++ PL VGQ V A H K + G ILT D R + RVQFER EL DI + + L + + RK+R+ D S H Sbjct: 354 LLHCLSIPRVRQWCVYEWFYSAIDLPWFARNEFVEYLNHAGLGHVSKLTRTEWTVIRSSLGKPRRLSQKFLQVEREKLEAYRDTVRAHYHDIRNDKSGCCLPP-----DLARPLTVGQRVIARHPKNGEIHDGRILTVD--RNRCRVQFERTELGVEFV--LDINAMPVNPLENMSDIMRKRRIIDLSSSGH 536
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_002981008.1 (protein ALWAYS EARLY 3 [Selaginella moellendorffii] >XP_024541865.1 protein ALWAYS EARLY 3 [Selaginella moellendorffii] >EFJ17709.1 hypothetical protein SELMODRAFT_420594 [Selaginella moellendorffii]) HSP 1 Score: 108.6 bits (270), Expect = 8.900e-20 Identity = 76/192 (39.58%), Postives = 105/192 (54.69%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVR----DIQQGR--IVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSDIASNGASSLLLIGEPSRKQRLQDNDISIH 329 LLH LS+P +R++ + E+FYS +D +F +N F E L+ GL HV KLTRTEW +R+ +G+ RR+S ER++L YR VR DI+ + PP ++ PL VGQ V A H K + G ILT D R + RVQFER EL DI + + L + + RK+R+ D S H Sbjct: 354 LLHCLSIPRVRQWCVYEWFYSAIDLPWFARNEFVEYLNHAGLGHVSKLTRTEWTVIRSSLGKPRRLSQKFLQVEREKLEAYRDTVRAHYHDIRNDKSGCCLPP-----DLARPLTVGQRVIARHPKNGEIHDGRILTVD--RNRCRVQFERTELGVEFV--LDINAMPVNPLENMSDIMRKRRIIDLSSSGH 536
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_007154248.1 (hypothetical protein PHAVU_003G102900g [Phaseolus vulgaris] >ESW26242.1 hypothetical protein PHAVU_003G102900g [Phaseolus vulgaris]) HSP 1 Score: 108.2 bits (269), Expect = 1.200e-19 Identity = 62/157 (39.49%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S T+E+ +L EYR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++ EL D D Sbjct: 103 LINCLSSHQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLHEYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHGGSVLTVDHCR--YRVQFDQLELGVEFVMDID 257
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_003550195.1 (PREDICTED: protein ALWAYS EARLY 3-like isoform X1 [Glycine max]) HSP 1 Score: 107.8 bits (268), Expect = 1.500e-19 Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S +E+ +L +YR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++PEL D D Sbjct: 622 LINCLSSYQMRRWCTLEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKNKLNQYRESVRSHYAEILSGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCR--YRVQFDQPELGVEFVMDID 776
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_006600340.1 (PREDICTED: protein ALWAYS EARLY 3-like isoform X2 [Glycine max] >KRH02225.1 hypothetical protein GLYMA_17G024600 [Glycine max] >KRH02226.1 hypothetical protein GLYMA_17G024600 [Glycine max]) HSP 1 Score: 107.8 bits (268), Expect = 1.500e-19 Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S +E+ +L +YR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++PEL D D Sbjct: 615 LINCLSSYQMRRWCTLEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKNKLNQYRESVRSHYAEILSGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCR--YRVQFDQPELGVEFVMDID 769
BLAST of NO07G01800 vs. NCBI_GenBank
Match: KHN03378.1 (Protein ALWAYS EARLY 3 [Glycine soja]) HSP 1 Score: 107.8 bits (268), Expect = 1.500e-19 Identity = 61/157 (38.85%), Postives = 89/157 (56.69%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S +E+ +L +YR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++PEL D D Sbjct: 622 LINCLSSYQMRRWCTLEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKNKLNQYRESVRSHYAEILSGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCR--YRVQFDQPELGVEFVMDID 776 The following BLAST results are available for this feature:
BLAST of NO07G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01800 ID=NO07G01800|Name=NO07G01800|organism=Nannochloropsis oceanica|type=gene|length=2452bpback to top protein sequence of NO07G01800.1 >NO07G01800.1-protein ID=NO07G01800.1-protein|Name=NO07G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=790bpback to top Synonyms
Publications
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