NO07G01800, NO07G01800 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01800 vs. NCBI_GenBank
Match: EWM27156.1 (always early protein 3 [Nannochloropsis gaditana]) HSP 1 Score: 139.0 bits (349), Expect = 6.100e-29 Identity = 73/165 (44.24%), Postives = 106/165 (64.24%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSDIASNGASS 308 L SLS ++RRFA+ EFFY+TVDR Y N N F + LD +GL H++K++RTEW+ VR F GRRRR+SP QERQ+L ++R++ R Q+ + + ++P L VG V AY K L G ILT +Y+ +YR+QFE P L +++C D++++ G S Sbjct: 42 LAQSLS-TSVRRFAVTEFFYATVDRGYLNSNCFGKRLDELGLRHIRKISRTEWDIVRLFFGRRRRLSPLFLRQERQKLHKFRRMARISQRQSVNH--FDLENQMPLYLTVGSNVQAYDIKRNFLGRGKILTANYDISRYRIQFEDPSLGTILCADTELSIQGIPS 203
BLAST of NO07G01800 vs. NCBI_GenBank
Match: GAQ78354.1 (hypothetical protein KFL_000120020 [Klebsormidium nitens]) HSP 1 Score: 112.8 bits (281), Expect = 4.700e-21 Identity = 74/181 (40.88%), Postives = 108/181 (59.67%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRD--IQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSDIASNGASSLLLIGEPSRKQRLQ 322 LLH L+ +RR+ + E+FYS +D +F +N F E L+ GL V++LTRTEW +R+ +G RR+S +ER++L YR+ R + G+ + P E+P PL VGQ VTA H + + +A G ILT D +G+ RVQF+R EL+S I QD D+ A L + RK+RL+ Sbjct: 691 LLHCLN-SRVRRWCLYEWFYSALDYPWFARNEFVEYLEHAGLGGVKRLTRTEWGVIRSSLGHPRRLSSVFLREEREKLAAYREAARAAYAEAGQGGDVPA----ELPAPLAVGQRVTAKHPRTRQIAEGAILTVD-AKGRSRVQFDRRELASEIVQDIDMMP--ADPLKNMPATLRKKRLE 863
BLAST of NO07G01800 vs. NCBI_GenBank
Match: ERM99097.1 (hypothetical protein AMTR_s00101p00125820 [Amborella trichopoda]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVR----DIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L+H LS P LRR+ E+FYS +D +F Q+ F E L+ V L HV +LTR EW +R+ +G+ RR+S +ER++L +YR+ VR D++ G P +F P PL VGQ V A H K + + G ILT D R RVQF+RPEL D D Sbjct: 672 LVHCLSSPKLRRWCTYEWFYSAIDYPWFAQSEFVEYLNHVRLGHVPRLTRVEWGVIRSSLGKTRRLSKRFLQEEREKLEKYRESVRKHYSDLRNGLREGLPADF----PRPLSVGQRVIACHPKTREIHDGSILTIDGNR--CRVQFDRPELGVEFVLDID 826
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_011620753.1 (protein ALWAYS EARLY 3 isoform X1 [Amborella trichopoda] >XP_020518489.1 protein ALWAYS EARLY 3 isoform X1 [Amborella trichopoda] >XP_020518490.1 protein ALWAYS EARLY 3 isoform X1 [Amborella trichopoda]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVR----DIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L+H LS P LRR+ E+FYS +D +F Q+ F E L+ V L HV +LTR EW +R+ +G+ RR+S +ER++L +YR+ VR D++ G P +F P PL VGQ V A H K + + G ILT D R RVQF+RPEL D D Sbjct: 659 LVHCLSSPKLRRWCTYEWFYSAIDYPWFAQSEFVEYLNHVRLGHVPRLTRVEWGVIRSSLGKTRRLSKRFLQEEREKLEKYRESVRKHYSDLRNGLREGLPADF----PRPLSVGQRVIACHPKTREIHDGSILTIDGNR--CRVQFDRPELGVEFVLDID 813
BLAST of NO07G01800 vs. NCBI_GenBank
Match: KOM33532.1 (hypothetical protein LR48_Vigan01g308800 [Vigna angularis]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 63/157 (40.13%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S T+E+ +L EYR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++PEL D D Sbjct: 618 LINCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLHEYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCR--YRVQFDQPELGVEFVMDVD 772
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_014509084.1 (protein ALWAYS EARLY 1 [Vigna radiata var. radiata] >XP_014509085.1 protein ALWAYS EARLY 1 [Vigna radiata var. radiata] >XP_014509086.1 protein ALWAYS EARLY 1 [Vigna radiata var. radiata]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 63/157 (40.13%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S T+E+ +L EYR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++PEL D D Sbjct: 619 LINCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLHEYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCR--YRVQFDQPELGVEFVMDVD 773
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_017438439.1 (PREDICTED: protein ALWAYS EARLY 3 [Vigna angularis] >XP_017438443.1 PREDICTED: protein ALWAYS EARLY 3 [Vigna angularis] >XP_017438447.1 PREDICTED: protein ALWAYS EARLY 3 [Vigna angularis] >XP_017438455.1 PREDICTED: protein ALWAYS EARLY 3 [Vigna angularis] >XP_017438460.1 PREDICTED: protein ALWAYS EARLY 3 [Vigna angularis] >XP_017438465.1 PREDICTED: protein ALWAYS EARLY 3 [Vigna angularis] >BAT77157.1 hypothetical protein VIGAN_01525000 [Vigna angularis var. angularis]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 63/157 (40.13%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S T+E+ +L EYR+ VR + ++ PL+VGQ V A H K + + G +LT D+ R YRVQF++PEL D D Sbjct: 618 LINCLSSYQMRRWCTFEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLTEEKHKLHEYRESVRSHYAEILAGTKEGLPTDLAQPLIVGQRVIAIHPKTREIHDGSVLTVDHCR--YRVQFDQPELGVEFVMDVD 772
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_020518492.1 (protein ALWAYS EARLY 3 isoform X3 [Amborella trichopoda]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVR----DIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L+H LS P LRR+ E+FYS +D +F Q+ F E L+ V L HV +LTR EW +R+ +G+ RR+S +ER++L +YR+ VR D++ G P +F P PL VGQ V A H K + + G ILT D R RVQF+RPEL D D Sbjct: 659 LVHCLSSPKLRRWCTYEWFYSAIDYPWFAQSEFVEYLNHVRLGHVPRLTRVEWGVIRSSLGKTRRLSKRFLQEEREKLEKYRESVRKHYSDLRNGLREGLPADF----PRPLSVGQRVIACHPKTREIHDGSILTIDGNR--CRVQFDRPELGVEFVLDID 813
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_020518491.1 (protein ALWAYS EARLY 3 isoform X2 [Amborella trichopoda]) HSP 1 Score: 111.7 bits (278), Expect = 1.100e-20 Identity = 69/161 (42.86%), Postives = 93/161 (57.76%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVR----DIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L+H LS P LRR+ E+FYS +D +F Q+ F E L+ V L HV +LTR EW +R+ +G+ RR+S +ER++L +YR+ VR D++ G P +F P PL VGQ V A H K + + G ILT D R RVQF+RPEL D D Sbjct: 657 LVHCLSSPKLRRWCTYEWFYSAIDYPWFAQSEFVEYLNHVRLGHVPRLTRVEWGVIRSSLGKTRRLSKRFLQEEREKLEKYRESVRKHYSDLRNGLREGLPADF----PRPLSVGQRVIACHPKTREIHDGSILTIDGNR--CRVQFDRPELGVEFVLDID 811
BLAST of NO07G01800 vs. NCBI_GenBank
Match: XP_004508289.1 (PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Cicer arietinum] >XP_012573515.1 PREDICTED: protein ALWAYS EARLY 3 isoform X1 [Cicer arietinum] >XP_012573516.1 PREDICTED: protein ALWAYS EARLY 3 isoform X1 [Cicer arietinum] >XP_012573517.1 PREDICTED: protein ALWAYS EARLY 3 isoform X1 [Cicer arietinum] >XP_012573518.1 PREDICTED: protein ALWAYS EARLY 3 isoform X1 [Cicer arietinum] >XP_012573519.1 PREDICTED: protein ALWAYS EARLY 3 isoform X1 [Cicer arietinum]) HSP 1 Score: 110.2 bits (274), Expect = 3.100e-20 Identity = 62/157 (39.49%), Postives = 90/157 (57.32%), Query Frame = 0 Query: 143 LLHSLSMPALRRFAMAEFFYSTVDRAYFNQNTFQESLDAVGLSHVQKLTRTEWNRVRAFIGRRRRMSPALFTQERQRLREYRQVVRDIQQGRIVEPPPEFTFEVPTPLVVGQAVTAYHEKAKLLACGHILTCDYERGQYRVQFERPELSSLICQDSD 300 L++ LS +RR+ +E+FYS +D +F++ F E LD VGL HV +LTR EW +R+ +GR RR S +E+ +L +YR+ VR + ++ PL+VGQ V A H K + + G ILT D+ R YRVQF++PEL D D Sbjct: 618 LINCLSSYQMRRWCTSEWFYSAIDYPWFSKREFVEYLDHVGLGHVPRLTRIEWGVIRSSLGRPRRFSEQFLIEEKHKLNQYRESVRSHYAEVLAGTKEGLPVDLAQPLIVGQRVIAIHPKTREIHDGSILTVDHCR--YRVQFDQPELGVEFVMDID 772 The following BLAST results are available for this feature:
BLAST of NO07G01800 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01800 ID=NO07G01800|Name=NO07G01800|organism=Nannochloropsis oceanica|type=gene|length=2452bpback to top protein sequence of NO07G01800.1 >NO07G01800.1-protein ID=NO07G01800.1-protein|Name=NO07G01800.1|organism=Nannochloropsis oceanica|type=polypeptide|length=790bpback to top Synonyms
Publications
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