NO07G01650, NO07G01650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01650 vs. NCBI_GenBank
Match: EWM27147.1 (thioredoxin m [Nannochloropsis gaditana]) HSP 1 Score: 258.5 bits (659), Expect = 1.600e-65 Identity = 133/176 (75.57%), Postives = 149/176 (84.66%), Query Frame = 0 Query: 2 MQLKNKQALGVC-LLLVAALAQAFMPATLSGMQRVHRHSRPRGGPVMMAGDSGVLKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASELTKMVNHYCFGAPLDGATAAADEEIKDV 177 + L KQ L V LL++ AL QAF+P ++S ++ V S P+G P+MMAG+SGVLKV+GEELEK LAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEP IASALKVYGLPTIFFIREGQL+HR+EGAMPASELTK+VNHYCFGAP +EEIKDV Sbjct: 6 LPLLRKQCLSVAGLLVLIALTQAFVPTSVSKIKSVRYVSGPKGRPLMMAGESGVLKVSGEELEKQLAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPRIASALKVYGLPTIFFIREGQLIHRVEGAMPASELTKLVNHYCFGAP--------EEEIKDV 173
BLAST of NO07G01650 vs. NCBI_GenBank
Match: CBJ32678.1 (thioredoxin-related protein [Ectocarpus siliculosus]) HSP 1 Score: 119.4 bits (298), Expect = 1.100e-23 Identity = 54/115 (46.96%), Postives = 78/115 (67.83%), Query Frame = 0 Query: 57 VTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASELTKMVNHYCFGAPLDGATAAADE 172 VTGEELE L E P++LDV+A WCGPC L E++K+ + K RVLK+DSDEE +A AL +YGLPT+ ++++G++ HR EG +PA E+ ++ + + FG P T AD+ Sbjct: 75 VTGEELEVELTEWELPMILDVFATWCGPCIQLKPEIEKLSQALEGKCRVLKLDSDEEEDMAGALNIYGLPTVIYMKDGKIQHRTEGFLPAEEMLQLADIHLFGKPPPEVTDPADD 189
BLAST of NO07G01650 vs. NCBI_GenBank
Match: XP_005770861.1 (hypothetical protein EMIHUDRAFT_61580, partial [Emiliania huxleyi CCMP1516] >EOD18432.1 hypothetical protein EMIHUDRAFT_61580, partial [Emiliania huxleyi CCMP1516]) HSP 1 Score: 110.9 bits (276), Expect = 4.000e-21 Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 0 Query: 12 VCLLLVAALAQAF--MPATLSGMQRVHRHSRPRGGPVMMAGDSGVLKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASELTKMVN 155 +C L++AA + T +G QR+ R + M V +VT EE E L + +P+LLDV+A WCGPCQ++A E+DKV Y D+ RVLK+D+D+E +A L+V GLPT+ I + +V R EGA+ A EL ++V+ Sbjct: 4 LCWLVLAACITPLHALALTAAGGQRLALRPSSRSPALAM---GAVRQVTTEEFEAELQDCATPILLDVFAVWCGPCQLMAPEMDKVAEHYGDRCRVLKIDADDEAEVADTLQVRGLPTVLLINDMSVVMRAEGALMADELKEIVD 145
BLAST of NO07G01650 vs. NCBI_GenBank
Match: OSX76447.1 (hypothetical protein BU14_0190s0004 [Porphyra umbilicalis]) HSP 1 Score: 109.4 bits (272), Expect = 1.200e-20 Identity = 52/111 (46.85%), Postives = 75/111 (67.57%), Query Frame = 0 Query: 52 SGVLKVTGEELEKALA-EVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASELTKMVNHYCFGAP 162 S V +V + LE AL + +P+L+D YA WCGPCQ L LD++ Y+ +LR+LKVD++ EP +ASAL + GLPT+ F+R+G L +RMEGA+ A EL +++ AP Sbjct: 97 SAVTQVDHDGLEAALKNDSTTPLLVDFYAPWCGPCQFLLPVLDELATRYEGRLRILKVDTESEPELASALAIRGLPTLCFVRDGALKYRMEGALAADELASIIDQILLDAP 207
BLAST of NO07G01650 vs. NCBI_GenBank
Match: GAX86360.1 (hypothetical protein CEUSTIGMA_g13772.t1 [Chlamydomonas eustigma]) HSP 1 Score: 101.7 bits (252), Expect = 2.400e-18 Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0 Query: 54 VLKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFI--REGQLVHRMEGAMPASELTKMV 154 V K+TGE+LEK +A+ +++D +A WCGPC +LA EL+KV DK++VLK+D DE P ++S LK+ GLPTI FI G+ R EG +PA ++ +V Sbjct: 42 VEKITGEQLEKEIADRDRTLIVDFFATWCGPCLLLANELEKVAESLGDKVKVLKIDVDENPELSSQLKIEGLPTIVFIPKESGKPALRTEGLLPAQQIMDIV 143
BLAST of NO07G01650 vs. NCBI_GenBank
Match: GAX77391.1 (hypothetical protein CEUSTIGMA_g4837.t1 [Chlamydomonas eustigma]) HSP 1 Score: 101.7 bits (252), Expect = 2.400e-18 Identity = 48/102 (47.06%), Postives = 69/102 (67.65%), Query Frame = 0 Query: 54 VLKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFI--REGQLVHRMEGAMPASELTKMV 154 V K+TGE+LEK +A+ +++D +A WCGPC +LA EL+KV DK++VLK+D DE P ++S LK+ GLPTI FI G+ R EG +PA ++ +V Sbjct: 42 VEKITGEQLEKEIADRDRTLIVDFFATWCGPCLLLASELEKVAESLGDKVKVLKIDVDENPELSSQLKIEGLPTIVFIPKESGKPALRTEGLLPAQQIMDIV 143
BLAST of NO07G01650 vs. NCBI_GenBank
Match: OGO11105.1 (thioredoxin [Chloroflexi bacterium RBG_16_47_49]) HSP 1 Score: 97.1 bits (240), Expect = 6.000e-17 Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 0 Query: 55 LKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASELTKMVNHY 157 + VT EKA+ + PV++D +A WCGPC+++A LDK+ + KL V KV++DE P AS +V G+PT+FF+ +G++VHR GA+P L ++V + Sbjct: 6 IHVTDSAFEKAVLQSKIPVIVDFWAPWCGPCRMVAPTLDKLAKEHAGKLLVAKVNTDENPEWASRYQVQGIPTMFFVADGKIVHRQVGALPEPMLREVVKEF 107
BLAST of NO07G01650 vs. NCBI_GenBank
Match: XP_005838337.1 (thioredoxin y [Guillardia theta CCMP2712] >EKX51357.1 thioredoxin y [Guillardia theta CCMP2712]) HSP 1 Score: 96.7 bits (239), Expect = 7.800e-17 Identity = 50/135 (37.04%), Postives = 81/135 (60.00%), Query Frame = 0 Query: 19 ALAQAFMPATLSGMQRVHRHSRPRGGPVMMAGDSGVLKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASELTKMV 154 AL P+T G R+ R + MAG V V E E + E P+++D YA+WCGPC+++A +L++V KD++R LK+++DE +A+ ++VY LPT+ I++G +V R EGAM A+++ +V Sbjct: 45 ALCAGLSPST--GRGRIQNQGNVR-TTLRMAG--AVEAVDAETFEVIIQEETKPLVVDFYAEWCGPCRLVAPQLEEVAQTMKDQVRFLKINTDENERLATLMQVYALPTLLLIKDGAVVQRAEGAMMANQIRDLV 174
BLAST of NO07G01650 vs. NCBI_GenBank
Match: WP_006517946.1 (thioredoxin [Leptolyngbya sp. PCC 7375] >EKV03585.1 thioredoxin [Leptolyngbya sp. PCC 7375]) HSP 1 Score: 96.3 bits (238), Expect = 1.000e-16 Identity = 42/87 (48.28%), Postives = 61/87 (70.11%), Query Frame = 0 Query: 63 EKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFIREGQLVHRMEGAMPASEL 150 E LA P L+D YA WCGPCQ++AGEL KVK +DKL+++K+D+D +AS +++ LPT+ ++GQ V R+EGAM A++L Sbjct: 11 EDMLAGSDKPTLVDFYANWCGPCQLMAGELKKVKDELQDKLQIVKIDTDRYDTLASKYQIHALPTMVLFKDGQEVDRIEGAMNATQL 97
BLAST of NO07G01650 vs. NCBI_GenBank
Match: ABR23155.1 (thioredoxin [Ulva fasciata]) HSP 1 Score: 96.3 bits (238), Expect = 1.000e-16 Identity = 52/121 (42.98%), Postives = 74/121 (61.16%), Query Frame = 0 Query: 35 VHRHSRPRGGPVMMAGDSGVLKVTGEELEKALAEVGSPVLLDVYAQWCGPCQILAGELDKVKGLYKDKLRVLKVDSDEEPAIASALKVYGLPTIFFI--REGQLVHRMEGAMPASELTKMV 154 V RH+ P A + KVTGEELE ALA P+++D YA WCGPC +LA EL++V D +++LKVD++ E A+AS L++ GLPT+ FI + R EG +PA+ + +V Sbjct: 16 VPRHAAPLQRRNCTAYAGEIRKVTGEELEVALANREKPMIVDFYADWCGPCVLLAKELEQVAQELGDSVQILKVDTEIEKALASQLRIQGLPTMIFIGMDPEKPALRTEGLLPANSIKDIV 136 The following BLAST results are available for this feature:
BLAST of NO07G01650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01650 ID=NO07G01650|Name=NO07G01650|organism=Nannochloropsis oceanica|type=gene|length=1514bpback to top protein sequence of NO07G01650.1 >NO07G01650.1-protein ID=NO07G01650.1-protein|Name=NO07G01650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=177bpback to top Synonyms
Publications
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