NO07G01580, NO07G01580 (gene) Nannochloropsis oceanica

Overview
NameNO07G01580
Unique NameNO07G01580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1814
Alignment locationchr7:478169..479982 -

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Properties
Property NameValue
DescriptionPleckstrin like protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:478169..479982 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
Homology
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: GAX96072.1 (Hypothetical protein PINS_003943 [Pythium insidiosum])

HSP 1 Score: 146.0 bits (367), Expect = 8.800e-32
Identity = 65/108 (60.19%), Postives = 88/108 (81.48%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQE 123
            D +N D+EG LTK+S WLK+WRRRYF+LKG+KL+F + +    HG+IDL+ C+TVKSAE K  KR   EV+TP++TF MYAD+EK+KD+WIGA+GRAIV+ S+++T E
Sbjct:  206 DLSNPDYEGELTKRSVWLKEWRRRYFVLKGNKLYFCRAQHEPAHGLIDLADCLTVKSAEDKTNKRFCFEVATPDSTFYMYADSEKQKDEWIGAIGRAIVKYSSSFTGE 313
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: GBG28401.1 (Pleckstrin-likey domain-containing protein 1 [Aurantiochytrium sp. FCC1311])

HSP 1 Score: 144.1 bits (362), Expect = 3.400e-31
Identity = 64/110 (58.18%), Postives = 84/110 (76.36%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVG 125
            D +  DF G LTK+S WLK WR+RYF+LKG++L+F++     PHG IDL  C+TVKSAE K  KR++ EV+TP+  + +YADTEKEKD+WIGA+GRAIVR S+ YT + G
Sbjct:   13 DLSEPDFSGDLTKRSKWLKQWRKRYFVLKGNRLYFSEGPGKVPHGEIDLKDCLTVKSAEDKTNKRHSFEVATPQEVYFLYADTEKEKDEWIGAIGRAIVRFSSAYTADDG 122
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: OWY97625.1 (hypothetical protein PHMEG_00031800 [Phytophthora megakarya])

HSP 1 Score: 143.7 bits (361), Expect = 4.400e-31
Identity = 67/117 (57.26%), Postives = 89/117 (76.07%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDD 132
            D +  DFEG LTK+S WLK+WR+RYF+LKG+KL+F K +    HG+IDL+ C+TVKSAE K  KR   EV+TP++TF MYA+ EK+KD+WIGA+GRAIV+ S+++T      GD DD
Sbjct:    9 DLSEPDFEGELTKRSVWLKEWRKRYFVLKGNKLYFCKAQGEPAHGLIDLADCLTVKSAEEKTNKRFCFEVATPDSTFYMYAENEKQKDEWIGAIGRAIVKFSSSFT------GDQDD 119
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_009538401.1 (hypothetical protein PHYSODRAFT_289146 [Phytophthora sojae] >EGZ06504.1 hypothetical protein PHYSODRAFT_289146 [Phytophthora sojae] >ETI44209.1 hypothetical protein F443_11066 [Phytophthora parasitica P1569] >ETK84226.1 hypothetical protein L915_10789 [Phytophthora parasitica] >ETL90811.1 hypothetical protein L917_10578 [Phytophthora parasitica] >ETM44105.1 hypothetical protein L914_10628 [Phytophthora parasitica] >ETO72860.1 hypothetical protein F444_11141 [Phytophthora parasitica P1976] >ETP42083.1 hypothetical protein F442_10968 [Phytophthora parasitica P10297] >KUF86056.1 Pleckstrin y domain-containing protein 1 [Phytophthora nicotianae])

HSP 1 Score: 142.5 bits (358), Expect = 9.800e-31
Identity = 66/119 (55.46%), Postives = 91/119 (76.47%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGS 134
            D ++ DFEG LTK+S WLK+WR+RYF+LKG+KL+F + +    HG+IDL+ C+TVKSAE K  KR   EV+TP++TF MYA+ EK+KD+WIGA+GRAIV+ S+++T     G  DDD +
Sbjct:    9 DLSDPDFEGELTKRSVWLKEWRKRYFVLKGNKLYFCRAQGEPAHGLIDLADCLTVKSAEEKTNKRFCFEVATPDSTFYMYAENEKQKDEWIGAIGRAIVKFSSSFT-----GDQDDDAN 122
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: ETL37658.1 (hypothetical protein L916_10679 [Phytophthora parasitica] >ETP14034.1 hypothetical protein F441_10979 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 142.1 bits (357), Expect = 1.300e-30
Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGS 134
            D ++ DFEG LTK+S WLK+WR+RYF+LKG+KL+F + +    HG+IDL  C+TVKSAE K  KR   EV+TP++TF MYA+ EK+KD+WIGA+GRAIV+ S+++T     G  DDD +
Sbjct:    9 DLSDPDFEGELTKRSVWLKEWRKRYFVLKGNKLYFCRAQGEPAHGLIDLEDCLTVKSAEEKTNKRFCFEVATPDSTFYMYAENEKQKDEWIGAIGRAIVKFSSSFT-----GDQDDDAN 122
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_008916297.1 (hypothetical protein PPTG_19631 [Phytophthora parasitica INRA-310] >ETM98398.1 hypothetical protein PPTG_19631 [Phytophthora parasitica INRA-310])

HSP 1 Score: 142.1 bits (357), Expect = 1.300e-30
Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGS 134
            D +  DFEG LTK+S WLK+WR+RYF+LKG+KL+F + +    HG+IDL+ C+TVKSAE K  KR   EV+TP++TF MYA+ EK+KD+WIGA+GRAIV+ S+++T     G  DDD +
Sbjct:    9 DLSGPDFEGELTKRSVWLKEWRKRYFVLKGNKLYFCRAQGEPAHGLIDLADCLTVKSAEEKTNKRFCFEVATPDSTFYMYAENEKQKDEWIGAIGRAIVKFSSSFT-----GDQDDDAN 122
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: XP_002899849.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY60903.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 142.1 bits (357), Expect = 1.300e-30
Identity = 66/119 (55.46%), Postives = 90/119 (75.63%), Query Frame = 0 
Query:   15 DTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGS 134
            D +  DFEG LTK+S WLK+WR+RYF+LKG+KL+F + +    HG+IDL+ C+TVKSAE K  KR   EV+TP++TF MYA+ EK+KD+WIGA+GRAIV+ S+++T     G  DDD +
Sbjct:    9 DLSEPDFEGELTKRSVWLKEWRKRYFVLKGNKLYFCRAQGEPAHGLIDLADCLTVKSAEEKTNKRFCFEVATPDSTFYMYAENEKQKDEWIGAIGRAIVKFSSSFT-----GDQDDDAN 122
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: OAO15760.1 (pleckstrin domain-containing protein [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 142.1 bits (357), Expect = 1.300e-30
Identity = 65/111 (58.56%), Postives = 85/111 (76.58%), Query Frame = 0 
Query:    6 IDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSS 117
            I PN     +  +  F G+LTK+S+WLKDWR+RYFILKG+KL+F K+    PHG+IDLS C T+KSA+    K+++LE+ T ++T+ MYADTEKEKDDWIGA+GRAIV SS
Sbjct:   26 IMPNELAGVNLKHPQFTGFLTKRSAWLKDWRKRYFILKGNKLYFCKSVDADPHGVIDLSKCQTIKSADDVTHKKHSLEIVTTDSTYYMYADTEKEKDDWIGAIGRAIVHSS 136
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: CCI43456.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 141.7 bits (356), Expect = 1.700e-30
Identity = 66/114 (57.89%), Postives = 88/114 (77.19%), Query Frame = 0 
Query:   18 NADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSSTTYTQEVGEGGDDDD 132
            N  FEG LTK+S W+K+WR+RYFILKG+KL+F+K++  +PHG IDL+ C+TVKSAE K  KR   EV+TP+TT+ MYA  E++KD+WIGA+GRAIV+ ST +T      GD D+
Sbjct:   17 NPAFEGELTKRSMWMKEWRKRYFILKGNKLYFSKSKNDAPHGFIDLADCLTVKSAEDKTNKRYCFEVATPDTTYYMYAQNEEQKDEWIGAIGRAIVQVSTCFT------GDQDE 124
[Close]
BLAST of NO07G01580 vs. NCBI_GenBank
Match: OAO14232.1 (hypothetical protein AV274_4071 [Blastocystis sp. ATCC 50177/Nand II] >OAO15127.1 hypothetical protein AV274_3163 [Blastocystis sp. ATCC 50177/Nand II])

HSP 1 Score: 141.7 bits (356), Expect = 1.700e-30
Identity = 64/109 (58.72%), Postives = 84/109 (77.06%), Query Frame = 0 
Query:    8 PNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRAIVRSS 117
            PN     +  +  F G+LTK+S+WLKDWR+RYFILKG+KL+F K+    PHG+IDLS C T+KSA+    K+++LE+ T ++T+ MYADTEKEKDDWIGA+GRAIV SS
Sbjct:    2 PNELAGVNLKHPQFTGFLTKRSAWLKDWRKRYFILKGNKLYFCKSVDADPHGVIDLSKCQTIKSADDVTHKKHSLEIVTTDSTYYMYADTEKEKDDWIGAIGRAIVHSS 110
The following BLAST results are available for this feature:
BLAST of NO07G01580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
GAX96072.18.800e-3260.19Hypothetical protein PINS_003943 [Pythium insidios... [more]
GBG28401.13.400e-3158.18Pleckstrin-likey domain-containing protein 1 [Aura... [more]
OWY97625.14.400e-3157.26hypothetical protein PHMEG_00031800 [Phytophthora ... [more]
XP_009538401.19.800e-3155.46hypothetical protein PHYSODRAFT_289146 [Phytophtho... [more]
ETL37658.11.300e-3055.46hypothetical protein L916_10679 [Phytophthora para... [more]
XP_008916297.11.300e-3055.46hypothetical protein PPTG_19631 [Phytophthora para... [more]
XP_002899849.11.300e-3055.46conserved hypothetical protein [Phytophthora infes... [more]
OAO15760.11.300e-3058.56pleckstrin domain-containing protein [Blastocystis... [more]
CCI43456.11.700e-3057.89unnamed protein product [Albugo candida][more]
OAO14232.11.700e-3058.72hypothetical protein AV274_4071 [Blastocystis sp. ... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01580.2NO07G01580.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide
NO07G01580.1NO07G01580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580510gene_2480Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g13gene3334Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01580.2NO07G01580.2Nannochloropsis oceanica (N. oceanica IMET1)mRNA
NO07G01580.1NO07G01580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01580 ID=NO07G01580|Name=NO07G01580|organism=Nannochloropsis oceanica|type=gene|length=1814bp
CGATGCTGCTTGCTTGTCTTGTGGGTGCGTGCGGGACGGGGGGGGAGCGT
TAGCATCAAGTACCAATACCAGACATCGTCCACGAACAAAAGCATCAAGG
CATATAGAACAAGAAGGATGTGTGTGACCAAGCAAAGCCTCAGCTAACCT
CAAAGCAGCACTAAAGCAAGGATGACCCTCGCTACGCGCAGAGCCTCCTC
TGAAATTTGCCAGCGACGACAAGAGGCCCCGCCGAGCGATATGGGCAAGC
CGTCTTGTTATTCATTGGCCGCTCCCCCACTCACATGCCTCCACACGCAT
ACCAAGCAGTCTCAACGCTCACTACCCTCCTTACTCCTATGTTTCTACAG
GCTCCGCTGGTTGTTTGGATTGCGTAGCTTTGACAGCCGCCGCGTCGTCT
TGCCACCCGTCATAGTCATCGCAGAGAGCGACAGGAACACTTGCGTCTCC
AAATCGAATAGCACTCTTAGTCATGAGGGGCACCTACATAGACCCCAATA
CAAACATCCGCTACGACACCAATAATGCGGACTTTGAAGgtacgtgggtg
tgctggccaagctgttttttttaaaagcaaatcaagggaagacggtgggg
ctgaatgccataaataggtcagaaaacccacctctctcaaagaacctagg
gttctgacccagcagaaacggcccagagagtatgcctatgatccgtagtc
ctgctctgtcttgtgctgtgtagaaactgggtctgctgtatgtggtggct
caggctctggttcctcattcttggtagcgttggagaggcctagaaaaaat
tagtctggcagaatcacagcccaagaagccagggatatcacgccacttcc
acgactcaggcataactggcatcaatataggattgattgctgcttggctc
cggtttcaggcttgcccccaaaatatggctcaacagcctgactaagaagt
gaaccaagttgccagtggttcctccgacgtttgggaccagtccctcgatg
aagattgtccataacgagctcttatgcgcacccgtttccatttacaacat
ataacagGGTGGTTGACAAAGCAGAGCAGCTGGCTGAAGGATTGGAGGAG
ACGATACTTCATCCTCAAGGGTAGCAAACTGTTCTTCGCCAAGgtgggag
gagggtggggcggtcgagctgcggagggtttaagtcgggtggagggatca
aaatgaataggggggggtggaatggagtgcttgtatcccaattagctttg
cacgtaacctcttggtgcggtcgattggttcttggtgtgggaatggccag
ggtgtgcaccgccacacggtccacttcccaccacctgttgaattatcagt
ctccaagagggtttcctccccccacagcacccgcacttaccatcatccac
tctctccgctccccactatcttaataaacagAACGAGGCGGGATCCCCCC
ACGGGATGATCGACCTTTCGTCGTGCATGACCGTCAAATCCGCGGAGCTC
AAAGCCCAAAAGCGAAACGCTCTAGAAGTCTCCACCCCTGAGACCACCTT
CTTAATGTACGCGGACACGGAGAAAGAAAAAGATGACTGGATCGGTGCAG
TCGGTCGTGCCATTGTGCGGAGCTCGACCACGTACACGCAGGAGGTGGGG
GAGGGGGGAGATGACGACGACGGGAGTGATAGTGAAGAGGACTAGGGCGG
GGTTGGAACGGAAGGCGGGATGTGTTTTTTGTATAGCTTACACAACAGCT
CTAGCCAATGAGGATGATAAGAAAGAGGAGACAGACAGAAAGAAAGGAAG
CCGATGAAATGTCA
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protein sequence of NO07G01580.2

>NO07G01580.2-protein ID=NO07G01580.2-protein|Name=NO07G01580.2|organism=Nannochloropsis oceanica|type=polypeptide|length=128bp
MRTRFHLQHITGWLTKQSSWLKDWRRRYFILKGSKLFFAKNEAGSPHGMI
DLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKEKDDWIGAVGRA
IVRSSTTYTQEVGEGGDDDDGSDSEED*
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protein sequence of NO07G01580.1

>NO07G01580.1-protein ID=NO07G01580.1-protein|Name=NO07G01580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=139bp
MRGTYIDPNTNIRYDTNNADFEGWLTKQSSWLKDWRRRYFILKGSKLFFA
KNEAGSPHGMIDLSSCMTVKSAELKAQKRNALEVSTPETTFLMYADTEKE
KDDWIGAVGRAIVRSSTTYTQEVGEGGDDDDGSDSEED*
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Synonyms
Publications