NO07G01520, NO07G01520 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01520 vs. NCBI_GenBank
Match: XP_024572889.1 (mitochondrial import inner membrane translocase subunit tim50 [Plasmopara halstedii] >CEG36520.1 mitochondrial import inner membrane translocase subunit tim50 [Plasmopara halstedii]) HSP 1 Score: 218.8 bits (556), Expect = 3.400e-53 Identity = 119/284 (41.90%), Postives = 172/284 (60.56%), Query Frame = 0 Query: 113 LIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWL---YDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVAD--DIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLS 392 ++ GS++ + F I D L ++ +G Y ++ + PF +PSR+KLLPDW IP +P D P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L +YYEIV+FS N+G + I LD + +H L +D+TR+ G H+KDL+ LNRDL++VVI+DDDP A++ QP+N I IKPF + +D+ D +L L FL AL E V D + G R G+ D + Y + + Q ++++ ++ +KG GG +R + + HP S Sbjct: 94 VLAGSISGSILWHFVLDDKMKNRITDTLGSTFLGDIYTYIAKKVEEAVKPFTDPSRQKLLPDW-PIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFS-QNYG-AEEIVQKLDPKQCALHILSRDATRYLNGAHVKDLANLNRDLKQVVILDDDPAAYQLQPENAIPIKPFTNGRDRDDHALKDLIPFLKALASERVPDFRQVIGEFRDDDGVVRD-LATKYAARVHQLEMQKEQKKKKGFGGFVRGRLSH----HPTS 369
BLAST of NO07G01520 vs. NCBI_GenBank
Match: Q5S7T7.1 (RecName: Full=Mitochondrial import inner membrane translocase subunit TIM50; AltName: Full=NIF domain protein 3; Flags: Precursor >AAV63943.1 putative nuclear LIM factor interactor-interacting protein hyphal form [Phytophthora infestans]) HSP 1 Score: 218.4 bits (555), Expect = 4.500e-53 Identity = 120/284 (42.25%), Postives = 170/284 (59.86%), Query Frame = 0 Query: 113 LIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWL---YDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVAD--DIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLS 392 L+ GS++ + F + + L A+ +G YA + + PF +PSR+KLLPDW IP +P D P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L +YYEIV+FS N+G + I LD + +H L +D+TR+ G H+KDLS LNRDLR+VVI+DDDP A++ QP+N I + PF + +D+ D L L FL AL E V D + G R G+ D + Y + + Q ++++ ++ +KG GG +R + + HP S Sbjct: 94 LLAGSISGSIVWNFVLDDGIKSRVKETLGATFLGDIYAIIAKKVEETVKPFTDPSRQKLLPDW-PIPQVPADTPTVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFS-QNYG-AEEIVQKLDPKQCALHILSRDATRYLNGAHVKDLSNLNRDLRQVVILDDDPAAYQLQPENAIPVTPFTNGRDRDDHELKDLIPFLKALASERVPDFRQVIGEFRDEDGVVRD-LATKYGARVHQLEMQKEQKKKKGFGGFVRGRLSH----HPAS 369
BLAST of NO07G01520 vs. NCBI_GenBank
Match: XP_002904008.1 (mitochondrial import inner membrane translocase subunit TIM50, putative [Phytophthora infestans T30-4] >XP_002998163.1 mitochondrial import inner membrane translocase subunit, putative [Phytophthora infestans T30-4] >EEY55063.1 mitochondrial import inner membrane translocase subunit TIM50, putative [Phytophthora infestans T30-4] >EEY70509.1 mitochondrial import inner membrane translocase subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 217.6 bits (553), Expect = 7.700e-53 Identity = 120/284 (42.25%), Postives = 170/284 (59.86%), Query Frame = 0 Query: 113 LIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWL---YDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVAD--DIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLS 392 L+ GS++ + F + + L A+ +G YA + + PF +PSR+KLLPDW IP +P D P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L +YYEIV+FS N+G + I LD + +H L +D+TR+ G H+KDLS LNRDLR+VVI+DDDP A++ QP+N I + PF + +D+ D L L FL AL E V D + G R G+ D + Y + + Q ++++ ++ +KG GG +R + + HP S Sbjct: 94 LLAGSISGSIVWNFVLDDGIKSRVKETLGATFLGDIYAIIAKKVEETVKPFTDPSRQKLLPDW-PIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFS-QNYG-AEEIVQKLDPKQCALHILSRDATRYLNGAHVKDLSNLNRDLRQVVILDDDPAAYQLQPENAIPVTPFTNGRDRDDHELKDLIPFLKALASERVPDFRQVIGEFRDEDGVVRD-LATKYGARVHQLEMQKEQKKKKGFGGFVRGRLSH----HPAS 369
BLAST of NO07G01520 vs. NCBI_GenBank
Match: XP_008914975.1 (mitochondrial import inner membrane translocase subunit TIM50 [Phytophthora parasitica INRA-310] >ETM99733.1 mitochondrial import inner membrane translocase subunit TIM50 [Phytophthora parasitica INRA-310]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 119/284 (41.90%), Postives = 168/284 (59.15%), Query Frame = 0 Query: 113 LIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPY---AWLYDSVFSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVAD--DIPGVLRQFQGLDADQIGDAYKSMLRQAQIKEMERHQKGLGGLLRSQKAFQSIGHPLS 392 L+ GS++ + + L A+ +G Y A + PF +PSR+KLLPDW IP +P D P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L +YYEIV+FS N+G + I LD + +H L +D+TR+ G H+KDLS LNRDL++VVI+DDDP A++ QP+N I +KPF + +D+ D L L FL AL E V D + G R G+ D + Y + + Q ++++ ++ +KG GG +R + + HP S Sbjct: 95 LLAGSISXXXXXXXXXDDSXXXXXXETLGATFLGDIYVVIAKKVEETVKPFTDPSRQKLLPDW-PIPQVPADTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQYYEIVIFS-QNYG-AEEIVQKLDPKQCALHVLSRDATRYLNGAHVKDLSNLNRDLKQVVILDDDPAAYQLQPENAIPVKPFTNGRDRDDHELKNLIPFLKALASERVPDFRQVIGEFRDEDGVVRD-LATKYGARVHQLEMQKEQQKKKGFGGFVRGRMSH----HPAS 370
BLAST of NO07G01520 vs. NCBI_GenBank
Match: CCI47201.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 116/274 (42.34%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSV---FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDA--DQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 +L LI GS++ + + + L +P+G Y + D + P +PSR KLLPDW IP +PP+ P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L ++YEIV+FS N+ + + I LD + ++H L +D+TR+ G +KDLSKLNRDL++VV++DDDP A++ QP+N + IKPF + +D+ D L L FL AL E V D VL +F+ D + Y + L Q + ++ + QKG GG +R Sbjct: 895 SLGLIVGSISGSIVWFYVLDDDVKTKVRHQLNQTPLGELYRYSADKIADWIRPITDPSRSKLLPDW-PIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFS-ENY-MAEEIVMKLDPKQCVLHVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRDDHELKDLIPFLKALASERV-KDFRQVLAEFRDEDGVLRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 1164
BLAST of NO07G01520 vs. NCBI_GenBank
Match: CCI47204.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 116/274 (42.34%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSV---FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDA--DQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 +L LI GS++ + + + L +P+G Y + D + P +PSR KLLPDW IP +PP+ P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L ++YEIV+FS N+ + + I LD + ++H L +D+TR+ G +KDLSKLNRDL++VV++DDDP A++ QP+N + IKPF + +D+ D L L FL AL E V D VL +F+ D + Y + L Q + ++ + QKG GG +R Sbjct: 908 SLGLIVGSISGSIVWFYVLDDDVKTKVRHQLNQTPLGELYRYSADKIADWIRPITDPSRSKLLPDW-PIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFS-ENY-MAEEIVMKLDPKQCVLHVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRDDHELKDLIPFLKALASERV-KDFRQVLAEFRDEDGVLRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 1177
BLAST of NO07G01520 vs. NCBI_GenBank
Match: CCI47205.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 116/274 (42.34%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSV---FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDA--DQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 +L LI GS++ + + + L +P+G Y + D + P +PSR KLLPDW IP +PP+ P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L ++YEIV+FS N+ + + I LD + ++H L +D+TR+ G +KDLSKLNRDL++VV++DDDP A++ QP+N + IKPF + +D+ D L L FL AL E V D VL +F+ D + Y + L Q + ++ + QKG GG +R Sbjct: 866 SLGLIVGSISGSIVWFYVLDDDVKTKVRHQLNQTPLGELYRYSADKIADWIRPITDPSRSKLLPDW-PIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFS-ENY-MAEEIVMKLDPKQCVLHVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRDDHELKDLIPFLKALASERV-KDFRQVLAEFRDEDGVLRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 1135
BLAST of NO07G01520 vs. NCBI_GenBank
Match: CCI47206.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 116/274 (42.34%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSV---FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDA--DQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 +L LI GS++ + + + L +P+G Y + D + P +PSR KLLPDW IP +PP+ P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L ++YEIV+FS N+ + + I LD + ++H L +D+TR+ G +KDLSKLNRDL++VV++DDDP A++ QP+N + IKPF + +D+ D L L FL AL E V D VL +F+ D + Y + L Q + ++ + QKG GG +R Sbjct: 889 SLGLIVGSISGSIVWFYVLDDDVKTKVRHQLNQTPLGELYRYSADKIADWIRPITDPSRSKLLPDW-PIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFS-ENY-MAEEIVMKLDPKQCVLHVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRDDHELKDLIPFLKALASERV-KDFRQVLAEFRDEDGVLRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 1158
BLAST of NO07G01520 vs. NCBI_GenBank
Match: CCI47207.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 116/274 (42.34%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSV---FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDA--DQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 +L LI GS++ + + + L +P+G Y + D + P +PSR KLLPDW IP +PP+ P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L ++YEIV+FS N+ + + I LD + ++H L +D+TR+ G +KDLSKLNRDL++VV++DDDP A++ QP+N + IKPF + +D+ D L L FL AL E V D VL +F+ D + Y + L Q + ++ + QKG GG +R Sbjct: 895 SLGLIVGSISGSIVWFYVLDDDVKTKVRHQLNQTPLGELYRYSADKIADWIRPITDPSRSKLLPDW-PIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFS-ENY-MAEEIVMKLDPKQCVLHVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRDDHELKDLIPFLKALASERV-KDFRQVLAEFRDEDGVLRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 1164
BLAST of NO07G01520 vs. NCBI_GenBank
Match: CCI47208.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 214.2 bits (544), Expect = 8.500e-52 Identity = 116/274 (42.34%), Postives = 165/274 (60.22%), Query Frame = 0 Query: 110 ALKLIGGSVAAGGAYLFYQTSTTDQSIDDVLRASPVGFPYAWLYDSV---FSPFINPSREKLLPDWHSIPNIPPDAPCPPTLVLDLEDTLVHATWDPKFGWRYAKRPGVDRFLQDLSKYYEIVLFSPSNFGVVDPITWTLDKQGLIMHRLYKDSTRFYQGKHIKDLSKLNRDLRKVVIIDDDPDAFRFQPQNGIRIKPFKDPKDKADSSLDKLRAFLLALVMEGVADDIPGVLRQFQGLDA--DQIGDAYKSMLRQAQIKEMERHQKGLGGLLR 379 +L LI GS++ + + + L +P+G Y + D + P +PSR KLLPDW IP +PP+ P P LVLDLEDTLVH+ W K GWR+AKRPGVD FL+ L ++YEIV+FS N+ + + I LD + ++H L +D+TR+ G +KDLSKLNRDL++VV++DDDP A++ QP+N + IKPF + +D+ D L L FL AL E V D VL +F+ D + Y + L Q + ++ + QKG GG +R Sbjct: 908 SLGLIVGSISGSIVWFYVLDDDVKTKVRHQLNQTPLGELYRYSADKIADWIRPITDPSRSKLLPDW-PIPQVPPNTPPVPVLVLDLEDTLVHSEWSRKHGWRHAKRPGVDEFLETLCQFYEIVIFS-ENY-MAEEIVMKLDPKQCVLHVLSRDATRYLNGSRVKDLSKLNRDLKQVVLLDDDPAAYQLQPENAVPIKPFANARDRDDHELKDLIPFLKALASERV-KDFRQVLAEFRDEDGVLRDLPSKYGARLYQLEKEKEQAKQKGFGGFIR 1177 The following BLAST results are available for this feature:
BLAST of NO07G01520 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01520 ID=NO07G01520|Name=NO07G01520|organism=Nannochloropsis oceanica|type=gene|length=1959bpback to top protein sequence of NO07G01520.1 >NO07G01520.1-protein ID=NO07G01520.1-protein|Name=NO07G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=445bpback to top Synonyms
Publications
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