NO07G01480, NO07G01480 (gene) Nannochloropsis oceanica

Overview
NameNO07G01480
Unique NameNO07G01480
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1620
Alignment locationchr7:454100..455719 -

Link to JBrowse

Properties
Property NameValue
DescriptionGalactose-proton symporter
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:454100..455719 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: INTERPRO
TermDefinition
IPR036259MFS_trans_sf
IPR020846MFS_dom
IPR005828Sub_transporter
IPR003663Sugar/inositol_transpt
Homology
BLAST of NO07G01480 vs. NCBI_GenBank
Match: XP_008610467.1 (hypothetical protein SDRG_06466 [Saprolegnia diclina VS20] >EQC36361.1 hypothetical protein SDRG_06466 [Saprolegnia diclina VS20])

HSP 1 Score: 292.0 bits (746), Expect = 3.900e-75
Identity = 191/472 (40.47%), Postives = 276/472 (58.47%), Query Frame = 0
Query:   13 SAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAIT-SLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKE-LGSTMKQPT-AGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLYFCFAGMCVLCLLFLYGMVPETKHEAKDGLEE 482
            SA+ I LSS L+GY  + LN  I         GSIL D DLS  E +LA+++ ++GA I  L  +   D +GRRK LL NNV F+ G +  A   +   I +GR ++GL  G+ + V P+LL+EIA  ++RG IT+LHQL +T+GIL S+++GYG V +++ GWRYV  FV +PA LQ++L   VPESPRWLL   + EEAR  L  LR             A  ++ EL  L  + L      PT   +   +++   M IG  ++FF AMTGINTVI YS+ IF  AGV+   + T  VG +NV  T++S +LVD  GRK+LL   + +M +SL +L   LL   +      I+AV  +L++V GFA+G+GAV WVV+ E+ P+ IR++A  +F+  ++  N+ ++  TL +I  LG             ++ G+A LY    G+ VLC LF+   VPETK  + DG ++
Sbjct:   32 SAYLIALSSFLWGYGFSVLNVCIA----ENAAGSILVDFDLSDAEIELASSLVLIGAWISALLTASMADAYGRRKLLLANNVLFVGGAIACACAKTKGDIYIGRTIIGLACGIVTNVTPILLAEIAPAESRGQITTLHQLMLTIGILGSSVLGYGLVSSVASGWRYVNAFVAVPALLQVMLMPWVPESPRWLLANGKDEEARTQLVRLR---------DVVHATDIDVELKQLRHDMLADKRASPTDISFCGLWAFKRPMLIGSFLVFFQAMTGINTVILYSSKIFHFAGVDQPIMATASVGTINVLTTVLSVFLVDYCGRKILLLVSSALMALSLGVLSYTLL--YLSDKLQGILAVICVLVFVAGFAVGLGAVIWVVLAEITPSVIRTRAMGVFMAISYACNVFVATCTLGIIKALGHG-------HKDVEKNGIAKLYLICGGLSVLCFLFIAKFVPETKGLSHDGYDK 481          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: XP_009529819.1 (hypothetical protein PHYSODRAFT_507179 [Phytophthora sojae] >EGZ16070.1 hypothetical protein PHYSODRAFT_507179 [Phytophthora sojae])

HSP 1 Score: 290.8 bits (743), Expect = 8.600e-75
Identity = 173/466 (37.12%), Postives = 277/466 (59.44%), Query Frame = 0
Query:    9 RLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAI-TSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTMKQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLYFCFAGMCVLCLLFLYGMVPETKH 474
            +L  +A+ I +SS ++G+S A LN  I     P   GS+L D++L+ EE++ ATA+ ++G ++  L         G++K++L NNV +I+GG + A+ TS   +  GR L+GL +G+ +   P+LL+EI+   +RG ITSLHQL++T+G+L+S ++G+  + N+  GWRY+  F++LP  +Q +    V ESP WL++   REE R  L  LR     D         A+E E+  + + +     +P   W    ++   M  G +++FF AMTGINTV+ YST IF  AGV N F  T +VG  NV +T++S   VD  GR+ LL  GT +M+++L +L   LL  +        VAV S+L++V GFA+G+GAV WV++G++ P  IRS+A++ ++  ++  N++I++ TLS I  LG    P        ++ G+A LY   +G+ V+CL ++Y  + ET H
Sbjct:   59 QLRLAAWLISISSFMWGFSAAVLNVCIV----PDAIGSLLVDINLTTEEQERATALVVVGCVLSALTTGGVGARVGQKKTILGNNVLYIIGGAVCALATSKRELYAGRLLIGLASGIVTNTVPILLTEISPAVSRGEITSLHQLSLTIGMLVSAVLGFFIISNVPSGWRYLNGFMILPPLVQCLSMSFVSESPWWLMKNRGREECRATLMFLRPVNQKD---------AIETEVQEIARVMEHRQHEPHVTWPHLLAHKKVMVTGTVLIFFQAMTGINTVMLYSTKIFHFAGVTNPFFATAVVGFTNVGVTIISVRFVDSYGRRPLLIVGTTVMIVALGVLSWSLLYLSDNLAVQGTVAVISVLMFVGGFAVGLGAVVWVMLGDITPVHIRSRAFAFYMAVSYLCNIVIAVYTLSAISFLGRGSNP--------EKNGIAKLYLILSGVAVVCLAYVYTFIEETSH 503          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: XP_012208676.1 (hypothetical protein SPRG_12978 [Saprolegnia parasitica CBS 223.65] >KDO20621.1 hypothetical protein SPRG_12978 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 290.4 bits (742), Expect = 1.100e-74
Identity = 191/471 (40.55%), Postives = 274/471 (58.17%), Query Frame = 0
Query:    5 SVSPRLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAIT-SLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKE-LGSTMKQPTA-GWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLYFCFAGMCVLCLLFLYGMVPETK 473
            + S  L  SA+ I LSS L+GY  + LN  I         GSIL D DLS  E +LA+++ ++GA +  L  +   D +GRRK LL NN+ F+ G +  A   +   I +GR ++GL  G+ + V P+LL+EIA  ++RG IT+LHQL +T+GIL S+++GYG V ++  GWRYV  FV +PA LQ++L   VPESPRWLL   + EEAR  L  LR             A  ++ EL  L  + L      PT+  +   + Y   M IG  ++FF AMTGINTVI YS+ IF  AGV+   + T  VG +NV  T++S +LVD  GRK+LL   + +M +SL +L   LL   +      I+AV  +L++V GFA+G+GAV WVV+GE+ P+ IR++A  +F+  ++  N+ ++  TL +I  LG             ++ G+A LY    G+ VLC LF+   VPETK
Sbjct:   24 ATSGALKLSAYFIALSSFLWGYGFSVLNVCIA----ENAAGSILVDFDLSDAEIELASSLVLIGAWVSALLTASMADAYGRRKLLLANNLLFVGGAIACACAKTKGDIYIGRTIIGLACGIVTNVTPILLAEIAPAESRGQITTLHQLMLTIGILGSSVLGYGLVSSVPSGWRYVNAFVAVPALLQVMLMPWVPESPRWLLANGKDEEARTQLVRLR---------HVVFATDIDVELKQLRHDILADKRTSPTSVSFCGLWVYKRPMLIGSFLVFFQAMTGINTVILYSSKIFHFAGVDEPIMATASVGTINVITTVISVFLVDYCGRKILLLVSSALMALSLGVLSYTLL--YLSDKLQGILAVICVLVFVAGFAVGLGAVIWVVLGEITPSAIRTRAMGVFMAISYACNVFVATCTLGIIKALGHG-------HKDVEKNGIAKLYLICGGLSVLCFLFIAKFVPETK 472          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: XP_009843283.1 (hypothetical protein H257_16529 [Aphanomyces astaci] >ETV67295.1 hypothetical protein H257_16529 [Aphanomyces astaci])

HSP 1 Score: 288.9 bits (738), Expect = 3.300e-74
Identity = 190/470 (40.43%), Postives = 274/470 (58.30%), Query Frame = 0
Query:    7 SPRLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAI-TSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTM--KQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLYFCFAGMCVLCLLFLYGMVPETKH 474
            S  L  +A+ I  SS L+GY    LN  I        KGSIL D +L+  E +LA+++ ++GA    +  +   D +GRR  LLVNNV FIVG +L A+ TS D+I +GR ++G   G+ + V P+LL+EIA    RG IT+LHQL +T+GIL S+++GY  V ++  GWRYV  FV +PA LQ +L   +PESPRWLL  +R ++A+  L  LR                ++ E+  ++ +L ST    Q  A     + Y   M +G L++FF AMTGINTV+ YS+ IF  AGV+N+ + T  VG +NV  T+VS  LVD  GRK+LL   + +M  SL +L   LL   +      ++AV  +L++V GFAIG+GAV WVV+GE+ P+ IRS+A   F+  ++  N+ ++  TL +I  LG              + G+A LY    G+ V C LF++G VPETK+
Sbjct:   25 SAYLRIAAYVIAFSSFLWGYGFTVLNVCIA----ENAKGSILLDFNLTDAEIELASSLVLIGAWFTAVATASLADTYGRRIVLLVNNVLFIVGALLCALATSKDTIYIGRTIIGFACGIVTNVTPILLAEIAPANIRGQITTLHQLMLTIGILGSSVLGYALVTSVPSGWRYVNAFVAVPAILQCMLTPWIPESPRWLLSRNRTDDAKIQLRSLR---------HIVYETELDDEMREIQLDLSSTQDHDQKKATVVSLWRYKKPMLLGTLLVFFQAMTGINTVMLYSSKIFHFAGVDNSIMATASVGTINVLATVVSVVLVDTCGRKILLLLSSGLMAASLGVLSYSLL--TLTGKIQGVLAVVCVLVFVAGFAIGLGAVIWVVLGELTPSSIRSRAMGFFMAVSYACNVFVATCTLGIIQALGTG--------PDVTKNGIAKLYLICCGLAVACFLFIWGYVPETKN 471          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: XP_012211182.1 (hypothetical protein SPRG_16506 [Saprolegnia parasitica CBS 223.65] >KDO18111.1 hypothetical protein SPRG_16506 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 288.1 bits (736), Expect = 5.600e-74
Identity = 190/471 (40.34%), Postives = 272/471 (57.75%), Query Frame = 0
Query:    5 SVSPRLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAIT-SLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKE-LGSTMKQPT-AGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLYFCFAGMCVLCLLFLYGMVPETK 473
            + S  L  SA+ I LSS L+GY  + LN  I         GSIL D DLS  E +LA+++ ++GA +  L  +   D +GRRK LL NN+ F+ G +  A   +   I +GR ++GL  G+ + V P+LL+EIA  ++RG IT+LHQL +T+GIL S+++GYG V ++  GWRYV  FV +PA LQ++L   VPESPRWLL   + EEAR  L  LR                ++ EL  L  + L      PT   +   + Y   M IG  ++FF AMTGINTVI YS+ IF  AGV+   + T  VG +NV  T++S +LVD  GRK+LL   + +M +SL +L   LL   +      I+AV  +L++V GFA+G+GAV WVV+GE+ P+ IR++A  +F+  ++  N+ ++  TL +I  LG             ++ G+A LY    G+ VLC LF+   VPETK
Sbjct:   24 ATSGALKLSAYFIALSSFLWGYGFSVLNVCIA----ENAAGSILVDFDLSDAEIELASSLVLIGAWVSALLTASMADAYGRRKLLLANNLLFVGGAIACACAKTKGDIYIGRTIIGLACGIVTNVTPILLAEIAPAESRGQITTLHQLMLTIGILGSSVLGYGLVSSVPSGWRYVNAFVAVPALLQVMLMPWVPESPRWLLANGKDEEARTQLVRLR---------HVVYVTDIDVELKQLRHDILADKRASPTDVSFCHLWIYKRPMLIGSFLVFFQAMTGINTVILYSSKIFHFAGVDEPIMATASVGTINVITTVLSVFLVDYCGRKILLLVSSALMALSLGVLSYTLL--YLSDKLQGILAVICVLVFVAGFAVGLGAVIWVVLGEITPSVIRTRAMGVFMAISYACNVFVATCTLGIIKALGHG-------HKDVEKNGIAKLYLICGGLSVLCFLFIAKFVPETK 472          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: ETM47608.1 (hypothetical protein L914_07690 [Phytophthora parasitica])

HSP 1 Score: 286.6 bits (732), Expect = 1.600e-73
Identity = 170/443 (38.37%), Postives = 270/443 (60.95%), Query Frame = 0
Query:    9 RLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAI-TSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTMKQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLY 451
            RL  +A+ + +SS ++G+S A LN  I     P   GSIL D++LS EE++ ATA+ ++G ++  L         G++K++L+NNV +I+GG + A+ TS   +  GR L+GL +GV +   P+LL+EI+   +RG ITSLHQL++T+G+L+++++G+ F+ N+  GWRY+  F++LP  +Q +   LVPESP WL++   R+++R  L  LR +   D         A+E E+  + + +     +P   W    ++   M  G +++FF AMTGINTV+ YS  IF  AGV N F  T +VG  NV +T++S   VD  GR+ LL  GT IM+++L +L   LL  N        VAV S+L++V GFA+G+GAV WV++G++ P  IRS+A++ ++  ++  N+LI++ TLS I+ LG    P        ++ G+A LY
Sbjct:   59 RLLLAAWLVSISSFMWGFSAAVLNVCIV----PDAVGSILVDINLSTEEQERATALVVVGCVLSALTTGGIGARVGQKKTILINNVLYIIGGAICALATSKRELYAGRLLIGLASGVVTNTVPILLTEISPAISRGEITSLHQLSLTIGMLVTDVLGFFFISNVPSGWRYLNGFMILPPLIQCLCASLVPESPWWLMKNRGRDQSRATLVFLRPKNQKD---------AIETEVQEIARVMEHRQHEPHVTWSHLLAHKKVMVTGTILVFFQAMTGINTVMLYSAKIFHFAGVTNPFFATAVVGFTNVGVTIISVRFVDSYGRRPLLIVGTTIMILALGVLSWSLLYLNQNLSVQGTVAVISVLMFVGGFAVGLGAVVWVMLGDITPVHIRSRAFAFYMVVSYICNILIAVYTLSAINFLGRGSNP--------EKNGIAKLY 480          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: ETL94384.1 (hypothetical protein L917_07612 [Phytophthora parasitica] >ETO76589.1 hypothetical protein F444_08014 [Phytophthora parasitica P1976] >ETP45699.1 hypothetical protein F442_07907 [Phytophthora parasitica P10297])

HSP 1 Score: 286.2 bits (731), Expect = 2.100e-73
Identity = 170/443 (38.37%), Postives = 270/443 (60.95%), Query Frame = 0
Query:    9 RLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAI-TSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTMKQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLY 451
            RL  +A+ + +SS ++G+S A LN  I     P   GSIL D++LS EE++ ATA+ ++G ++  L         G++K++L+NNV +I+GG + A+ TS   +  GR L+GL +GV +   P+LL+EI+   +RG ITSLHQL++T+G+L+++++G+ F+ N+  GWRY+  F++LP  +Q +   LVPESP WL++   R+++R  L  LR +   D         A+E E+  + + +     +P   W    ++   M  G +++FF AMTGINTV+ YS  IF  AGV N F  T +VG  NV +T++S   VD  GR+ LL  GT IM+++L +L   LL  N        VAV S+L++V GFA+G+GAV WV++G++ P  IRS+A++ ++  ++  N+LI++ TLS I+ LG    P        ++ G+A LY
Sbjct:   59 RLRLAAWLVSISSFMWGFSAAVLNVCIV----PDAVGSILVDINLSTEEQERATALVVVGCVLSALTTGGIGARVGQKKTILINNVLYIIGGAICALATSKRELYAGRLLIGLASGVVTNTVPILLTEISPAISRGEITSLHQLSLTIGMLVTDVLGFFFISNVPSGWRYLNGFMILPPLIQCLCASLVPESPWWLMKNRGRDQSRATLVFLRPKNQKD---------AIETEVQEIARVMEHRQHEPHVTWSHLLAHKKVMVTGTILVFFQAMTGINTVMLYSAKIFHFAGVTNPFFATAVVGFTNVGVTIISVRFVDSYGRRPLLIVGTTIMILALGVLSWSLLYLNQNLSVQGTVAVISVLMFVGGFAVGLGAVVWVMLGDITPVHIRSRAFAFYMVVSYICNILIAVYTLSAINFLGRGSNP--------EKNGIAKLY 480          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: XP_008904703.1 (hypothetical protein PPTG_10938 [Phytophthora parasitica INRA-310] >ETI47881.1 hypothetical protein F443_07969 [Phytophthora parasitica P1569] >ETN10266.1 hypothetical protein PPTG_10938 [Phytophthora parasitica INRA-310])

HSP 1 Score: 285.4 bits (729), Expect = 3.600e-73
Identity = 170/443 (38.37%), Postives = 269/443 (60.72%), Query Frame = 0
Query:    9 RLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAI-TSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTMKQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLY 451
            RL  +A+ + +SS ++G+S A LN  I     P   GSIL D++LS EE++ ATA+ ++G ++  L         G++K++L+NNV +I+GG + A+ TS   +  GR L+GL +GV +   P+LL+EI+   +RG ITSLHQL++T+G+L++ ++G+ F+ N+  GWRY+  F++LP  +Q +   LVPESP WL++   R+++R  L  LR +   D         A+E E+  + + +     +P   W    ++   M  G +++FF AMTGINTV+ YS  IF  AGV N F  T +VG  NV +T++S   VD  GR+ LL  GT IM+++L +L   LL  N        VAV S+L++V GFA+G+GAV WV++G++ P  IRS+A++ ++  ++  N+LI++ TLS I+ LG    P        ++ G+A LY
Sbjct:   59 RLRLAAWLVSISSFMWGFSAAVLNVCIV----PDAVGSILVDINLSTEEQERATALVVVGCVLSALTTGGIGARVGQKKTILINNVLYIIGGAICALATSKRELYAGRLLIGLASGVVTNTVPILLTEISPAISRGEITSLHQLSLTIGMLVTAVLGFFFISNVPSGWRYLNGFMILPPLIQCLCASLVPESPWWLMKNRGRDQSRATLVFLRPKNQKD---------AIETEVQEIARVMEHRQHEPHVTWSHLLAHKKVMVTGTILVFFQAMTGINTVMLYSAKIFHFAGVTNPFFATAVVGFTNVGVTIISVRFVDSYGRRPLLIVGTTIMILALGVLSWSLLYLNQNLAVQGTVAVISVLMFVGGFAVGLGAVVWVMLGDITPVHIRSRAFAFYMVVSYICNILIAVYTLSAINFLGRGSNP--------EKNGIAKLY 480          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: ETK87801.1 (hypothetical protein L915_07797 [Phytophthora parasitica] >ETL41221.1 hypothetical protein L916_07727 [Phytophthora parasitica])

HSP 1 Score: 285.0 bits (728), Expect = 4.700e-73
Identity = 169/443 (38.15%), Postives = 270/443 (60.95%), Query Frame = 0
Query:    9 RLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAI-TSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTMKQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLY 451
            RL  +A+ + +SS ++G+S A LN  I     P   GSIL D++LS EE++ ATA+ ++G ++  L         G+++++L+NNV +I+GG + A+ TS   +  GR L+GL +GV +   P+LL+EI+   +RG ITSLHQL++T+G+L+++++G+ F+ N+  GWRY+  F++LP  +Q +   LVPESP WL++   R+++R  L  LR +   D         A+E E+  + + +     +P   W    ++   M  G +++FF AMTGINTV+ YS  IF  AGV N F  T +VG  NV +T++S   VD  GR+ LL  GT IM+++L +L   LL  N        VAV S+L++V GFA+G+GAV WV++G++ P  IRS+A++ ++  ++  N+LI++ TLS I+ LG    P        ++ G+A LY
Sbjct:   59 RLRLAAWLVSISSFMWGFSAAVLNVCIV----PDAVGSILVDINLSTEEQERATALVVVGCVLSALTTGGIGARVGQKRTILINNVLYIIGGAICALATSKRELYAGRLLIGLASGVVTNTVPILLTEISPAISRGEITSLHQLSLTIGMLVTDVLGFFFISNVPSGWRYLNGFMILPPLIQCLCASLVPESPWWLMKNRGRDQSRATLVFLRPKNQKD---------AIETEVQEIARVMEHRQHEPHVTWSHLLAHKKVMVTGTILVFFQAMTGINTVMLYSAKIFHFAGVTNPFFATAVVGFTNVGVTIISVRFVDSYGRRPLLIVGTTIMILALGVLSWSLLYLNQNLSVQGTVAVISVLMFVGGFAVGLGAVVWVMLGDITPVHIRSRAFAFYMVVSYICNILIAVYTLSAINFLGRGSNP--------EKNGIAKLY 480          
BLAST of NO07G01480 vs. NCBI_GenBank
Match: OQS03534.1 (Major Facilitator Superfamily (MFS) [Thraustotheca clavata])

HSP 1 Score: 282.0 bits (720), Expect = 4.000e-72
Identity = 183/463 (39.52%), Postives = 270/463 (58.32%), Query Frame = 0
Query:   13 SAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTDLDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGGVLTAIT-SLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQLNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESPRWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGSTMKQ--PTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGVENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGGILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSKAYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLYFCFAGMCVLCLLFLYGMVPETK 473
            +A+ I LSS L+GY  + LN  I         GSIL D +LS  E +LA+++ ++GA +  L  +   D +GRR  LL+NNV FI G ++ A+  +   I +GR L+GL  G+ + V P+LL EIA +++RG IT+LHQL +T+GIL S+++GYG V ++  GWRYV  FV +PA LQ +L   +PESPRWLL    +++AR  L  LR         +A     ++ EL ++  ++ +  K       +   + Y   M IG L++FF AMTGINTVI YS+ IF  AGV+   + T  VG +NV  T++S +LVD  GRK+LL   T  M  SL LL   LL   +      I+AV  +L++V GFA+G+GAV WVV+GE+ P+ IR++A  +F+  ++  N+ ++  TL +I  LG             ++ G+A LY     + V C +F+   VPETK
Sbjct:   26 AAYLIALSSFLWGYGFSVLNVCIA----EGATGSILVDFELSDAEIELASSLVLIGAWVSALLTASMADTYGRRNMLLINNVLFIAGALVCALAKTKGDIYIGRTLIGLACGIVTNVTPILLGEIAPSESRGQITTLHQLMLTIGILGSSILGYGLVSSVPAGWRYVNAFVGVPAVLQCMLMSWIPESPRWLLVNGAQDKARTQLFRLR---------KAVYETEIDLELKSILHDINNDKKNEPKDISFCGLWVYKRPMIIGSLLVFFQAMTGINTVILYSSKIFHFAGVDQPIMATASVGTINVITTVISVFLVDYCGRKILLLVSTAAMAFSLGLLSYSLL--YLDDKLQGILAVICVLVFVAGFAVGLGAVIWVVLGEITPSTIRTRAMGVFMAISYACNVFVATCTLGIIKALGSG-------HKDVEKNGIAKLYLICGVLSVACFIFIAKWVPETK 466          
The following BLAST results are available for this feature:
BLAST of NO07G01480 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_008610467.13.900e-7540.47hypothetical protein SDRG_06466 [Saprolegnia dicli... [more]
XP_009529819.18.600e-7537.12hypothetical protein PHYSODRAFT_507179 [Phytophtho... [more]
XP_012208676.11.100e-7440.55hypothetical protein SPRG_12978 [Saprolegnia paras... [more]
XP_009843283.13.300e-7440.43hypothetical protein H257_16529 [Aphanomyces astac... [more]
XP_012211182.15.600e-7440.34hypothetical protein SPRG_16506 [Saprolegnia paras... [more]
ETM47608.11.600e-7338.37hypothetical protein L914_07690 [Phytophthora para... [more]
ETL94384.12.100e-7338.37hypothetical protein L917_07612 [Phytophthora para... [more]
XP_008904703.13.600e-7338.37hypothetical protein PPTG_10938 [Phytophthora para... [more]
ETK87801.14.700e-7338.15hypothetical protein L915_07797 [Phytophthora para... [more]
OQS03534.14.000e-7239.52Major Facilitator Superfamily (MFS) [Thraustotheca... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000724NSK000724Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01480.1NO07G01480.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580485gene_2470Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100010g2gene3323Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01480.1NO07G01480.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01480 ID=NO07G01480|Name=NO07G01480|organism=Nannochloropsis oceanica|type=gene|length=1620bp
ATGACACTTGCGTCCGTATCCCCACGCTTGTGGGCAAGCGCATTTACTAT
TGGACTGTCCTCGCTCCTTTTTGGGTATAGCCTTGCGTGCCTCAACACGG
TCATCACATGCCCATCCAAGCCCTGCCCCAAGGGCTCAATCCTCACCGAC
CTCGACCTCAGCCTCGAGGAGGAACAGCTGGCCACGGCCATGACAATCCT
TGGAGCTATGATCGGGGGGCTCTTTGCCTCCTATCCCAATGACCACTGGG
GTCGCCGCAAGTCCTTGCTCGTCAACAATGTATTTTTCATCGTCGGCGGT
GTGCTCACCGCCATCACCAGTTTAGACTCCATCCTCGTCGGCCGGTTCTT
GCTCGGGCTCGGTACGGGTGTCGAATCCATGGTAGCCCCTGTGTTGCTTT
CAGAGATTGCATCCAACCAGACCCGTGGGGCAATTACCAGCTTGCATCAA
TTGAATATCACCTTGGGAATTTTGATTTCAAACTTGATCGGCTACGGCTT
TGTCCCAAACATCTCAGGGGGATGGAGATATGTCCAGCTCTTCGTTGTTC
TACCTGCTGGGTTGCAACTTATCTTGTTTTGGCTCGTACCTGAGTCGCCT
CGGTGGTTGCTGCGTGCTGACCGCCGAGAGGAGGCACGAGACGTCCTGAG
CCATTTGCGAATCCGCAAGACGGGTGATGCCGCTGCGCAGGCCGCGGGGG
CCGCGGCGGTTGAGGCAGAGCTGGTGGCGTTGGAGAAAGAGCTTGGTTCA
ACAATGAAGCAGCCGACTGCGGGTTGGAAGGAAACCTTTAGCTACGGGAC
TGCCATGAGGATTGGTATGTTGATGATGTTCTTTAGTGCAATGACAGGGA
TTAACACTGTCATTTTCTATTCGACCACGATCTTTGCGTTGGCGGGGGTC
GAGAATGCTTTCCTTGGTACAGTTTTGGTCGGTGTGCTGAATGTTTTTAT
CACTATGGTCTCCGGATATTTGGTTGATAAGGCGGGAAGGAAGGTGCTAT
TGACCGGAGGGACGTGGATCATGCTTATTAGTTTGTTGTTGCTGGGTGGG
ATTTTGTTGGCGGAGAATGTGCCTGCGCTCGCGATCTCGATCGTTGCTGT
CGGGTCGATGCTGCTGTATGTCTTTGGTTTTGCAATTGGGATTGGGGCAG
TGCAGTGGGTGGTGGTGGGTGAGGTTGTACCGACCAAGATCCGGTCGAAG
GCATATTCCATTTTTGTGACGAGCAATTGGACGGCTAATCTCCTTATTTC
TCTTGTGACCTTGTCATTGATTGATACGCTGGGGGAGGCGGTCGCCCCTG
CGGGGGCTTTGAAAGCGAAGCAGCAACAGATGGGGGTGGCGTTGTTGTAT
TTCTGTTTCGCTGGGATGTGTGTGTTGTGCTTACTGTTTTTGTACGGGAT
GGTGCCCGAGACGAAGCATGAGGCGAAGGACGGGCTGGAGGAGCACCATC
ACCATGCATGTTCTGAGTTTGCGGCGGGCGATGCCGATATGATGACGGAG
GTGGTGCATTGTTCGGAGGGGCATGGTTTAGGCGATAGTCAAAATACGGC
GGGTAGGGAGGAGGGAGGGCTAGGGGAAGGAGGGAAGGTTGCTGTGACGC
AGCCCGTATCGATGGTTTAG
back to top

protein sequence of NO07G01480.1

>NO07G01480.1-protein ID=NO07G01480.1-protein|Name=NO07G01480.1|organism=Nannochloropsis oceanica|type=polypeptide|length=540bp
MTLASVSPRLWASAFTIGLSSLLFGYSLACLNTVITCPSKPCPKGSILTD
LDLSLEEEQLATAMTILGAMIGGLFASYPNDHWGRRKSLLVNNVFFIVGG
VLTAITSLDSILVGRFLLGLGTGVESMVAPVLLSEIASNQTRGAITSLHQ
LNITLGILISNLIGYGFVPNISGGWRYVQLFVVLPAGLQLILFWLVPESP
RWLLRADRREEARDVLSHLRIRKTGDAAAQAAGAAAVEAELVALEKELGS
TMKQPTAGWKETFSYGTAMRIGMLMMFFSAMTGINTVIFYSTTIFALAGV
ENAFLGTVLVGVLNVFITMVSGYLVDKAGRKVLLTGGTWIMLISLLLLGG
ILLAENVPALAISIVAVGSMLLYVFGFAIGIGAVQWVVVGEVVPTKIRSK
AYSIFVTSNWTANLLISLVTLSLIDTLGEAVAPAGALKAKQQQMGVALLY
FCFAGMCVLCLLFLYGMVPETKHEAKDGLEEHHHHACSEFAAGDADMMTE
VVHCSEGHGLGDSQNTAGREEGGLGEGGKVAVTQPVSMV*
back to top
Synonyms
Publications