NO07G01470, NO07G01470 (gene) Nannochloropsis oceanica

Overview
NameNO07G01470
Unique NameNO07G01470
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1284
Alignment locationchr7:451817..453100 +

Link to JBrowse

Properties
Property NameValue
DescriptionTetratricopeptide-like helical
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:451817..453100 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom
Homology
BLAST of NO07G01470 vs. NCBI_GenBank
Match: EWM27271.1 (Tetratricopeptide-like helical [Nannochloropsis gaditana])

HSP 1 Score: 637.5 bits (1643), Expect = 3.000e-179
Identity = 303/405 (74.81%), Postives = 337/405 (83.21%), Query Frame = 0
Query:   23 SSRLTGVAKALLAEDWARVDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMFPMDRVPAEGLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMPVRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            SSR T VAKALLAEDWARVD RVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKIL+LWEQPQ LARCGL+HSAYSNSYVNLAIFKAGVDR LVQ+DCG EAEELIYKFCVVDRQKIIVDT+FPM+RVPAEGL V HIHTG+ VHLSS++LGQLLVMTMADVADQQYGWQDDLFGDAQWRP      A+++ ++ET     E                                   VMHP+TLWPG+SKPGLWMYFVS+LA LARTCPMPVRPPV ++G+FLLDRTAERQARDLYWEV+SEDPRDK K+D +I++LT AL LNP+LAEPHTLLAQC+L+ GDFP AL AA+K++DL L+WGTNWDKRVSFEAWMAWTRVL QHAE++TPWH N+WGVINLGLVR
Sbjct:   20 SSRFTEVAKALLAEDWARVDTRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILSLWEQPQTLARCGLYHSAYSNSYVNLAIFKAGVDRDLVQKDCGKEAEELIYKFCVVDRQKIIVDTLFPMERVPAEGLVVPHIHTGDSVHLSSKVLGQLLVMTMADVADQQYGWQDDLFGDAQWRP----CQASNEDHEETKKSDSE-----------------------------------VMHPFTLWPGISKPGLWMYFVSKLATLARTCPMPVRPPVFNEGQFLLDRTAERQARDLYWEVMSEDPRDKGKIDKSISRLTQALALNPFLAEPHTLLAQCHLVNGDFPRALLAAEKSIDLMLEWGTNWDKRVSFEAWMAWTRVLRQHAEDKTPWHSNAWGVINLGLVR 385          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_002179949.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC48935.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 303.1 bits (775), Expect = 1.300e-78
Identity = 167/426 (39.20%), Postives = 231/426 (54.23%), Query Frame = 0
Query:   18 LTLDSSSRLTGVAKALLAEDWARVDKRV-PHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMFPMDRVPAEGLTVQHIH-TGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMPVR--------------PPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            L    + R   + + +LA+D+  +D  V    ++ L  RGAH+CWHKH TF +HLL V  IL LW Q + + R GLFHSAYSNSYVNLA+F   ++RG+++   G +AE L++ FC++DRQ+++V+T+     +P +GLTV H+  + + V L+SE L  L+V TMAD+ADQ +GWQD LFG                +  +TT                                              LWPG+SKPGLWM ++SQLA +ART     +              PPV   G   L  + E  ARD YW V+S +  D ++    I  L   + +NP+  EP  +LAQ +L  G+F +AL    +A+DL  QWGT WDKR+SF AW+AWTRVL+Q A +R  W  NSW + NLGLVR
Sbjct:   16 LDFGGAERERNLVEQILADDYEGLDPIVLRQSISALRSRGAHRCWHKHSTFLEHLLSVHNILRLWGQGRTIGRVGLFHSAYSNSYVNLALFDPAIERGMMKTLIGEDAEVLVHLFCIIDRQQVVVNTLLAQGFIPKQGLTVPHLRDSSKSVFLNSETLRMLVVFTMADIADQYFGWQDTLFGGGGQEGSMIIPGKDDVARHDTT---------------------------------------------ALWPGVSKPGLWMSYLSQLAEVARTFVPSTQDVNRSADEDRTADFPPVFANGTQSLSVSDEVAARDFYWSVVSGEVTDNAEA---IEVLQLCVKMNPWAFEPLVILAQKHLHTGNFDSALNTTYRALDLQHQWGTAWDKRLSFGAWVAWTRVLMQRARDRQSWPTNSWDINNLGLVR 393          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: GAX19989.1 (hypothetical protein FisN_1Lh537 [Fistulifera solaris])

HSP 1 Score: 303.1 bits (775), Expect = 1.300e-78
Identity = 175/420 (41.67%), Postives = 225/420 (53.57%), Query Frame = 0
Query:   19 TLDSSSRLTGVAKALLAEDWARVDKRV-PHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMFPMDRVPAEGLTVQHIHTGE-PVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAAL----------ARTCPMPVRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLV 427
            T+ +SSR     + +LAED+ ++D  V    +  L +RGAH+CWHKH TF +HL+GV  +L LW Q Q +AR GLFHSAYSNSYVNLA+F    +R ++    G EAEEL++ FC++DRQK++V+T+     +P EGL+V H+   +  V LS+E L  L+V TMAD+ADQ +GWQD LFG       +A S       +E                                                LWPG+SKPGLWM +VS LA +          AR   +P  PPV   G   L    E +ARDLYW V+S      +     I +L      NP+  EP  LLAQ  L + D   A  AA +A+ L   WGT WDKR+SF AW+AWTRVLLQ A  R PW  NSW V NLGLV
Sbjct:   50 TITNSSR-NATFELILAEDYDQLDGPVLATSIGALKQRGAHRCWHKHSTFLEHLVGVHNVLRLWGQGQKIARVGLFHSAYSNSYVNLALFDPWTERDVMTRLIGPEAEELVHLFCIIDRQKVVVNTVLKQGFIPLEGLSVPHLREADKEVFLSAETLRLLVVFTMADIADQYFGWQDQLFGGG----GEAGSMIIPGQDREDRHDTA-----------------------------------------ALWPGVSKPGLWMSYVSDLAQVVKRFHDEMGSARDEALPAIPPVFANGTSTLLLQDEEKARDLYWSVVSSSGEPDNDPKNTIQQLQECHERNPWAFEPLVLLAQKLLHQNDHERAQAAATQALQLQQDWGTAWDKRLSFGAWVAWTRVLLQRASERDPWPTNSWEVNNLGLV 423          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: GAX14337.1 (hypothetical protein FisN_1Hh537 [Fistulifera solaris])

HSP 1 Score: 299.7 bits (766), Expect = 1.500e-77
Identity = 169/406 (41.63%), Postives = 216/406 (53.20%), Query Frame = 0
Query:   33 LLAEDWARVDKRVPHLLAR-LTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMFPMDRVPAEGLTVQHIHTGE-PVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAAL----------ARTCPMPVRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLV 427
            +LAED+  +D  V     R L +RGAH+CWHKH TF +HL+GV  IL LW Q + +AR GLFHSAYSNSYVNLA+F    +R ++    G EAEEL++ FC++DRQ ++V+T+     +P EGL+V H+   +  V+LS+E L  L+V TMAD+ADQ +GWQD LFG               +   +T                                               LWPG+SKPGLWM +VS LA +          AR   +P  PPV   G   L    E +ARDLYW V+S      +     I +L      NP+  EP  LLAQ  L + D+  A  AA +A+ L   WGT WDKR+SF AW+AWTRVLLQ A  R PW  NSW V NLGLV
Sbjct:  114 ILAEDYDELDGPVLTTSIRALKQRGAHRCWHKHSTFLEHLVGVHDILRLWGQGKKIARVGLFHSAYSNSYVNLALFDPSTERDVMTRLIGSEAEELVHLFCIIDRQNVVVNTVLKQGFIPLEGLSVPHLREADKEVYLSAETLRLLVVFTMADIADQYFGWQDQLFGGGGEDGSMIIPGQDREGRHDTA---------------------------------------------ALWPGVSKPGLWMSYVSDLAQVVKRYHDDMVSARDEVLPAIPPVFANGTSKLSLQDEEKARDLYWSVVSSSGEPDNDPKNIILQLQECHERNPWAFEPLVLLAQKLLHQNDYERAQAAASQALQLQQDWGTAWDKRLSFGAWVAWTRVLLQRASERDPWPTNSWEVNNLGLV 474          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_004336092.1 (tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff] >ELR14079.1 tetratricopeptide repeat domain containing protein [Acanthamoeba castellanii str. Neff])

HSP 1 Score: 280.8 bits (717), Expect = 7.100e-72
Identity = 160/414 (38.65%), Postives = 224/414 (54.11%), Query Frame = 0
Query:   30 AKALLAEDWARVDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMFPM---DRVPAEGLTVQHI-HTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTC------PMPVRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDK-------RVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLV 427
            A+ALL E+    D ++P LL +L + GA +CWHKHGTFKQHL GVW+IL LW+Q QA+ RCGL+HSAYSNSYVNLAIFK    R  V+   G EAEELI+ FC + RQ++I D + P+     +P EG+ V+HI +  E + +S +++   L++T+AD  DQ YGWQD LF +                     +G +  + +N                                 P TLWP   KPGLWM  +SQ+A L+R          P+ PP+ +    +L+  +ER+ARDLYW V+      +   +     L  A+ LNP++AEP  LLAQ Y + G +  A + A +A+ L  +WGT WDK         ++  W+AW R+ +  A  R  W   S+G+INLGLV
Sbjct:   21 ARALLREELHHCDPKLPALLEQLGKHGASECWHKHGTFKQHLFGVWRILYLWKQSQAVCRCGLYHSAYSNSYVNLAIFKPDTGRETVRSAVGNEAEELIHFFCTIPRQELIFDHILPLHPDKPIPKEGVEVRHIRNKDEKIRVSPKLMKISLLLTIADFCDQWYGWQDLLFAN---------------------EGGLTMSGDN---------------------------------PATLWPSTGKPGLWMSRLSQMAVLSRRIHEQEPDDEPL-PPIFNNCSTVLEPDSEREARDLYWRVVMHKTEQEQHEEA-AEDLRKAIALNPFVAEPRVLLAQIYNVSGRYEEAESQAQEALRLLFEWGTAWDKVPPWLSLLPAWFGWIAWARINVLKA-RRKEWPSTSFGIINLGLV 377          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_006848662.1 (uncharacterized protein LOC18438415 [Amborella trichopoda] >ERN10243.1 hypothetical protein AMTR_s00171p00069250 [Amborella trichopoda])

HSP 1 Score: 274.2 bits (700), Expect = 6.600e-70
Identity = 155/435 (35.63%), Postives = 219/435 (50.34%), Query Frame = 0
Query:   41 VDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTM------------FPMDRVPAE------------GLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMP------------------------VRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            +D  +P L+A L   GA +CWHKHG F  HL+ +++IL+LW+ P  LA CGLFHSAYSNSYVNLAIF     R  VQ   G +AE+L++ FCVV RQ +I D +            F  + VP              G+TV+HI TG+ + +   ++   L+MT+AD +DQ +G+QD+LF                    E ++G +E + NN                                   TLWPG  KPGLW+  +S++A L R                             V PPV +    +L    ER+ARDLYWEV+      K  ++     L   +  NP++ EPH LLAQ Y+++G +       ++ + L L+WG+NWDKRVS+E W+AW RVL+  A+ R+ W + SWG++NLGLVR
Sbjct:   26 IDPDLPRLIAVLRSSGASECWHKHGDFLHHLVSIFRILSLWKSPHPLALCGLFHSAYSNSYVNLAIFPPETSRPYVQSLIGPQAEDLVHMFCVVPRQSLIHDDLLFHFSDTELESAFMREEVPESLRDKIQRLVPPYGVTVKHIRTGQDLVVPRRLVASFLLMTIADFSDQLFGFQDELF--------------------ENSNGRLEFSGNNIT---------------------------------TLWPGDGKPGLWVNSLSRMAVLYRLLVREEERRESENGFANGGSKRGYEEIELVVPPVFENCTMVLSCQDEREARDLYWEVVCGGGGGKIGLERQRELLVRCIEKNPFVGEPHVLLAQIYVMQGRYEEGEREGERGLKLMLEWGSNWDKRVSWEGWVAWNRVLIMKAKERS-WPQTSWGILNLGLVR 406          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_004249930.1 (PREDICTED: uncharacterized protein LOC101256540 [Solanum lycopersicum])

HSP 1 Score: 269.6 bits (688), Expect = 1.600e-68
Identity = 161/460 (35.00%), Postives = 223/460 (48.48%), Query Frame = 0
Query:   31 KALLAEDWARVDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVD-----------------TMFPMDR--------------------VPAEGLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMP--------------------------VRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            +  L  ++  +DK +P L+A L   GA +CWHKHG+F  HL+ ++KIL +WE P ++  CGLFHSAYSNSYVNLAIF     R  V+   G  AE LI+ FC+V RQ +I D                 +M  +                      +P +G+ V+HI TGE V +S  ++   L+MTMAD +DQ + +QD LF                    E ++G +E T NN                                   TLWPG  KPGLWM   S++ A+                                 V PPV D    +LD   ++ AR+LYWE + +    K  +D    KL  ++  NP++ EPH +L Q YL KG+F  A   A+K + L L+WG+ WDKR+S+E W+AWTRVLL  A+ +T W +NSWG++NLGLVR
Sbjct:   21 RPFLRGEFESIDKDLPSLIAVLRSVGAGECWHKHGSFLDHLIDIYKILKIWEAPNSVCLCGLFHSAYSNSYVNLAIFDPSTGRETVRRHVGEAAERLIHLFCIVPRQSLIHDDLLFRYADSELVEHLELSMASLSNAKEKGLFNENEAWRKKLGSILPVDGVIVKHIKTGEDVLVSRRLVAVFLLMTMADFSDQLFNFQDLLF--------------------ENSNGRLEFTGNNSQT--------------------------------TLWPGDGKPGLWMNSASRMGAIYTLILRXXXXXXXXXXXXXXRVVVSGRDEEIELVIPPVFDNCTRVLDAEEQKMARELYWEGVCQG--SKRGLDWAKEKLVMSIDKNPFVGEPHVVLGQIYLSKGEFEEAEKEAEKGLRLILEWGSPWDKRMSWEGWVAWTRVLLMKAKEKT-WPQNSWGILNLGLVR 425          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_006350934.1 (PREDICTED: uncharacterized protein LOC102596661 [Solanum tuberosum])

HSP 1 Score: 269.2 bits (687), Expect = 2.100e-68
Identity = 163/461 (35.36%), Postives = 225/461 (48.81%), Query Frame = 0
Query:   31 KALLAEDWARVDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTM--------------FPMDR-----------------------VPAEGLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMP---------------------------VRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            +  L  ++  +DK +P+L+A L   GA +CWHKHG+F  HL+ ++KIL +W+ P ++  CGLFHSAYSNSYVNLAIF     R  V+   G  AE LI+ FC+V RQ +I D +              F M                         +P +G+ V+HI TGE V +S  ++   L+MTMAD +DQ + +QD LF                    E ++G +E T NN                                   TLWPG  KPGLWM  VS++ A+                                  V PPV D    +LD   ++ AR+LYWE + E    K  +D    KL  ++  NP++ EPH +L Q YL KG F  A   A+K + L L+WG+ WDKR+S+E W+AWTRVLL  A+N++ W +NSWG++NLGLVR
Sbjct:   24 RPFLRGEFESIDKDLPNLIAVLRSVGAGECWHKHGSFLDHLIDIYKILKIWKAPNSVCLCGLFHSAYSNSYVNLAIFDPSTGRETVRGHVGEAAERLIHLFCIVPRQPLIHDDLLFRYTDSELVEHLEFSMASLSNAKEKGLFNENEAWRKKLVLILPVDGVIVKHIKTGEDVLVSRRLVAVFLLMTMADFSDQLFNFQDLLF--------------------ENSNGRLEFTGNNSQT--------------------------------TLWPGDGKPGLWMNSVSRMGAIYTLILRXXXXXXXXXXXXXXXXXXXXGRDEEIDLVIPPVFDFCTRVLDAEEQKMARELYWEGVCEG--SKRGLDWAKEKLLMSIDKNPFVGEPHVVLGQIYLSKGKFEEAEKEAEKGLRLILEWGSPWDKRMSWEGWVAWTRVLLMKAKNKS-WPQNSWGILNLGLVR 429          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_018485423.1 (PREDICTED: uncharacterized protein LOC108856181 [Raphanus sativus])

HSP 1 Score: 268.9 bits (686), Expect = 2.800e-68
Identity = 163/471 (34.61%), Postives = 228/471 (48.41%), Query Frame = 0
Query:   22 SSSRLTGVAKALLAEDWARVDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMF----------PMDR---------------------------VPAEGLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMP----------------------------VRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            SSS +  +A+  L  +  +++ ++P L+A L   GA +CWHKHG+F  HL+ V+KIL LW+ P+++  CGLFHSAYSNSYVNLAIF A   R +V+   G EAE LI+ FCV+ RQ +I D +            +D                            VP  G+ V+HI TGE V +S  ++G  L+MTMAD +DQ +G+QD+LF +                     DG +E   NN                                    LWPG  KPGLWM   S++ A+                                   V PPV   G  +L+   + +ARD+YWE +S D   +  +D     L   +  NPY+ EPH LL+Q YL K  F  A   A++ + L LQWG+ WDKR+S+E W+AW RVLL  + +++ W + SWG++NLGLVR
Sbjct:    4 SSSSVLELARPFLRGELEKINPKLPSLIAVLKSVGAGECWHKHGSFLHHLIDVYKILKLWKAPESVCLCGLFHSAYSNSYVNLAIFDASTGRDVVRGHVGEEAESLIHLFCVIPRQTLIHDELLFKYSDLELVEHLDSSEVSLRNAKEEGVFDGEEAWRKKLNGLVPENGVVVKHIKTGEGVLVSRRVVGVFLLMTMADFSDQFFGFQDELFSN--------------------NDGRLEFRGNNVT---------------------------------ALWPGDGKPGLWMNSSSRMGAIYSLIVREEEILMEQRRRGSGAEFVVRKERDEDIELVVPPVFRFGTKVLEAKEQIEARDMYWEAVSSDASQEGYLDRAEEMLLGCIEKNPYVGEPHVLLSQVYLGKKRFVEAEREAERGLLLLLQWGSPWDKRMSWEGWIAWVRVLLMKSHDQS-WPDVSWGILNLGLVR 420          
BLAST of NO07G01470 vs. NCBI_GenBank
Match: XP_015058949.1 (PREDICTED: uncharacterized protein LOC107005010 [Solanum pennellii])

HSP 1 Score: 268.1 bits (684), Expect = 4.800e-68
Identity = 161/460 (35.00%), Postives = 223/460 (48.48%), Query Frame = 0
Query:   31 KALLAEDWARVDKRVPHLLARLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNSYVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTM--------------FPM-----------------------DRVPAEGLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQWRPRDAFSSATSKSYKETTDGVVESTSNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMP--------------------------VRPPVLDQGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLAEPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWTRVLLQHAENRTPWHENSWGVINLGLVR 428
            +  L  ++  +DK +P+L+A L   GA +CWHKHG+F  HL+ ++KIL +W+ P ++  CGLFHSAYSNSYVNLAIF     R  V+   G  AE LI+ FC+V RQ +I D +              F M                         +P +G+ V+HI TGE V +S  ++   L+MTMAD +DQ + +QD LF                    E ++G +E T NN                                   TLWPG  KPGLWM   S++ A+                                 V PPV D    +LD   ++ A +LYWE + E    K  +D    KL  ++  NP++ EPH +L Q YL KG+F  A   A+K + L L+WG+ WDKR+S+E W+AWTRVLL  A+ +T W +NSWG++NLGLVR
Sbjct:   21 RPFLRGEFESIDKDLPNLIAVLRSVGAGECWHKHGSFLDHLIDIYKILKIWKAPNSVCLCGLFHSAYSNSYVNLAIFDPSTGRETVRRHVGEAAERLIHLFCIVPRQSLIHDDLLFRYTDSELVEHLEFSMASLSNAKEKGLFNENEAWRKKLGSILPVDGVIVKHIKTGEDVLVSRRLVAVFLLMTMADFSDQLFNFQDLLF--------------------ENSNGRLEFTGNNSQT--------------------------------TLWPGDGKPGLWMNSASRMGAIYTLILREEEIIIEQRKRNGERVVVSGRDEEIELVIPPVFDNCTRVLDAEEQKMAIELYWEGVCEG--SKRGLDWAKEKLVMSIDKNPFVGEPHVVLGQIYLSKGEFEEAEKEAEKGLRLILEWGSPWDKRMSWEGWVAWTRVLLMKAKEKT-WPQNSWGILNLGLVR 425          
The following BLAST results are available for this feature:
BLAST of NO07G01470 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27271.13.000e-17974.81Tetratricopeptide-like helical [Nannochloropsis ga... [more]
XP_002179949.11.300e-7839.20predicted protein [Phaeodactylum tricornutum CCAP ... [more]
GAX19989.11.300e-7841.67hypothetical protein FisN_1Lh537 [Fistulifera sola... [more]
GAX14337.11.500e-7741.63hypothetical protein FisN_1Hh537 [Fistulifera sola... [more]
XP_004336092.17.100e-7238.65tetratricopeptide repeat domain containing protein... [more]
XP_006848662.16.600e-7035.63uncharacterized protein LOC18438415 [Amborella tri... [more]
XP_004249930.11.600e-6835.00PREDICTED: uncharacterized protein LOC101256540 [S... [more]
XP_006350934.12.100e-6835.36PREDICTED: uncharacterized protein LOC102596661 [S... [more]
XP_018485423.12.800e-6834.61PREDICTED: uncharacterized protein LOC108856181 [R... [more]
XP_015058949.14.800e-6835.00PREDICTED: uncharacterized protein LOC107005010 [S... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000725NSK000725Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01470.1NO07G01470.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580483gene_2469Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100038g47gene3322Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01470.1NO07G01470.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01470 ID=NO07G01470|Name=NO07G01470|organism=Nannochloropsis oceanica|type=gene|length=1284bp
ATGGCCGCTGTCACGACCGCAGCCGCTGCAGCAGCAACTGCAGCAGCTCG
GCTTACTTTGGACTCCTCGTCGCGCCTCACTGGGGTGGCCAAGGCATTGC
TGGCGGAAGACTGGGCGCGGGTCGATAAGCGGGTGCCCCATCTCCTGGCC
CGGCTCACGGAACGTGGCGCCCACCAATGCTGGCATAAGCACGGGACATT
TAAGCAGCACTTGCTGGGCGTCTGGAAGATCTTGGCGCTATGGGAGCAGC
CTCAAGCGTTGGCACGCTGTGGCCTTTTTCATTCTGCCTATTCCAACTCT
TACGTCAACCTGGCCATCTTCAAAGCCGGCGTTGATAGGGGCTTGGTGCA
AGAGGATTGCGGGGTCGAAGCCGAGGAGCTCATATACAAGTTCTGCGTGG
TAGACCGGCAGAAAATAATCGTTGATACCATGTTTCCCATGGATCGGGTA
CCCGCTGAAGGGTTAACAGTGCAACACATTCATACGGGGGAGCCTGTGCA
TTTGTCGAGCGAGATGCTAGGGCAGTTATTGGTTATGACCATGGCAGACG
TGGCCGACCAGCAATACGGGTGGCAAGACGACTTGTTTGGTGATGCACAG
TGGCGGCCTCGTGATGCCTTCAGCAGCGCGACCAGTAAGAGCTACAAGGA
GACCACAGATGGTGTGGTAGAAAGCACTAGCAACAATAGCTACAACAAAA
GCGGCAGTAACAACAGCAACGACAACAATAACAACAACAAGAACAAGATT
AATAGCAACGCAGAGGAGCAAGAAGCTGTCATGCATCCCTACACTCTCTG
GCCTGGTCTCTCGAAGCCCGGTTTATGGATGTACTTCGTCAGCCAGCTCG
CTGCCCTGGCCCGCACGTGTCCCATGCCTGTCCGTCCCCCCGTCTTGGAC
CAGGGACGGTTCCTCCTCGATCGTACCGCGGAACGTCAAGCGCGTGATTT
GTATTGGGAAGTGATTTCGGAAGACCCGCGGGATAAGAGTAAAGTGGACT
GTAACATCGCCAAGCTGACACATGCCCTAGTCCTCAATCCTTATCTAGCC
GAGCCGCACACCTTGCTAGCGCAATGCTATTTGATCAAGGGCGATTTCCC
AGCAGCCTTGACAGCAGCTGATAAGGCAGTTGACTTGTTTCTGCAATGGG
GTACGAATTGGGATAAGCGCGTGTCTTTTGAGGCTTGGATGGCTTGGACT
CGAGTCTTGCTTCAGCATGCAGAGAATCGTACGCCGTGGCATGAAAACTC
GTGGGGGGTGATTAATTTGGGCTTGGTACGGTGA
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protein sequence of NO07G01470.1

>NO07G01470.1-protein ID=NO07G01470.1-protein|Name=NO07G01470.1|organism=Nannochloropsis oceanica|type=polypeptide|length=428bp
MAAVTTAAAAAATAAARLTLDSSSRLTGVAKALLAEDWARVDKRVPHLLA
RLTERGAHQCWHKHGTFKQHLLGVWKILALWEQPQALARCGLFHSAYSNS
YVNLAIFKAGVDRGLVQEDCGVEAEELIYKFCVVDRQKIIVDTMFPMDRV
PAEGLTVQHIHTGEPVHLSSEMLGQLLVMTMADVADQQYGWQDDLFGDAQ
WRPRDAFSSATSKSYKETTDGVVESTSNNSYNKSGSNNSNDNNNNNKNKI
NSNAEEQEAVMHPYTLWPGLSKPGLWMYFVSQLAALARTCPMPVRPPVLD
QGRFLLDRTAERQARDLYWEVISEDPRDKSKVDCNIAKLTHALVLNPYLA
EPHTLLAQCYLIKGDFPAALTAADKAVDLFLQWGTNWDKRVSFEAWMAWT
RVLLQHAENRTPWHENSWGVINLGLVR*
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Synonyms
Publications