NO07G01410, NO07G01410 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01410 vs. NCBI_GenBank
Match: EWM27240.1 (mitochondrial protein [Nannochloropsis gaditana]) HSP 1 Score: 262.3 bits (669), Expect = 1.200e-66 Identity = 136/192 (70.83%), Postives = 157/192 (81.77%), Query Frame = 0 Query: 6 PRALLLTAKAARRS---LASATPTAVTLIRALSSASHTNPPPSPDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTYETVKDRTGMI 195 P A LL + AARRS L +A TA R LSS++H+ PPPSP+LTP Q+RRIGERTK+QL+DHL+LKT+VP SLDP+AP GPVD + IRRKRLLYRSKQRGWLEVDLLLGSWAAENV +L+ E DEYEK+LN ETIDIFN++NGA+ PP L+GSKIL RLQEYA SSPFG AS RTYE VKDRTG+I Sbjct: 4 PCAGLLFSSAARRSIYGLRNAVVTAFFDTRTLSSSAHSKPPPSPELTPAQVRRIGERTKAQLDDHLRLKTQVPESSLDPTAPPGPVDTDLIRRKRLLYRSKQRGWLEVDLLLGSWAAENVMSLSGPELDEYEKILNMETIDIFNLVNGALAPPPALKGSKILSRLQEYANSSPFGNASTRTYEAVKDRTGLI 195
BLAST of NO07G01410 vs. NCBI_GenBank
Match: CBJ33347.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 139.4 bits (350), Expect = 1.200e-29 Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 0 Query: 47 DLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSA-PAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTYETVKDRTGM 194 +LTP+++ R+G RT+ +DH+ L TE P SL P A V + +RRKRL+YRSKQRGWLEVDLLLG+WA NV L+ A+ D YE +LN ET+DIFN I G PP ++ + +L RLQ Y S+P G++ A +Y + K + + Sbjct: 63 ELTPEEVLRVGARTQEMWKDHVALTTEFPDASLPPGGHEASSVSPDAVRRKRLVYRSKQRGWLEVDLLLGTWAERNVAGLSAADMDSYEDILNLETVDIFNFITGNADPPAFVD-APMLARLQAYVKSNPLGQSPA-SYASAKRESNL 208
BLAST of NO07G01410 vs. NCBI_GenBank
Match: XP_012204520.1 (hypothetical protein SPRG_20818 [Saprolegnia parasitica CBS 223.65] >KDO24781.1 hypothetical protein SPRG_20818 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 131.3 bits (329), Expect = 3.200e-27 Identity = 83/183 (45.36%), Postives = 109/183 (59.56%), Query Frame = 0 Query: 4 MQPRALLLTAKAARRSLASATPTAVTLIRALSSASHTNPPPSPDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIING--AMPPPVELEGSKILKRLQEYAMSSPFGKASARTY 185 M RA +L A+AA R A A T S+ H N PP +T Q R R + +DH +K E P D S +DA+ RKR++YRSKQRGWLEVDLLLG WA+ENV +LT E +YE +LN+ETIDIFN I+G A+PP ++ + ++KRLQ Y +SP GKAS + + Sbjct: 1 MLARASILYARAAPRMAARAFSTE-------HSSFHANLPPL-SITEAQELRAQVRNEQMRKDHFAIKAEYP----DASQGEEAIDADKANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTADELRQYEDILNRETIDIFNFISGKDAVPPEID---TPMMKRLQAYCKTSPLGKASIQGF 168
BLAST of NO07G01410 vs. NCBI_GenBank
Match: XP_012211933.1 (hypothetical protein SPRG_17211 [Saprolegnia parasitica CBS 223.65] >KDO17362.1 hypothetical protein SPRG_17211 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 130.6 bits (327), Expect = 5.400e-27 Identity = 82/181 (45.30%), Postives = 107/181 (59.12%), Query Frame = 0 Query: 4 MQPRALLLTAKAARRSLASATPTAVTLIRALSSASHTNPPPSPDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTY 185 M RA +L A+AA R A A T S+ H N PP +T Q R R + +DH +K E P D S +DA+ RKR++YRSKQRGWLEVDLLLG WA+ENV +LT E +YE +LN+ETIDIFN I+G P E++ + ++KRLQ Y +SP GKAS + + Sbjct: 1 MLARASILYARAAPRMAARAFSTE-------HSSFHANLPPL-SITEAQELRAQVRNEQMRKDHFAMKAEYP----DASQGEEAIDADKANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTADELRQYEDILNRETIDIFNFISGKDVVPPEID-TPMMKRLQAYCKTSPLGKASIQGF 168
BLAST of NO07G01410 vs. NCBI_GenBank
Match: OQR98107.1 (hypothetical protein ACHHYP_20400 [Achlya hypogyna]) HSP 1 Score: 129.4 bits (324), Expect = 1.200e-26 Identity = 75/168 (44.64%), Postives = 100/168 (59.52%), Query Frame = 0 Query: 17 RRSLASATPTAVTLIRALSSASHTNPPPSPDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTY 185 R + A A P + S+ H N PP +T Q R ER ++H +K E P D S +DA+ RKR++YRSKQRGWLEVDLLLG WA+ENV +LT E +YE +LN+ETIDIFN I+G P E++ + ++KRLQ Y +SP GKAS + + Sbjct: 4 RAARAVARPRFTRALSTEHSSFHANLPPL-SITEAQEMRAQERNAQMRKEHFAMKAEFP----DASQGDVSIDADMANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTKEELSQYEDILNRETIDIFNFISGKDTVPPEID-TPMMKRLQAYCKTSPLGKASIQGF 165
BLAST of NO07G01410 vs. NCBI_GenBank
Match: XP_008611228.1 (hypothetical protein SDRG_07186 [Saprolegnia diclina VS20] >EQC35478.1 hypothetical protein SDRG_07186 [Saprolegnia diclina VS20]) HSP 1 Score: 126.3 bits (316), Expect = 1.000e-25 Identity = 80/181 (44.20%), Postives = 105/181 (58.01%), Query Frame = 0 Query: 4 MQPRALLLTAKAARRSLASATPTAVTLIRALSSASHTNPPPSPDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTY 185 M RA +L +AA R A A T S+ H N PP +T Q R R + ++H K E P D S +DA+ RKR++YRSKQRGWLEVDLLLG WA+ENV +LT E +YE +LN+ETIDIFN I+G P E++ + ++KRLQ Y +SP GKAS + + Sbjct: 1 MLARASILCGRAAPRMAARAFSTE-------HSSFHANLPPL-SITEAQELRAQVRNEQMRKEHFASKAEYP----DASQGEKAIDADMANRKRVIYRSKQRGWLEVDLLLGRWASENVMSLTADELRQYEDILNRETIDIFNFISGKDTVPPEID-TPMMKRLQAYCKTSPLGKASLQGF 168
BLAST of NO07G01410 vs. NCBI_GenBank
Match: XP_008893576.1 (hypothetical protein PPTG_01936 [Phytophthora parasitica INRA-310] >ETI44775.1 hypothetical protein F443_10531 [Phytophthora parasitica P1569] >ETL91298.1 hypothetical protein L917_10128 [Phytophthora parasitica] >ETM44644.1 hypothetical protein L914_10150 [Phytophthora parasitica] >ETN21850.1 hypothetical protein PPTG_01936 [Phytophthora parasitica INRA-310] >ETO73440.1 hypothetical protein F444_10621 [Phytophthora parasitica P1976] >ETP42694.1 hypothetical protein F442_10428 [Phytophthora parasitica P10297] >KUF80474.1 Succinate dehydrogenase assembly factor 2 [Phytophthora nicotianae] >KUF94525.1 hypothetical protein AM588_10007584 [Phytophthora nicotianae]) HSP 1 Score: 124.0 bits (310), Expect = 5.100e-25 Identity = 76/176 (43.18%), Postives = 105/176 (59.66%), Query Frame = 0 Query: 10 LLTAKAARRSLASATPTAVTLIRALSSASHTNPPPS-----PDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKAS 181 +L K + A+ + + +RALS TNP ++ DQ +R ER+ + DH+ K + PA S VD++ RKR++YRSKQRGWLEVDLLLG WA++NV LT E +YE +LN+ETIDIFN I+G P L+ + ++KRLQEY ++SP GKAS Sbjct: 1 MLRIKLTQVLAAARRSSRLQTLRALS----TNPDVDDKAFLKSISQDQAKRALERSAAIRADHISAKGDFPASSQGDH----QVDSDEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLTSDELQQYEDILNEETIDIFNYISGKSAVPQRLD-TPMMKRLQEYCLTSPLGKAS 167
BLAST of NO07G01410 vs. NCBI_GenBank
Match: ETK84784.1 (hypothetical protein L915_10288 [Phytophthora parasitica] >ETL38209.1 hypothetical protein L916_10190 [Phytophthora parasitica] >ETP14621.1 hypothetical protein F441_10468 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 124.0 bits (310), Expect = 5.100e-25 Identity = 76/180 (42.22%), Postives = 105/180 (58.33%), Query Frame = 0 Query: 10 LLTAKAARRSLASATPTAVTLIRALSSASHTNPPPS-----PDLTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTY 185 +L K + A+ + + +RALS TNP ++ DQ +R ER+ + DH+ K + PA S VD++ RKR++YRSKQRGWLEVDLLLG WA++NV LT E +YE +LN+ETIDIFN I+G P L+ + ++KRLQEY + SP GKAS + Sbjct: 1 MLRIKLTQVLAAARRSSRLQTLRALS----TNPDVDDKAFLKSISQDQAKRALERSAAIRADHISAKGDFPASSQGDH----QVDSDEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLTSDELQQYEDILNEETIDIFNYISGKSAVPQRLD-TPMMKRLQEYCLMSPLGKASIEAF 171
BLAST of NO07G01410 vs. NCBI_GenBank
Match: POM66210.1 (Succinate dehydrogenase subunit Emi5 [Phytophthora palmivora var. palmivora]) HSP 1 Score: 124.0 bits (310), Expect = 5.100e-25 Identity = 64/133 (48.12%), Postives = 90/133 (67.67%), Query Frame = 0 Query: 48 LTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKAS 181 ++ +Q ++ ER+ S DH+ K + P+ S VD++ RKR++YRSKQRGWLEVDLLLG WA++NV L+ E +YE +LN+ETIDIFN I+G P +L+ + ++KRLQEY +SSP GKAS Sbjct: 40 ISSEQAKKALERSASIRADHIATKGDFPS----ASHGEHQVDSDEANRKRIIYRSKQRGWLEVDLLLGRWASQNVMQLSKDELKQYEDILNEETIDIFNYISGKSDVPEQLD-TPMMKRLQEYCLSSPLGKAS 167
BLAST of NO07G01410 vs. NCBI_GenBank
Match: XP_008872066.1 (hypothetical protein H310_08184 [Aphanomyces invadans] >ETV99510.1 hypothetical protein H310_08184 [Aphanomyces invadans]) HSP 1 Score: 123.6 bits (309), Expect = 6.600e-25 Identity = 65/137 (47.45%), Postives = 89/137 (64.96%), Query Frame = 0 Query: 48 LTPDQIRRIGERTKSQLEDHLKLKTEVPAYSLDPSAPAGPVDANHIRRKRLLYRSKQRGWLEVDLLLGSWAAENVFTLTVAECDEYEKLLNQETIDIFNIINGAMPPPVELEGSKILKRLQEYAMSSPFGKASARTY 185 +T Q R+ ER ++H +TE PA S +DA+ RKR++YRS+QRGWLEVDLL+G WA+ENV+TLT E +YE +LN+ETIDIFN I+G P EL + I+KR+Q + S+P GKAS + + Sbjct: 37 ITEVQENRVQERYVQMRKEHFGRRTEFPA----ASQGEVDIDADTANRKRVIYRSRQRGWLEVDLLMGRWASENVWTLTADELQQYEDILNRETIDIFNFISGKDEIPEEL-NTPIMKRIQAFCFSNPLGKASIQGF 168 The following BLAST results are available for this feature:
BLAST of NO07G01410 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01410 ID=NO07G01410|Name=NO07G01410|organism=Nannochloropsis oceanica|type=gene|length=1419bpback to top protein sequence of NO07G01410.1 >NO07G01410.1-protein ID=NO07G01410.1-protein|Name=NO07G01410.1|organism=Nannochloropsis oceanica|type=polypeptide|length=195bpback to top Synonyms
Publications
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