NO07G01310, NO07G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01310 vs. NCBI_GenBank
Match: GBG25770.1 (ATP synthase subunit delta, mitochondrial [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 117.5 bits (293), Expect = 4.600e-23 Identity = 66/174 (37.93%), Postives = 103/174 (59.20%), Query Frame = 0 Query: 17 LAARGIFKAVARRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAAS--IYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVAL 189 +AAR + + R +H + T A+P A + +N +L +A+ + +PV V +PG+ GE+GV H+PV++ELK GVVQ+ G APE +FVSGG A H +S D++ E LD++D K+Y EA + + A EGS+E+ AQIEV+V + + ALG+++ Sbjct: 61 VAARRVGAKLGARALHA----SPTVRMMAEPEAAGSTSVNLTLASATKPVKSKEPVFLVNVPGMTGEFGVAAEHAPVLSELKPGVVQVTKAEGDAPESFFVSGGLASVHEDSSMDVSAAEIFSLDELDGSVAQKLYTEAKRKLDGAAEGSQEQAVAQIEVDVYEGVCVALGISV 230
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_008864102.1 (hypothetical protein H310_02387, partial [Aphanomyces invadans] >ETW08009.1 hypothetical protein H310_02387, partial [Aphanomyces invadans]) HSP 1 Score: 115.9 bits (289), Expect = 1.300e-22 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 0 Query: 28 RRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVA 188 RR +HTT + A+ AA AA + LN S P + Y+ V V +PG+ GEYG+T H+P+I++LK GV+ + E + +K+F +GGFA THANS TDIA VE K++DID + + A +G+ E+VEAQI E ++ AL A Sbjct: 27 RRSLHTTAIRAAADNAATG-AAATKVTLNLSTPHQAFYKGVQVDLVQVPGMIGEYGITAGHTPIISQLKPGVIAVHEEREKVVKKFFTAGGFAFTHANSTTDIAAVELIKVEDIDAAAAEAGVQKYKQALEQAADGTPEKVEAQIAYETHVAMVAALASA 185
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_009824242.1 (hypothetical protein H257_02353 [Aphanomyces astaci] >ETV85770.1 hypothetical protein H257_02353 [Aphanomyces astaci]) HSP 1 Score: 115.5 bits (288), Expect = 1.800e-22 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 0 Query: 28 RRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVA 188 RR +HTT + A+ + A + A + LN S P + Y+ V V +PGL GEYGVT H+P+I++LK GV+ + E + +K+F +GGFA THA+S TDIA VE K++DID + + A +G+ E+VEAQI E +L AL A Sbjct: 7 RRSIHTTALRAAAENAPSS-AVATKVTLNLSTPHQAFYKGVQVDLVQVPGLVGEYGVTAGHTPIISQLKPGVIAVHEERDKVVKKFFTAGGFAFTHADSTTDIAAVELIKVEDIDASAAEAGVQKYKQALEQAADGTPEKVEAQIAYETHLALVAALASA 165
BLAST of NO07G01310 vs. NCBI_GenBank
Match: KUF95179.1 (Flavohemoprotein [Phytophthora nicotianae]) HSP 1 Score: 115.5 bits (288), Expect = 1.800e-22 Identity = 72/171 (42.11%), Postives = 103/171 (60.23%), Query Frame = 0 Query: 16 MLAARGIFKAVARRGVHTTRVLASTKPAAADPAA--GDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ML+A F A R +HT+ L++ AAAD AA + LN + P + Y+ V V IPG+ GEYGVT H+PV+++LK GV+++ E + +F +GGFALTHANSVTDIA VE K++DID + + +APEGS+E++ AQI V+ ++ AL Sbjct: 1 MLSATSRF---AARTLHTSSRLSA---AAADQAAATATKVTLNLTTPYQAFYKGAEVDLVQIPGVIGEYGVTAGHTPVLSQLKPGVIKVHVEREKDVHSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQAQLASAPEGSEEKLNAQIGVDTHAAMVAAL 165
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_008915127.1 (hypothetical protein PPTG_18704 [Phytophthora parasitica INRA-310] >ETI31034.1 hypothetical protein F443_21952 [Phytophthora parasitica P1569] >ETK71416.1 hypothetical protein L915_21347 [Phytophthora parasitica] >ETL24855.1 hypothetical protein L916_21218 [Phytophthora parasitica] >ETL78072.1 hypothetical protein L917_21072 [Phytophthora parasitica] >ETM31336.1 hypothetical protein L914_21086 [Phytophthora parasitica] >ETM99631.1 hypothetical protein PPTG_18704 [Phytophthora parasitica INRA-310] >ETO59737.1 hypothetical protein F444_21971 [Phytophthora parasitica P1976] >ETP00830.1 hypothetical protein F441_21837 [Phytophthora parasitica CJ01A1] >ETP28976.1 hypothetical protein F442_21815 [Phytophthora parasitica P10297] >KUF76479.1 ATP synthase subunit delta' [Phytophthora nicotianae]) HSP 1 Score: 115.2 bits (287), Expect = 2.300e-22 Identity = 71/171 (41.52%), Postives = 103/171 (60.23%), Query Frame = 0 Query: 16 MLAARGIFKAVARRGVHTTRVLASTKPAAADPAA--GDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ML+A F A R +HT+ L++ AAAD AA + LN + P + Y+ V V IPG+ GEYGVT H+PV+++LK GV+++ E + +F +GGFALTHANSVTDIA VE K++DID + + +APEGS+E++ AQI V+ ++ A+ Sbjct: 1 MLSATSRF---AARALHTSSRLSA---AAADQAAATATKVTLNLTTPYQAFYKGAEVDLVQIPGVIGEYGVTAGHTPVLSQLKPGVIKVHVEREKDVHSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQAQLASAPEGSEEKLNAQIGVDTHAAMVAAV 165
BLAST of NO07G01310 vs. NCBI_GenBank
Match: OQS07925.1 (ATP synthase subunit delta' [Thraustotheca clavata]) HSP 1 Score: 114.8 bits (286), Expect = 3.000e-22 Identity = 65/157 (41.40%), Postives = 93/157 (59.24%), Query Frame = 0 Query: 28 RRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 RR +H+T + A+ + + AA + LN + P S Y+ V V IPGL GEYG+T H+P+I++LK GV+ + E + +K+F +GGFA THA+SVTDIA VE K++DID + + + A GS ERVEAQI E ++ AL Sbjct: 7 RRSIHSTALRAAAEQTSG--AAATKVTLNLNTPHQSFYKKTEVDLVQIPGLVGEYGITARHTPIISQLKPGVIIVHEERDKVVKKFFTAGGFAFTHADSVTDIACVELVKVEDIDASAAEAGVTKYKQLMDQATPGSVERVEAQIAYETHVAMVAAL 161
BLAST of NO07G01310 vs. NCBI_GenBank
Match: OWZ24159.1 (ATP synthase, delta subunit [Phytophthora megakarya]) HSP 1 Score: 114.4 bits (285), Expect = 3.900e-22 Identity = 70/171 (40.94%), Postives = 104/171 (60.82%), Query Frame = 0 Query: 16 MLAARGIFKAVARRGVHTTRVLASTKPAAADPAA--GDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ML+A F A R +HT+ L++ +AAD AA + LN + P + Y++ V V IPG+ GEYGVT H+PV+++LK GV+++ E + +F +GGFALTHANSVTDIA VE K++DID + + +APEGS+E++ AQI V+ ++ A+ Sbjct: 1 MLSATSRF---AARALHTSSRLSA---SAADQAAATATKVTLNLTTPYQAFYKDAEVDLVQIPGVIGEYGVTAGHTPVLSQLKPGVIKVHVEREKDVHSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQAQLASAPEGSEEKLNAQIGVDTHAAMVAAV 165
BLAST of NO07G01310 vs. NCBI_GenBank
Match: GAY02510.1 (ATP synthase subunit delta' putative [Pythium insidiosum]) HSP 1 Score: 114.0 bits (284), Expect = 5.100e-22 Identity = 69/157 (43.95%), Postives = 96/157 (61.15%), Query Frame = 0 Query: 29 RGVHTT-RVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 R +HTT R +AS AA A + LN + P + ++N V V IPG+ GEYGVT H+P+I++LK GVV++ E + + +F +GGFALTHA+S TDIA VE KL+D+D + AAPEGS E+ EAQI ++V ++L AL Sbjct: 10 RSLHTTARRMASDASGAA--ATATKVTLNLTSPYQAFFKNAQVDLVQIPGVDGEYGVTAGHTPIISQLKPGVVKVHVEREKDVQSFFTAGGFALTHADSTTDIACVELVKLEDVDAAAAEAGLNKYKAAVAAAPEGSAEKAEAQIGLDVHQALVSAL 164
BLAST of NO07G01310 vs. NCBI_GenBank
Match: EJK46633.1 (hypothetical protein THAOC_34688, partial [Thalassiosira oceanica]) HSP 1 Score: 112.8 bits (281), Expect = 1.100e-21 Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 0 Query: 55 LNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVALA 190 LNF+LP +++ + V+SVV+PG GEY VT +H P++AELKAG++ + H G+ EKYFV GGF+LTH S TDI EA K+DD+D + Y A A IEVEV +++ GALG++LA Sbjct: 89 LNFNLPQQTLFDSTEVSSVVVPGAMGEYEVTADHVPIVAELKAGMLTVKHGGGE-EEKYFVPGGFSLTHEGSTTDIVCPEAVKVDDLDVSAVTANYEAAXXXXXXXXXXXXXXXXAMIEVEVNRAMGGALGLSLA 222
BLAST of NO07G01310 vs. NCBI_GenBank
Match: CCI41129.1 (unnamed protein product [Albugo candida]) HSP 1 Score: 110.9 bits (276), Expect = 4.300e-21 Identity = 62/164 (37.80%), Postives = 95/164 (57.93%), Query Frame = 0 Query: 24 KAVARRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVA 188 +A+ +R H V A+ + + LN S P I++ V + IPG GEYGVT H+P+I+++K G++++ E + + +F +GGFA THA+SVTDIA VE KLDDID+D ++ A +GS E+++AQI +E ++LA AL A Sbjct: 7 RAIVKRAFHNA-VSCRAAEASTTTSTPQKVTLNLSTPYQCIFKETKVDLIQIPGAVGEYGVTAGHTPIISQMKPGLIKVHLEREKDVQTFFTAGGFAFTHADSVTDIACVELVKLDDIDRDAAEAGLSKYKSIVATAADGSAEKIDAQIGLETHQALAAALAAA 169 The following BLAST results are available for this feature:
BLAST of NO07G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01310 ID=NO07G01310|Name=NO07G01310|organism=Nannochloropsis oceanica|type=gene|length=1570bpback to top protein sequence of NO07G01310.1 >NO07G01310.1-protein ID=NO07G01310.1-protein|Name=NO07G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bpback to top Synonyms
Publications
|