NO07G01310, NO07G01310 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01310 vs. NCBI_GenBank
Match: EWM27238.1 (atp synthase subunit delta [Nannochloropsis gaditana]) HSP 1 Score: 297.0 bits (759), Expect = 4.200e-77 Identity = 155/173 (89.60%), Postives = 165/173 (95.38%), Query Frame = 0 Query: 16 MLAARGIFKAVARRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVAL 189 ML ARGIF+ ARRGVHTTR+LAST PAAAD ++GDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHE GQAPEK+FVSGGFALTHANSVTDIAVVEAAKL+DID +E+PKIYAEAMKD+NAA EGSKE+VEAQIEVEVAKSLAGALGVAL Sbjct: 1 MLVARGIFQLAARRGVHTTRILASTAPAAADASSGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHETGQAPEKFFVSGGFALTHANSVTDIAVVEAAKLEDIDVEEVPKIYAEAMKDYNAAAEGSKEKVEAQIEVEVAKSLAGALGVAL 173
BLAST of NO07G01310 vs. NCBI_GenBank
Match: CBJ32297.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 157.5 bits (397), Expect = 4.000e-35 Identity = 85/169 (50.30%), Postives = 111/169 (65.68%), Query Frame = 0 Query: 30 GVHTTRVLASTKPA---------AADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVALA 190 GV RV + +PA A PA + LNF LP +IY++K V V+IPG AGEYGVT HSP++AELK GVVQ+VHE GQ PE +FVS GFALTH SVTDI +EA ++++ID+ + Y A ++ +AA EGS+E EAQ+ VE K++A A+GV LA Sbjct: 3 GVAARRVAGAARPALRTARCFSTAEAPAV---MKLNFCLPHETIYKDKDVDQVIIPGSAGEYGVTAGHSPIVAELKPGVVQVVHEAGQEPENFFVSAGFALTHPTSVTDITAIEAVRVEEIDEGAVKSSYDAAKREMDAATEGSREAAEAQVAVETTKAMAAAIGVVLA 168
BLAST of NO07G01310 vs. NCBI_GenBank
Match: GAX25764.1 (F-type H+-transporting ATPase subunit delta [Fistulifera solaris]) HSP 1 Score: 145.2 bits (365), Expect = 2.100e-31 Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0 Query: 55 LNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQA-PEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVAL 189 LNF LP ++Y+ V SV++PG+ GEYG+T NH P +++LK GVV+I+HE G A PEKYFV+GG+ALTH +S TD+ EA KLDDID E+ K Y A F++A GS E+ EAQIE+E+ K + A+GV+L Sbjct: 28 LNFCLPQETLYKGASVHSVILPGMGGEYGITANHVPYVSQLKPGVVKILHEEGSADPEKYFVAGGYALTHPDSTTDVICPEAVKLDDIDPSEVAKKYDAARTKFSSAAAGSIEQAEAQIEMEITKEMGMAIGVSL 162
BLAST of NO07G01310 vs. NCBI_GenBank
Match: GAX15372.1 (F-type H+-transporting ATPase subunit delta [Fistulifera solaris]) HSP 1 Score: 145.2 bits (365), Expect = 2.100e-31 Identity = 72/135 (53.33%), Postives = 97/135 (71.85%), Query Frame = 0 Query: 55 LNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQA-PEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVAL 189 LNF LP ++Y+ V SV++PG+ GEYG+T NH P +++LK GVV+I+HE G A PEKYFV+GG+ALTH +S TD+ EA KLDDID E+ K Y A F++A GS E+ EAQIE+E+ K + A+GV+L Sbjct: 28 LNFCLPQETLYKGASVHSVILPGMGGEYGITANHVPYVSQLKPGVVKILHEEGSADPEKYFVAGGYALTHPDSTTDVICPEAVKLDDIDPSEVAKKYDAARTKFSSATAGSIEQAEAQIEMEITKEMGMAIGVSL 162
BLAST of NO07G01310 vs. NCBI_GenBank
Match: OEU20739.1 (epsilon subunit of F1F0-ATP synthase N-terminal domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 131.3 bits (329), Expect = 3.100e-27 Identity = 73/169 (43.20%), Postives = 105/169 (62.13%), Query Frame = 0 Query: 26 VARRGVHTTRVLASTKPAAA------DPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGALGVAL 189 VA++ + T VL +++ AAA AA ++ LNFS+P SIY V V+IPG+ GEYGVT NH P +A++K G++ ++ + ++ EKYFV+GG+A+THANSVTD+ VEA K+DD+D + Y A E EAQI++EV K++ ALGV L Sbjct: 8 VAKKVLSRTSVLGASRAAAARTFSSESEAAASSVSLNFSVPYESIYNGASVEQVIIPGVEGEYGVTANHVPYVAQMKPGILTVMFDSSES-EKYFVAGGYAVTHANSVTDVVCVEAVKVDDLDVSVVSANYEAAKSAXXXXXXXXXEEAEAQIDMEVNKTMGAALGVTL 175
BLAST of NO07G01310 vs. NCBI_GenBank
Match: OQR92237.1 (ATP synthase subunit delta' [Achlya hypogyna]) HSP 1 Score: 119.8 bits (299), Expect = 9.300e-24 Identity = 68/157 (43.31%), Postives = 95/157 (60.51%), Query Frame = 0 Query: 28 RRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 RR +H+T V A+ + A+A A + LN + P S Y+ V V IPGL GEYG+T H+P+I++LK GV+ + E + +K+F +GGFA THA+SVTDIA VE K++DID A+ + A +GS ERVEAQI E ++ AL Sbjct: 7 RRSIHSTAVRAAAENASA--AGATKVTLNLNTPHQSFYKKAEVDLVQIPGLVGEYGITARHTPIISQLKPGVIVVHEERDKVVKKFFTAGGFAFTHADSVTDIACVELVKVEDIDASAAEAGVAKYKSLMDQAAQGSVERVEAQIAYETHVAMVAAL 161
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_009537353.1 (hypothetical protein PHYSODRAFT_288955 [Phytophthora sojae] >EGZ07787.1 hypothetical protein PHYSODRAFT_288955 [Phytophthora sojae]) HSP 1 Score: 119.4 bits (298), Expect = 1.200e-23 Identity = 73/171 (42.69%), Postives = 105/171 (61.40%), Query Frame = 0 Query: 16 MLAARGIFKAVARRGVHTTRVLASTKPAAADPAA--GDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ML+A F A R +HT+ L++ AAAD AA + LN + P + Y+N V V IPG+ GEYGVT H+PV+A+LK GV+++ E + + +F +GGFALTHANSVTDIA VE K++DID + + +APEGS+E++ AQI V+ ++ A+ Sbjct: 1 MLSATSRF---AARALHTSSRLSA---AAADQAAATATKVTLNLTTPYQAFYKNAEVDLVQIPGVIGEYGVTAGHTPVLAQLKPGVIKVHVEREKDVQSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQAQLASAPEGSEEKLNAQIGVDTHAAMVAAV 165
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_012195659.1 (ATP synthase F1 [Saprolegnia parasitica CBS 223.65] >KDO33613.1 ATP synthase F1 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 119.0 bits (297), Expect = 1.600e-23 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 0 Query: 27 ARRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ARR +H+T + A+ + A+A A + LN + P S Y+ V V IPGL GEYG+T H+P+I++LK GV+ + E + +K+F +GGFA THA+SVTDIA VE K++DID + + + A +GS ERVEAQI E ++ AL Sbjct: 6 ARRSIHSTALRAAAENASA--AGATKVTLNLNTPHQSFYKKAEVDLVQIPGLVGEYGITARHTPIISQLKPGVIVVHEERDKVVKKFFTAGGFAFTHADSVTDIACVELVKVEDIDASAAEAGVTKYKQLMDQAAQGSVERVEAQIAYETHVAMVAAL 161
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_008615983.1 (hypothetical protein SDRG_11712 [Saprolegnia diclina VS20] >EQC30657.1 hypothetical protein SDRG_11712 [Saprolegnia diclina VS20]) HSP 1 Score: 118.6 bits (296), Expect = 2.100e-23 Identity = 67/158 (42.41%), Postives = 96/158 (60.76%), Query Frame = 0 Query: 27 ARRGVHTTRVLASTKPAAADPAAGDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ARR +H+T + A+ + A+A A + LN + P S Y+ V V IPGL GEYG+T H+P+I++LK GV+ + E + +K+F +GGFA THA+SVTDIA VE K++DID + + + A +GS ERVEAQI E ++ AL Sbjct: 6 ARRSIHSTALRAAAENASA--AGATKVTLNLNTPHQSFYKKAEVDLVQIPGLVGEYGITARHTPIISQLKPGVIIVHEERDKVVKKFFTAGGFAFTHADSVTDIACVELVKVEDIDASAAEAGVTKYKQLMDQAAQGSVERVEAQIAYETHVAMVAAL 161
BLAST of NO07G01310 vs. NCBI_GenBank
Match: XP_002904018.1 (ATP synthase subunit delta', putative [Phytophthora infestans T30-4] >EEY54196.1 ATP synthase subunit delta', putative [Phytophthora infestans T30-4]) HSP 1 Score: 117.5 bits (293), Expect = 4.600e-23 Identity = 72/171 (42.11%), Postives = 103/171 (60.23%), Query Frame = 0 Query: 16 MLAARGIFKAVARRGVHTTRVLASTKPAAADPAA--GDNLILNFSLPAASIYRNKPVASVVIPGLAGEYGVTKNHSPVIAELKAGVVQIVHEPGQAPEKYFVSGGFALTHANSVTDIAVVEAAKLDDIDQDEIPKIYAEAMKDFNAAPEGSKERVEAQIEVEVAKSLAGAL 185 ML+A F A R +HT+ L++ AA D AA + LN + P + Y+ V V IPG+ GEYGVT H+PV+A+LK GV+Q+ E + + +F +GGFALTHANSVTDIA VE K++DID + + +APEGS+E++ AQI V+ ++ A+ Sbjct: 1 MLSATSRF---AARALHTSSRLSA---AATDQAAATATKVTLNLTTPYQAFYKGAEVDLVQIPGVIGEYGVTAGHTPVLAQLKPGVIQVHVEREKDVQSFFTAGGFALTHANSVTDIACVELVKVEDIDPEAAQAGLTKYQSQLASAPEGSEEKLNAQIGVDTHAAMVAAV 165 The following BLAST results are available for this feature:
BLAST of NO07G01310 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01310 ID=NO07G01310|Name=NO07G01310|organism=Nannochloropsis oceanica|type=gene|length=1570bpback to top protein sequence of NO07G01310.1 >NO07G01310.1-protein ID=NO07G01310.1-protein|Name=NO07G01310.1|organism=Nannochloropsis oceanica|type=polypeptide|length=190bpback to top Synonyms
Publications
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