NO07G01230, NO07G01230 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_007705507.1 (hypothetical protein COCSADRAFT_128938 [Bipolaris sorokiniana ND90Pr] >EMD59086.1 hypothetical protein COCSADRAFT_128938 [Bipolaris sorokiniana ND90Pr]) HSP 1 Score: 146.0 bits (367), Expect = 2.000e-31 Identity = 84/202 (41.58%), Postives = 114/202 (56.44%), Query Frame = 0 Query: 91 PCRGNLHEWHFSIAGPP-GSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRRRIG-KIEGRRGGDRVAMTEKGYDACFVSLFD 290 P NL EWHF+I GPP S + GGIYHGR++LP+ YP P + L P+GRFEV +ICLS + H+ETWQP W VRT + ALRS M T A ++GGIECS R+ +A+ S ++C GC ++ +I E+ LV E+E +E G KEE R+ + E +GGD + +KG S+ D Sbjct: 36 PLETNLFEWHFTICGPPEPSPYAGGIYHGRIILPSSYPLRPPSFRFLTPTGRFEVNREICLSISGHHEETWQPAWGVRTALVALRSFMDTDAKGQLGGIECSKEARQRMAKESGAWKCAGCAKSNA----EIIEERAALVKEIEEKE------------GKRKEEEVPEELRLAYRDELGKGGDGDSKMDKGKGRAVESVTD 221
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_007711003.1 (hypothetical protein COCCADRAFT_92824 [Bipolaris zeicola 26-R-13] >EUC34655.1 hypothetical protein COCCADRAFT_92824 [Bipolaris zeicola 26-R-13]) HSP 1 Score: 146.0 bits (367), Expect = 2.000e-31 Identity = 84/202 (41.58%), Postives = 113/202 (55.94%), Query Frame = 0 Query: 91 PCRGNLHEWHFSIAGPP-GSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRRRIG-KIEGRRGGDRVAMTEKGYDACFVSLFD 290 P NL EWHF+I GPP S + GGIYHGR++LP+ YP P + L P+GRFEV +ICLS + H+ETWQP W VRT + ALRS M T A ++GGIECS R+ +A+ S ++C GC ++ +I E+ LV E+E +E G KEE R+ + E +GGD + +KG S D Sbjct: 36 PLETNLFEWHFTICGPPEPSPYAGGIYHGRIILPSSYPLRPPSFRFLTPTGRFEVNREICLSISGHHEETWQPAWGVRTALVALRSFMDTDAKGQLGGIECSKEARQRMAKESGAWKCAGCAKSNA----EIIEERAALVKEIEEKE------------GKRKEEEVPEELRLAYRDELGKGGDGDSKVDKGKGRAIESATD 221
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_013999665.1 (PREDICTED: ubiquitin-conjugating enzyme E2 J1-like isoform X1 [Salmo salar]) HSP 1 Score: 144.4 bits (363), Expect = 5.800e-31 Identity = 77/181 (42.54%), Postives = 101/181 (55.80%), Query Frame = 0 Query: 35 INRGGK----SSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 I GG+ S SC P +VKRLMKE L + TEH P NL EWHFS+ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C CG Sbjct: 18 IANGGRFSRGSFSCRP-----AVKRLMKE-----------------AAELRDPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYNPEERRGLAKKSQDFCCETCG 176
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_020351960.1 (ubiquitin-conjugating enzyme E2 J1-like isoform X1 [Oncorhynchus kisutch]) HSP 1 Score: 144.4 bits (363), Expect = 5.800e-31 Identity = 76/178 (42.70%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 34 SINRGGKSSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +++RG S SC P +VKRLMKE L + TEH P NL EWHFS+ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C CG Sbjct: 22 TLSRG--SFSCQP-----AVKRLMKE-----------------AAELRHPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYNPEERRGLAKKSQDFCCETCG 175
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_020351961.1 (ubiquitin-conjugating enzyme E2 J1-like isoform X2 [Oncorhynchus kisutch]) HSP 1 Score: 144.4 bits (363), Expect = 5.800e-31 Identity = 76/178 (42.70%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 34 SINRGGKSSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +++RG S SC P +VKRLMKE L + TEH P NL EWHFS+ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C CG Sbjct: 22 TLSRG--SFSCQP-----AVKRLMKE-----------------AAELRHPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYNPEERRGLAKKSQDFCCETCG 175
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_024275626.1 (ubiquitin-conjugating enzyme E2 J1-like isoform X1 [Oncorhynchus tshawytscha]) HSP 1 Score: 144.4 bits (363), Expect = 5.800e-31 Identity = 76/178 (42.70%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 34 SINRGGKSSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +++RG S SC P +VKRLMKE L + TEH P NL EWHFS+ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C CG Sbjct: 22 TLSRG--SFSCQP-----AVKRLMKE-----------------AAELRHPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYNPEERRGLAKKSQDFCCETCG 175
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_024275627.1 (ubiquitin-conjugating enzyme E2 J1-like isoform X2 [Oncorhynchus tshawytscha]) HSP 1 Score: 144.4 bits (363), Expect = 5.800e-31 Identity = 76/178 (42.70%), Postives = 102/178 (57.30%), Query Frame = 0 Query: 34 SINRGGKSSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +++RG S SC P +VKRLMKE L + TEH P NL EWHFS+ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C CG Sbjct: 22 TLSRG--SFSCQP-----AVKRLMKE-----------------AAELRHPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYNPEERRGLAKKSQDFCCETCG 175
BLAST of NO07G01230 vs. NCBI_GenBank
Match: PUU83537.1 (ubiquitin-conjugating enzyme/RWD-like protein [Tuber borchii]) HSP 1 Score: 144.4 bits (363), Expect = 5.800e-31 Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 0 Query: 82 NNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEV 232 N E AP NL EWHF++ GPPG+ + GIYHGR+ LP+ YP P + + PSGRFEV +ICLS + H++TWQP W VRT V ALR M T+A +VGG+EC RR +A+ + ++C GCG + G+I E +L E+ Sbjct: 119 NPAEDYHAAPLDENLFEWHFTLRGPPGTPYADGIYHGRITLPSHYPLRPPSFRFMTPSGRFEVNREICLSISGHHEDTWQPAWGVRTAVVALRGFMETEAKGQVGGVECDEETRRGIAKGTGEWRCSGCGGRSN---GEILEGCRVLAEEM 266
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_012299680.1 (ubiquitin-conjugating enzyme E2 J1 isoform X1 [Aotus nancymaae]) HSP 1 Score: 144.1 bits (362), Expect = 7.600e-31 Identity = 69/163 (42.33%), Postives = 96/163 (58.90%), Query Frame = 0 Query: 49 LDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 ++L+VKRLMKE L + T+H P NL EWHF++ GPP S F+GG+YHGR++LP +YP P + +L +GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C GCG Sbjct: 20 IELAVKRLMKE-----------------AAELKDPTDHYHAQPLEDNLFEWHFTVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTANGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEGCG 165
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_018558929.1 (PREDICTED: ubiquitin-conjugating enzyme E2 J1 isoform X1 [Lates calcarifer]) HSP 1 Score: 144.1 bits (362), Expect = 7.600e-31 Identity = 70/160 (43.75%), Postives = 93/160 (58.13%), Query Frame = 0 Query: 52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211 +VKRLMKE L + TEH P NL EWHFS+ GPP S F+GG+YHGR++LP +YP P + +L P+GRFEVG ICLS + H ETWQP W++RT + A+ M TK +G ++ + RR LA++S+ F C CG Sbjct: 11 AVKRLMKE-----------------AAELRDPTEHYHAQPLEDNLFEWHFSVRGPPDSDFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALIAIIGFMPTKGEGAIGSLDYTPEERRALAKKSQDFCCEACG 153 The following BLAST results are available for this feature:
BLAST of NO07G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G01230 ID=NO07G01230|Name=NO07G01230|organism=Nannochloropsis oceanica|type=gene|length=2349bpback to top protein sequence of NO07G01230.1 >NO07G01230.1-protein ID=NO07G01230.1-protein|Name=NO07G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bpback to top Synonyms
Publications
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