NO07G01230, NO07G01230 (gene) Nannochloropsis oceanica

Overview
NameNO07G01230
Unique NameNO07G01230
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2349
Alignment locationchr7:392739..395087 -

Link to JBrowse

Properties
Property NameValue
DescriptionUbiquitin-conjugating enzyme e2 j1
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:392739..395087 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G01230 vs. NCBI_GenBank
Match: EWM27260.1 (ubiquitin-conjugating enzyme e2 j1 [Nannochloropsis gaditana])

HSP 1 Score: 346.7 bits (888), Expect = 7.700e-92
Identity = 183/286 (63.99%), Postives = 213/286 (74.48%), Query Frame = 0
Query:   28 PSAATVSINRGGKSS-SCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRRRIGKIEGRRGGDRVAMTEKGYDACFVSLFDRYKLPLVLGIAFLLAFLWLNVSS 313
            PS A    N+GGK S   LPRS  LS +RL+KEWR +MAEGLVL++ G GNCSL+NNTEHIRLAPCRGNLHEWHFS+AGPPGSV+EGGIYHGRV+LPA+YP +APRLQMLNPSGRFEVGADICLSAT+FHQETWQPVWTVRTLVSALRSHM T A+EVGG+ECSARRR+ LA+RSR F CRGCGVDHS FPG++F  LP  V EV            S V G G+  G  R  R G+  G    DR A +     A  V++  R+K+ ++L + F + FL LN SS
Sbjct:   28 PSYALHIPNKGGKKSPPGLPRSFALSYRRLIKEWRGIMAEGLVLMDSGEGNCSLSNNTEHIRLAPCRGNLHEWHFSVAGPPGSVYEGGIYHGRVILPANYPQTAPRLQMLNPSGRFEVGADICLSATSFHQETWQPVWTVRTLVSALRSHMATPAVEVGGMECSARRRKFLARRSRGFLCRGCGVDHSNFPGRVFRSLPE-VGEV------------SRVPGRGETRG--RGNRGGRETGVGVADRAAFSGL---ARLVAVLRRHKVSVLLCLVFWMCFLVLNASS 295          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: CBN79943.1 (similar to ubiquitin-conjugating enzyme E2, J1 (predicted) [Ectocarpus siliculosus])

HSP 1 Score: 166.0 bits (419), Expect = 1.900e-37
Identity = 101/259 (39.00%), Postives = 146/259 (56.37%), Query Frame = 0
Query:   52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIE-CSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRRRIGKIEGRRGGDRVAMTEKGYDACFVSLFDRYKLPLVLGIAFLLAFLWLN 310
            S++R+M EW+ V A+GL +    G + S  N++E  RL P  GN+ EWHF+  G   S FEGG+YHG + LP +YP S P +++LN + RF+VG+ ICLSA+ +HQETWQP WTV +LVSAL +HMT  A+E+G +   +  ++R  A +SR F C  CG  H  FP    ED   +    +  +K  A    SA     + EG   R  +G  E      R  +T +   +  V L      P +L +A ++A ++LN
Sbjct:   14 SMRRIMSEWKQVQADGLAM--GEGRSSSKGNSSETFRLKPV-GNMFEWHFTFLGAKDSPFEGGLYHGSISLPENYPQSGPSVRLLNTNMRFKVGSRICLSASEYHQETWQPSWTVASLVSALVAHMTEAAVEIGAVRGATPSQKRKAAVKSRSFVCAACGCCHHAFP----EDRFPIPKGFDKGKKAGAGDDGSA---GARREG---RVAVGVGEAPAAASRGGLTGRSRLSWTVRLVT--SKPFLLALALIIASVFLN 257          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: GAX09697.1 (hypothetical protein FisN_19Lh166 [Fistulifera solaris])

HSP 1 Score: 157.5 bits (397), Expect = 6.700e-35
Identity = 78/153 (50.98%), Postives = 99/153 (64.71%), Query Frame = 0
Query:   53 VKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQP-VWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRF 205
            V R+ +EWR  +  G+      G     +    HI L P   +L  WHFSI G PGSVFE G+YHGR++LP DYPS+ PR+ ML PSGRF  G DICLSA+ +H ETWQP VW +RTLV +LR HM T A E+GG+  S  +R + AQ SR++
Sbjct:   88 VLRIQREWRDAINNGMAFDWIQGTPRGKSTAASHIWLGPLGSSLLIWHFSITGVPGSVFEHGVYHGRIVLPPDYPSTPPRVMMLTPSGRFVPGVDICLSASHYHPETWQPNVWNLRTLVESLRLHMCTMAKEIGGLNDSYEKRLVYAQASRKW 240          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: GAX19587.1 (hypothetical protein FisN_19Hh166 [Fistulifera solaris])

HSP 1 Score: 155.2 bits (391), Expect = 3.300e-34
Identity = 77/153 (50.33%), Postives = 96/153 (62.75%), Query Frame = 0
Query:   53 VKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQP-VWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRF 205
            + R+ +EWR  +  G+      G     T    HI L P   +L  WHFSI G PGSVFE G+YHGR++LP DYPS+ PR+ ML PSGRF  G DICLSA+ +H ETWQP  W +RTLV +LR HM T A E+GG+  S  +R   AQ SR +
Sbjct:   80 ILRIQREWRDAIKNGMAFDWMQGTPRGKTAAASHIWLGPLGSSLLIWHFSITGVPGSVFERGVYHGRIVLPPDYPSTPPRVMMLTPSGRFLPGVDICLSASHYHPETWQPNAWNLRTLVESLRLHMCTTAKEIGGLNDSYEKRLEYAQASREW 232          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_002292659.1 (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >EED89855.1 predicted protein, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 153.3 bits (386), Expect = 1.300e-33
Identity = 71/128 (55.47%), Postives = 89/128 (69.53%), Query Frame = 0
Query:   75 GGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSR 203
            G + + + N +++R+ P   NL  WHFS+ GP  SV+EGG+YHGRVLLP DYP S PR+QML PSGRF  G DICLSA+ +H ETW P WTV +LV ALR HM T A E+GG+  +  +RR  A  SR
Sbjct:    5 GSSNNESRNNDYVRIGPFGKNLLRWHFSVMGPSNSVYEGGVYHGRVLLPKDYPGSPPRVQMLTPSGRFICGEDICLSASNYHPETWTPRWTVISLVDALRLHMLTTANEIGGLLSTDEKRRQYALESR 132          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: EJK77027.1 (hypothetical protein THAOC_01168 [Thalassiosira oceanica])

HSP 1 Score: 150.6 bits (379), Expect = 8.100e-33
Identity = 80/189 (42.33%), Postives = 110/189 (58.20%), Query Frame = 0
Query:   28 PSAATVSINRGGKSSSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCS---LTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRFQCRGCGVDH 214
            PS  T S++   + + CL        +R+ +EWR  +  G+      G   +    ++   ++RL P   N+  WHFS  GP  SV+  G+YHG+V+LP DYP S PR+QML PSGRF  G DICLSA+ +H E+W P WTV +LV ALR HM T A E+GG+  S  +RR  A+ S+ +   G  VDH
Sbjct:  248 PSRRTQSVST--RDNECL--------RRVKREWREAVKMGVAFDWTTGHTINEQLPSDRNNYVRLGPLGKNMLRWHFSCQGPANSVYSTGLYHGKVILPRDYPGSPPRVQMLTPSGRFLCGHDICLSASNYHPESWTPRWTVLSLVDALRLHMLTTANEIGGVSASDEKRRQYAESSQSWNVPGV-VDH 425          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_006007150.1 (PREDICTED: ubiquitin-conjugating enzyme E2 J1 isoform X1 [Latimeria chalumnae])

HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31
Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0
Query:   52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211
            +VKRLMKE                    L + TEH    P   NL EWHF++ GPP S F+GG+YHGR++LP +YP   P + +L P+GRFEVG  ICLS +  H ETWQP W++RT + A+   M TK    +G ++ +   R+ LA+RS+ F C GCG
Sbjct:   11 AVKRLMKE-----------------AAELKDPTEHYHAQPLEDNLFEWHFTVRGPPDSEFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERKALAKRSQEFCCEGCG 153          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_006007151.1 (PREDICTED: ubiquitin-conjugating enzyme E2 J1 isoform X2 [Latimeria chalumnae])

HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31
Identity = 70/160 (43.75%), Postives = 94/160 (58.75%), Query Frame = 0
Query:   52 SVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCG 211
            +VKRLMKE                    L + TEH    P   NL EWHF++ GPP S F+GG+YHGR++LP +YP   P + +L P+GRFEVG  ICLS +  H ETWQP W++RT + A+   M TK    +G ++ +   R+ LA+RS+ F C GCG
Sbjct:   11 AVKRLMKE-----------------AAELKDPTEHYHAQPLEDNLFEWHFTVRGPPDSEFDGGVYHGRIVLPPEYPMKPPSIILLTPNGRFEVGKKICLSISGHHPETWQPSWSIRTALLAIIGFMPTKGEGAIGSLDYTPEERKALAKRSQEFCCEGCG 153          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: XP_002184772.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC43831.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31
Identity = 89/236 (37.71%), Postives = 133/236 (56.36%), Query Frame = 0
Query:   31 ATVSINRGGKS---SSCLPRSLDLSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQP-VWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQRSRRFQCR---GCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNGKEEGTARRR 260
            +T +++R  K    SS L R    S++R+ +EW+ ++ +G +  +   G        +H+ L P   NL  WHFS  G P SVFE GIYHGRV+LP +YP+  PR+Q+  PSGRF+   DICLSA+ +H E+W P  W+VRT+V +LR HM T A E+GG   S   R+  A +SR ++ R      +DH     ++ +D     + ++ EE   AS + +A   NG E G +  +
Sbjct:   55 STSTLSRRSKKATLSSSLSRDQTTSIRRIQREWKDIVQQG-IAFDWKRGRPYKFRGPQHVYLGPISNNLWIWHFSFMGLPHSVFEDGIYHGRVILPPNYPARPPRVQVWTPSGRFQTRFDICLSASNYHPESWTPSAWSVRTIVESLRLHMITAAHEIGGTNDSYEDRKEYAVQSRAWKVRVRPDVLIDHE----RMLKD-GYFSSLIKTEESDEASLTENA---NGLEIGDSNTK 281          
BLAST of NO07G01230 vs. NCBI_GenBank
Match: CUS15508.1 (unnamed protein product [Tuber aestivum])

HSP 1 Score: 146.4 bits (368), Expect = 1.500e-31
Identity = 74/168 (44.05%), Postives = 97/168 (57.74%), Query Frame = 0
Query:   82 NNTEHIRLAPCRGNLHEWHFSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICLSATAFHQETWQPVWTVRTLVSALRSHMTTKAL-EVGGIECSARRRRLLAQRSRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTG 249
            N  E    AP   NL EWHF++ GPPG+ +  GIYHGR+ LP DYP   P  + + PSGRFEV  +ICLS +  H++TWQP W VRT V ALR  M T+A  +VGGIEC    RR +A+ +  ++C  CG   +   G+I ED  +L  E+   +K         V G
Sbjct:   25 NPAEDYHAAPLDENLFEWHFTLRGPPGTPYAEGIYHGRITLPPDYPLRPPSFRFMTPSGRFEVNREICLSISGHHEDTWQPAWGVRTAVVALRGFMETEAKGQVGGIECDEETRRGIAKEAGEWRCGACGGRSN---GEILEDCRVLAEEMGRGKKAGEEEEERRVEG 189          
The following BLAST results are available for this feature:
BLAST of NO07G01230 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27260.17.700e-9263.99ubiquitin-conjugating enzyme e2 j1 [Nannochloropsi... [more]
CBN79943.11.900e-3739.00similar to ubiquitin-conjugating enzyme E2, J1 (pr... [more]
GAX09697.16.700e-3550.98hypothetical protein FisN_19Lh166 [Fistulifera sol... [more]
GAX19587.13.300e-3450.33hypothetical protein FisN_19Hh166 [Fistulifera sol... [more]
XP_002292659.11.300e-3355.47predicted protein, partial [Thalassiosira pseudona... [more]
EJK77027.18.100e-3342.33hypothetical protein THAOC_01168 [Thalassiosira oc... [more]
XP_006007150.11.500e-3143.75PREDICTED: ubiquitin-conjugating enzyme E2 J1 isof... [more]
XP_006007151.11.500e-3143.75PREDICTED: ubiquitin-conjugating enzyme E2 J1 isof... [more]
XP_002184772.11.500e-3137.71predicted protein [Phaeodactylum tricornutum CCAP ... [more]
CUS15508.11.500e-3144.05unnamed protein product [Tuber aestivum][more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01230.1NO07G01230.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580391gene_2444Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01230.1NO07G01230.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01230 ID=NO07G01230|Name=NO07G01230|organism=Nannochloropsis oceanica|type=gene|length=2349bp
CAGGCAGGAGAATGCCAAATCTCTAAGATTTCTACCTCTATCCTTAGTAC
CTGCGCTGCGGGCGCCTGGTCAGAGTGCCTCTCTTTCCTCCCAGGATCAT
GATTGACCTCCTCCCCCTCCGCCGTCCCCGCCTACTCCGCCTCTTTTCAT
GTGCACTACCGGTCCTTTTCCTCCTCCTCCCTTCCGCTGCAACTGTATCG
ATTAACCGAGGTGGCAAAAGTTCCTCTTGTCTCCCGCGGTCCCTTGACTT
GTCCGTCAAACGACTGATGAAAGAGTGGCGCGTTGTTATGGCCGAAGGCC
TCGTGCTCCTCAATCAGGGCGGAGGCAATTGCAGTCTCACCAACAACACC
GAGCACATTCGACTGGCGCCTTGCCGTGGAAACCTGCATGAGTGGCATTT
CTCGATTGCTGGACCACCCGGGAGTGTGTTTGAAGGAGGGATTTACCATG
GCCGTGTGCTCTTGCCCGCCGACTACCCTTCCTCTGCCCCGCGTTTACAG
ATGCTCAATCCGAGCGGTCGCTTCGAGGTAGGCGCAGACATTTGTTTATC
GGCAACGGCTTTTCATCAGGAGACCTGGCAGCCGGTATGGACGGTCAGGA
CGTTGGTAAGTGCGTTAAGGAGTCACATGACGACCAAGGCTTTGGAGGTA
GGTGGGATTGAGTGCTCGGCGCGCCGACGACGGTTGCTGGCGCAGCGATC
AAGAAGGTTTCAGTGTCGGGGATGTGGAGTGGATCATTCGGGCTTTCCTG
GGAAGATTTTTGAGGATCTGCCGATGTTGGTAGCGGAGGTTGAGGTGGAG
GAGAAGGTGACTGCGTCGACCTCTTCGTCGGCGGTGACGGGAAATGGAAA
GGAGGAGGGAACAGCACGGAGGAGAAGAATAGGGAAAATAGAAGGAAGAA
GAGGAGGTGATCGTGTGGCGATGACCGAAAAGGGATATGATGCCTGCTTC
GTGTCTTTATTTGACCGGTATAAATTGCCGTTGGTGCTGGGCATTGCGTT
CCTGCTGGCATTCCTCTGGCTGAATGTGTCCTCCGGTTATTGATGAAGAA
AAGAAAATACGATTGTCTCAGTCATGTCGTATCTCTTCCATTATCCTCTC
CTCCTTCTGACTTGACCTCAGGGCAGAAACGGGGCGCTTGAATCCTCCCG
TCCTCTAGTTGGCCGCCGTGACGACGCCGGTATCTCGACAAAGCAAAATT
GAGGAATGTAACCGATATTCGCGAATCAAAGTAAATCAATCTCCATCGAT
GCCAGCACTTATCGTACAGATTTGATTTAATGTGGACAGTTCGTCCAGAT
TCTTTTTCTTCTTTTCAGTGTTTCTTGTGTGTTATTACCCTTCTCAAGGA
AAACTCGCTGTATTGCTGCAGGCACCGTAGCCCTCGAATTTCTGGGGGGC
GGACTGGCGTGGGTTTTCTCTATCTTTTTTATTTTTTGTTTTCTATTTTT
AGTTATGGTCGTCGATTGCTCTTCTCTGTTGTTACCGTGGTACGTGCTAA
CTTCTGCTCGCTGATTTTTGGGTGTTTCTAAATTGAATCTTATTGGTTTT
TTTTTTGGGTTTTCATATCGACCTCTGATTCTGTTTTTGTTGTCCTATGG
AACTACATCTGTTACTTGTGTATTTCTTCTCAGTGTATTGATAGGCATGA
TCATCGTTCTTGTCGTCGTCTTCTTGCTTCGAGGGTTTCCCCCAGCACCC
TCTGCTTCACGCGATGAGTGCCACGTGCATGCTCATTCGTCATATTTCCC
GTTCCCAAACGAACGCCTCTTCCTACTTGTCCTGATACGTCATCCCCTCT
TTGATCTCTTCCTTCACACTACTCGTACATCAGAAAGACAGGCTTCATCG
TTCTCGCGCTGATGCTGCCGCTGACTATTGGTCTCTATCTACCAATGGCA
TATAGAATCGAAAGCACGAATCAAGCGTAGAAATTTATCATATATGTAGA
TGCCTTATTTATTCGTCACTCGATCGCTATGTAGATAGGTGGGTAATAGA
TCTAAATCATAGATGGGCGGGCAATAGATTTTCGATATAAATAAATAAAT
CATCTTTTACTCTCTCATTCTCTCTCCCTCTCTCTATCTCATTTCCTCTC
TCTCATACACGTGTCTTCTTGTCCATGTACTCGTTCGATTAATCATGCGC
TCGTTTGCACATGCAGCGCCAGCATCGTTGCCGTCACTCCTGGTTGGTTT
CATACATCATTTCTACTTTCACTCTCCCAATCGATGTTTTTTCTCAGTTG
TCATCAGACTGATGGACAGGCAGGGACATTAGATCACTCTTTTCCCTCGC
TCGTACCTACCGATACACACAAGCGCGGACATTCACTCACTCGGACATT
back to top

protein sequence of NO07G01230.1

>NO07G01230.1-protein ID=NO07G01230.1-protein|Name=NO07G01230.1|organism=Nannochloropsis oceanica|type=polypeptide|length=315bp
MIDLLPLRRPRLLRLFSCALPVLFLLLPSAATVSINRGGKSSSCLPRSLD
LSVKRLMKEWRVVMAEGLVLLNQGGGNCSLTNNTEHIRLAPCRGNLHEWH
FSIAGPPGSVFEGGIYHGRVLLPADYPSSAPRLQMLNPSGRFEVGADICL
SATAFHQETWQPVWTVRTLVSALRSHMTTKALEVGGIECSARRRRLLAQR
SRRFQCRGCGVDHSGFPGKIFEDLPMLVAEVEVEEKVTASTSSSAVTGNG
KEEGTARRRRIGKIEGRRGGDRVAMTEKGYDACFVSLFDRYKLPLVLGIA
FLLAFLWLNVSSGY*
back to top
Synonyms
Publications