NO07G01090, NO07G01090 (gene) Nannochloropsis oceanica

Overview
NameNO07G01090
Unique NameNO07G01090
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4521
Alignment locationchr7:355587..360107 -

Link to JBrowse

Properties
Property NameValue
DescriptionDead-box atp-dependent rna helicase
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:355587..360107 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0016787hydrolase activity
GO:0003676nucleic acid binding
GO:0000166nucleotide binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
Homology
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_009825293.1 (hypothetical protein H257_03074 [Aphanomyces astaci] >ETV85275.1 hypothetical protein H257_03074 [Aphanomyces astaci])

HSP 1 Score: 553.1 bits (1424), Expect = 9.800e-154
Identity = 268/394 (68.02%), Postives = 320/394 (81.22%), Query Frame = 0
Query:  167 AVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNMGGGG 561
            +V G G+PK V TFEEAS P+YVL EV++ GF APTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVLV+APTRELA+QIKQECDKFG SS IKNTCVYGGVPKR Q+ DL RG+EI + TPGR+ID L    TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSL+L+ANK+I Q V V  D DKYG L   L++    GR+++F ETKRG D+L  +L    +   AIHG+KSQ++RDW L++FKEG++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG A+S+ TQ ++RI++++ +IL E+G  VP  L +M G G
Sbjct:  113 SVNGKGVPKHVETFEEASFPQYVLDEVVRLGFAAPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLVIAPTRELAVQIKQECDKFGSSSKIKNTCVYGGVPKRGQIEDLSRGVEICICTPGRMIDLLNINKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVALAHDFLNDFIQVTVGSLELTANKNITQVVKVMGDMDKYGALTDLLRDVYDDGRIIIFCETKRGADELCNNLKRTRYATRAIHGNKSQEERDWVLKEFKEGKAQILVATDVASRGLDIKDIRFVINFDMPKNIEDYIHRIGRTARAGMKGTAVSYFTQDNSRIAQDMIRILMEAGQEVPRELESMRGYG 506          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_012194579.1 (hypothetical protein SPRG_00984 [Saprolegnia parasitica CBS 223.65] >KDO34922.1 hypothetical protein SPRG_00984 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 552.7 bits (1423), Expect = 1.300e-153
Identity = 269/394 (68.27%), Postives = 319/394 (80.96%), Query Frame = 0
Query:  170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALR---NMGGGG 561
            G G+PK V +FEEAS P+YVL EV++ GF APTPIQSQGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVLV+APTRELA+QI+QEC+KFG SS IKNTCVYGGVPKR+Q  DL RG+EI + TPGR+ID L    TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSL+L+ANK+I Q V V  D +KYG L   LK+   GG+++VF ETKRG D+L R+L    F   AIHGDKSQ++RDW L++FK G++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG A+S+VT  + ++ ++L KIL E+G  VP  L    + GGGG
Sbjct:  131 GKGVPKQVMSFEEASFPQYVLDEVVRLGFPAPTPIQSQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLVIAPTRELAVQIQQECNKFGASSKIKNTCVYGGVPKRQQCDDLARGVEICICTPGRMIDLLGQNKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVTLAHDFLHDFIQVTVGSLELTANKNITQIVKVMSDHEKYGALSDLLKDIADGGKIIVFCETKRGADELTRNLRATRFVTRAIHGDKSQEERDWVLKEFKAGKAQILVATDVASRGLDIKDIRYVINFDMPKNIEDYIHRIGRTARAGQKGTAVSYVTADNGKMVQDLIKILREAGQEVPRELEGISSFGGGG 524          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: GAX96569.1 (putative RNA helicase [Pythium insidiosum])

HSP 1 Score: 552.7 bits (1423), Expect = 1.300e-153
Identity = 269/391 (68.80%), Postives = 316/391 (80.82%), Query Frame = 0
Query:  168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNMGG 559
            V G  +PK V TFEEAS P+YVL+EV + GF  PTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVL++APTRELA+QI+QEC+KFG SS IKNTC+YGGVPK  Q+ DLRRG+EI + TPGR+ID L  G TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKEV S+A DFL D  QVTVGSLDL+ANK IKQ V V +D  KY  L+  LK+   GGR++VF ETKRG D+L R+L    +   AIHG+KSQ++RDWTL++FKEGR+ ILVATDVA+RGLD+KD++ V NFD P N+EDYIHR+GRT RAG KG AISF + +++R++  L KIL E+   VP  L  M G
Sbjct:  717 VMGKNVPKCVQTFEEASFPDYVLEEVNRLGFTKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLIIAPTRELAVQIQQECNKFGASSKIKNTCIYGGVPKGPQIADLRRGVEICICTPGRMIDMLSMGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEVVSLAHDFLTDFIQVTVGSLDLTANKRIKQIVEVMDDYSKYNALVNHLKDIYEGGRIIVFCETKRGADELSRNLRNTRYMCKAIHGNKSQEERDWTLKEFKEGRTQILVATDVASRGLDIKDVRYVINFDMPKNIEDYIHRIGRTARAGQKGTAISFFSNENSRLAGPLVKILREADQEVPRDLEAMAG 1107          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: OQS00472.1 (RNA helicase (Dbp) [Achlya hypogyna])

HSP 1 Score: 550.4 bits (1417), Expect = 6.400e-153
Identity = 266/395 (67.34%), Postives = 321/395 (81.27%), Query Frame = 0
Query:  170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNM--GGGGYG 563
            G G+PK V +FEEAS P+YVL EV++ GF +PTPIQSQGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVLV+APTRELA+QI+QEC+KFG SS IKNTCVYGGVPKR+Q  DL RG+EI + TPGR+ID L    TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSL+L+ANK+I Q V V  D  KYG L+  LK+   GG+++VF ETKRG D+L R+L    +   AIHG+KSQ++RDW L++FK+G++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG AIS+VT  + ++ ++L +IL E+G  VP  L ++    GGYG
Sbjct:  118 GKGVPKQVMSFEEASFPQYVLDEVVRLGFPSPTPIQSQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLVIAPTRELAVQIQQECNKFGASSKIKNTCVYGGVPKRQQCEDLARGVEICICTPGRMIDMLGQNKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVTLAHDFLHDFIQVTVGSLELTANKNITQVVKVMSDHQKYGHLVDLLKDIADGGKIIVFCETKRGADELSRNLRDTRYVTRAIHGNKSQEERDWVLKEFKDGKAQILVATDVASRGLDIKDIRYVINFDMPKNIEDYIHRIGRTARAGQKGTAISYVTADNGKLVKDLVRILSEAGQEVPRELGDLSYSSGGYG 512          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_005650016.1 (DEAD-box RNA helicase [Coccomyxa subellipsoidea C-169] >EIE25472.1 DEAD-box RNA helicase [Coccomyxa subellipsoidea C-169])

HSP 1 Score: 549.3 bits (1414), Expect = 1.400e-152
Identity = 264/385 (68.57%), Postives = 310/385 (80.52%), Query Frame = 0
Query:  170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALR 555
            GH IPKPV TFEEAS PEYVL EV   GF  PTPIQ+QGWPMALLGRD++G++ TGSGKTLA+LLPA++HINAQPYLE GDGPIVLVLAPTRELA+QI+QEC KFG SS IKNTCVYGG PK  Q+ DLR G+EIV+ATPGRLID LES +TNLRRVTYLVLDEADRMLDMGFEPQ+R+IVSQIRPDRQTL+WSATWPK+VQS+A  FL+D YQVT+GS DL AN  I Q      + DKY  L R L+    G R+L+F ETKRGCD + R L  +G+ A++IHGDKSQQ+RDW L +FK G+S I++ATDVAARGLDVKDI+MV N+D PN  EDY+HR+GRT RAGA G A+SF T  + R++R++  IL E+   VP  LR
Sbjct:   35 GHDIPKPVTTFEEASFPEYVLTEVKHAGFTQPTPIQAQGWPMALLGRDLVGLAETGSGKTLAYLLPAIVHINAQPYLEPGDGPIVLVLAPTRELAVQIQQECAKFGTSSRIKNTCVYGGAPKGPQMRDLRNGVEIVIATPGRLIDMLESRVTNLRRVTYLVLDEADRMLDMGFEPQIRNIVSQIRPDRQTLLWSATWPKDVQSIASAFLRDFYQVTIGSRDLKANHLIDQHFQFLSEDDKYRALSRLLEREMDGSRLLIFCETKRGCDAVTRQLRTEGWPALSIHGDKSQQERDWVLAEFKAGKSPIMLATDVAARGLDVKDIKMVVNYDMPNTAEDYVHRIGRTARAGASGLAVSFFTSANGRMARQIVDILSEAHQTVPDQLR 419          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_008605058.1 (hypothetical protein SDRG_01318 [Saprolegnia diclina VS20] >EQC41344.1 hypothetical protein SDRG_01318 [Saprolegnia diclina VS20])

HSP 1 Score: 548.5 bits (1412), Expect = 2.400e-152
Identity = 267/394 (67.77%), Postives = 319/394 (80.96%), Query Frame = 0
Query:  170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNM---GGGG 561
            G G+PK V +FEEAS P+YVL EV++ GF APT IQSQGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVLV+APTRELA+QI+QEC+KFG SS IKNTCVYGGVPKR+Q  DL RG+EI + TPGR+ID L    TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSL+L+ANK+I Q V V  D +KYG L   LK+   GG+++VF ETKRG D+L R+L    +   AIHGDKSQ++RDW L++FK G++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG A+S+VT ++ ++ ++L KIL E+G  VP  L  +   GGGG
Sbjct:  126 GKGVPKQVMSFEEASFPQYVLDEVVRLGFPAPTAIQSQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLVIAPTRELAVQIQQECNKFGASSKIKNTCVYGGVPKRQQCDDLARGVEICICTPGRMIDLLGQNKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVTLAHDFLHDFIQVTVGSLELTANKNITQIVKVMADHEKYGALSDLLKDIADGGKIIVFCETKRGADELTRNLRNTRYVTRAIHGDKSQEERDWVLKEFKAGKAQILVATDVASRGLDIKDIRYVINFDMPKNIEDYIHRIGRTARAGQKGTAVSYVTAENGKMVQDLIKILSEAGQEVPRELEGISSYGGGG 519          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_024574948.1 (rna helicase [Plasmopara halstedii] >CEG38579.1 rna helicase [Plasmopara halstedii])

HSP 1 Score: 546.2 bits (1406), Expect = 1.200e-151
Identity = 266/390 (68.21%), Postives = 316/390 (81.03%), Query Frame = 0
Query:  168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVT-QKHARISRELSKILEESGNVVPAALRNM 557
            V G G+PK V +FEEAS PEYVL+EV++ GFD PTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVL++APTRELA+QI+ EC+KFG SS IKNTCVYGGVPK  Q+ DLRRG+EI + TPGR+ID L  G TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSLDL+ANK IKQ V V +D  KY  L   L++   GGR+++F ETKRG D+L R+L    +   AIHG+KSQ++RD+ LR FKEG++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG +ISF T   + R++  L KILE++G  VP  LR++
Sbjct:  122 VTGKGVPKCVLSFEEASFPEYVLEEVVRLGFDKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLIIAPTRELAVQIQAECNKFGASSKIKNTCVYGGVPKGGQIADLRRGVEICICTPGRMIDMLSMGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVALANDFLTDFIQVTVGSLDLTANKRIKQIVEVMDDHQKYASLQDHLRDIYEGGRIIIFCETKRGADELSRNLRNTRYMCKAIHGNKSQEERDYVLRDFKEGKTQILVATDVASRGLDIKDIRYVVNFDMPKNIEDYIHRIGRTARAGNKGTSISFFTASNNGRLAAPLVKILEDAGQEVPRELRDL 511          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: ETI34111.1 (hypothetical protein F443_19317 [Phytophthora parasitica P1569] >ETK74478.1 hypothetical protein L915_18741 [Phytophthora parasitica] >ETL81147.1 hypothetical protein L917_18468 [Phytophthora parasitica] >ETM34348.1 hypothetical protein L914_18556 [Phytophthora parasitica] >ETO62920.1 hypothetical protein F444_19268 [Phytophthora parasitica P1976] >ETP04003.1 hypothetical protein F441_19137 [Phytophthora parasitica CJ01A1] >ETP32157.1 hypothetical protein F442_19092 [Phytophthora parasitica P10297])

HSP 1 Score: 544.7 bits (1402), Expect = 3.500e-151
Identity = 267/392 (68.11%), Postives = 317/392 (80.87%), Query Frame = 0
Query:  168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVT-QKHARISRELSKILEESGNVVPAALRNMGG 559
            V G G+PK V +FEEAS PEYVL+EV++ GFD PTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVL++APTRELA+QI+ EC+KFG SS IKNTCVYGGVPK  Q+ DLRRG+EI + TPGR+ID L  G TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSLDL+ANK IKQ V V +D  KY  L   L++   GGR+++F ETKRG D+L R+L    +   AIHG+KSQ++RD+ LR+FKEGR  ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG +ISF T   ++R++  L KI+EE+   VP  LR++ G
Sbjct:  133 VSGKGVPKCVLSFEEASFPEYVLEEVVRLGFDKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLIIAPTRELAVQIQAECNKFGASSKIKNTCVYGGVPKGGQIADLRRGVEICICTPGRMIDMLSMGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVALANDFLTDFIQVTVGSLDLTANKRIKQIVEVMDDHQKYNALQDHLRDIYEGGRIIIFCETKRGADELSRNLRNTRYMCKAIHGNKSQEERDYVLREFKEGRIQILVATDVASRGLDIKDIRYVVNFDMPKNIEDYIHRIGRTARAGNKGTSISFFTASNNSRLAGPLVKIMEEAEQEVPRELRDLVG 524          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: XP_008897207.1 (hypothetical protein PPTG_05414 [Phytophthora parasitica INRA-310] >ETL27903.1 hypothetical protein L916_18643 [Phytophthora parasitica] >ETN17668.1 hypothetical protein PPTG_05414 [Phytophthora parasitica INRA-310])

HSP 1 Score: 544.7 bits (1402), Expect = 3.500e-151
Identity = 267/392 (68.11%), Postives = 317/392 (80.87%), Query Frame = 0
Query:  168 VWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVT-QKHARISRELSKILEESGNVVPAALRNMGG 559
            V G G+PK V +FEEAS PEYVL+EV++ GFD PTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQPYL+ GDGPIVL++APTRELA+QI+ EC+KFG SS IKNTCVYGGVPK  Q+ DLRRG+EI + TPGR+ID L  G TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ ++A DFL D  QVTVGSLDL+ANK IKQ V V +D  KY  L   L++   GGR+++F ETKRG D+L R+L    +   AIHG+KSQ++RD+ LR+FKEGR  ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG KG +ISF T   ++R++  L KI+EE+   VP  LR++ G
Sbjct:  133 VSGKGVPKCVLSFEEASFPEYVLEEVVRLGFDKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPYLQPGDGPIVLIIAPTRELAVQIQAECNKFGASSKIKNTCVYGGVPKGGQIADLRRGVEICICTPGRMIDMLSMGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVALANDFLTDFIQVTVGSLDLTANKRIKQIVEVMDDHQKYNALQDHLRDIYEGGRIIIFCETKRGADELSRNLRNTRYMCKAIHGNKSQEERDYVLREFKEGRIQILVATDVASRGLDIKDIRYVVNFDMPKNIEDYIHRIGRTARAGNKGTSISFFTASNNSRLAGPLVKIMEEAEQEVPRELRDLVG 524          
BLAST of NO07G01090 vs. NCBI_GenBank
Match: CCI40551.1 (unnamed protein product [Albugo candida])

HSP 1 Score: 544.7 bits (1402), Expect = 3.500e-151
Identity = 262/391 (67.01%), Postives = 319/391 (81.59%), Query Frame = 0
Query:  170 GHGIPKPVFTFEEASMPEYVLQEVMKQGFDAPTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGDGPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRRGMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIVSQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQEVMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQAVAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDFPNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVPAALRNMGGGG 561
            G  IP+ V+TFEEAS P YVL+EVM+ GF  PTPIQ QGWPMAL GRDM+GISATGSGKTLAFLLPA++HINAQP+L+ GDGPIVL++APTRELA+QI+QE +KFG SS IKNTCVYGGVPK  Q+ +LR+G+EI + TPGR+ID L  G TNLRRVTYLVLDEADRMLDMGFEPQLR IVSQIRPDRQTLMWSATWPKE+ S+A DFL D  QVTVGSL+L+ANK I+Q V V +D  KY  L+  L+E   GGR+++F ETKRG D+L R+L    +   AIHG+KSQ++RD+ L++FK+G++ ILVATDVA+RGLD+KDI+ V NFD P N+EDYIHR+GRT RAG+KG AISF T  + R++  L ++LEE+   VPAALR++ G G
Sbjct:  138 GKNIPRCVYTFEEASFPAYVLEEVMRLGFQKPTPIQCQGWPMALSGRDMVGISATGSGKTLAFLLPAIVHINAQPHLQPGDGPIVLIIAPTRELAVQIQQEANKFGASSKIKNTCVYGGVPKYNQIMELRQGVEICICTPGRMIDLLSQGKTNLRRVTYLVLDEADRMLDMGFEPQLRKIVSQIRPDRQTLMWSATWPKEIVSLAHDFLTDYIQVTVGSLELTANKKIEQIVEVMDDYQKYNALVNHLREIYDGGRIILFCETKRGADELSRNLRNSRYICKAIHGNKSQEERDYVLKEFKQGKTQILVATDVASRGLDIKDIRYVINFDMPKNVEDYIHRIGRTARAGSKGTAISFFTSDNGRLASPLIRVLEEANQQVPAALRSLIGSG 528          
The following BLAST results are available for this feature:
BLAST of NO07G01090 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
XP_009825293.19.800e-15468.02hypothetical protein H257_03074 [Aphanomyces astac... [more]
XP_012194579.11.300e-15368.27hypothetical protein SPRG_00984 [Saprolegnia paras... [more]
GAX96569.11.300e-15368.80putative RNA helicase [Pythium insidiosum][more]
OQS00472.16.400e-15367.34RNA helicase (Dbp) [Achlya hypogyna][more]
XP_005650016.11.400e-15268.57DEAD-box RNA helicase [Coccomyxa subellipsoidea C-... [more]
XP_008605058.12.400e-15267.77hypothetical protein SDRG_01318 [Saprolegnia dicli... [more]
XP_024574948.11.200e-15168.21rna helicase [Plasmopara halstedii] >CEG38579.1 rn... [more]
ETI34111.13.500e-15168.11hypothetical protein F443_19317 [Phytophthora para... [more]
XP_008897207.13.500e-15168.11hypothetical protein PPTG_05414 [Phytophthora para... [more]
CCI40551.13.500e-15167.01unnamed protein product [Albugo candida][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
nonsL099nonsL099Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000765NSK000765Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G01090.1NO07G01090.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580331gene_2427Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100038g3gene3285Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G01090.1NO07G01090.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G01090 ID=NO07G01090|Name=NO07G01090|organism=Nannochloropsis oceanica|type=gene|length=4521bp
ATGATTAAGGCGCCATCGGGATCATCCTTACGACTGGACGTGGCGGAAAG
CAACCATCTCTGTGCGAATGAGAATCAGGAGCCACGCGTGTTCTGCCACC
AGAGCAAGTGGCGCCACACATGTCTCGACTCATCCTTAAGCAGCTTATTT
TACCGACGGCGTCACATTGTGACCTCCATGTCGTCCTCGCCCAGCCTGGC
CTCCTCCTACCCCATCGACCATCGATCCTGTGTCCCACGTCGTCCTCATT
CCCATTCCTCCGCCCCCTCCTCGCCACGAATCACAGAAACTTACATCAAG
CGAATCCAAGCGAAACCAGTATGTCTTACGGCTCTTACGGCGGCGGCGGT
GGATCTCGGGGTGGTGGCGGgtacgtccaatgtcttgactttctttccct
cccattcgcagggttcttcgattccatggcccactcattttcctaaacac
gccctttttgttccccacacgcatatgcgtatgcacttgtgtcctcattc
ctttccgtttactcattagcaatgacggtggcagatgcatgggcggattt
gaattctgtatgtctatcacgatggtctctcgcggcatcacataaaccct
ctccaaacctcaaatctcatccaccctttcactttctctttacgcgcacg
tgtgacctttgctcattctctttctcttccttccagCTACGGCGGCGGCG
GCAGgtacgtttcattgcacttatctatctacctagctcaaggtagttgt
atgcgtgctcgtgtgccagcccgactgcctaccccaatcttgtatgcgtg
ctcgtgtgccagcccgactgcctaccccaatcttcttcctttgatcaacg
tcctcacctcccctcttccacgcgcacacacgctttgaatatgatcggca
tgccttttctcctctctctcacacattagCTATGGTGGTGGCGGCAGTGG
TTACGGCAGgtatggtgcgctctttcgcgtgtcttattgtgcttgtgcct
gtatgtgcattcatccgtgtcactgacaggaatcaaactacgtattgtat
gtgtcacctcacacaattttcttttcatcccacacacaacgccatatttc
aactctcattttcctctcctacactcgccctcatattcccttctctcttc
cttacgaaatcaatagCTACGGCGGGGGCGGCGGGGGCGGCTACGGTGGT
GGCGGCGGCGGCTTTGGTGGCGGCCGTGGGGGTGGTGATCGTATGGGCGG
TCTGGgtgcgggtctgagaagcatacactgggacctgaataaactccctc
ccttcgagaaaaacttttacatcgagcaccccgacgtgacgaaacgagag
gagaccgaggcggcacgctggaggacgaagcatggcattaccgtgcagGG
GCATGGGATCCCTAAGCCTGTGTTTACATTTGAAGAGGCGTCCATGCCCG
AATACGTGCTGCAGGAGGTTATGAAGCAGGGATTTGACGCGCCCACCCCT
ATCCAGAGCCAAGGATGGCCCATGGCGTTGTTGGGCCGGGACATGATTGG
GATCTCGGCGACAGGGTCGGGGAAGACATTGGCGTTCTTGCTGCCGGCCA
TGATTCACATTAATGCTCAGgtgcacattttttctttttctacatttgat
tttgaggaatacagtaatattaggtgtaggagtagtaggaaatgtagtgt
tactaagggcagaagaattacgtggtcgggagggggaggtggaggaggaa
gaggttagtggtttgagagttcggggggagagatacacgcgcgtgtgtat
gatgactggaaggcaagtcgttctctcattagggcacgcctctctctacc
cttccccttttgctggataagaagggagggacgggataccgcacgcggga
gaagcagtgcgaccgaaagcacgcgcattttaaaacgagaggcctcttcg
gtgaatccttccctctttttttactctctttgtgcatgagggctaaggga
aggacaggctcacacaaaaagcaggcacacgtcgtgggacaggagagagg
atcgaattgtggggggaacatgaggccaacggtaggggatggggttgggt
tggaaacttcctccctttcctctctcttccctatcatctcttttcctcct
ctccttccttcagggcagagccactgaaaatgaaattgaaggctctgtct
aggtcaaaggctggggcggcggcgacgcccacagcgccgcctccgccgct
tcctcctcctcttgttgttggagcccttgctgcgggtgccgttggcgaaa
gctggtggccacaagcattggcgtggctatctatcgcttcctccacatgc
aacccaagccacagaaacgccaatcatggtcatccttgtcctcttcctca
tcctgctctcctctctcacacagtacgtaccgcgtgattctgctcgttgc
tcgtccttttcttttcgttgttgaataatttgtctcttctcttcctccct
gtctctttcttgaagggcgggagaataaagaaaagacattgaaaaaatga
caaaaaggaaggataaaagacgaaaagttcacaccaacggtacaagctcc
gaaagagaaagatgagcttttaaggcgctggaaagagacgacgaaggagg
atgttgtggtgtttgggcctttcgtattttgaattggaatcgaagcgatg
cgcacgaatgatattcaaaggaagaatagaacctgtcgtcactcacagtg
tggtgaatgtatggcagtgacggtgctgacgcgcatatccatgtgttagt
gtgtgaggccacgagatgcattccctatgatcatttcgggaatgacatgc
gagacatgtgggcgtgtctaggatgtgcgtgaatgtggatagttaaataa
taaaggctttatatataagtgtgtgtgtgggtgtgtgcatatgtgtgtgt
gtatgtatgtgtgtgtatatgtgtgtatgtatgtatacatatatgtgtgt
gtgcaagtgctttggtcttcgctttgtgcgacaaaggatggcattatccc
tattaaccctaaccttaaccctatatctatatacgtatgtacctcgcttt
tcttcggatcttaagtctttttttccctctgcctccatcaaatacttctt
tacccccctccctccttcccgtgcgccgtcgaatcacctgacgacttact
cattgtcatcccctaccctcactgcgttaatatgatgggaaacgaaggta
cagaatcttgatacttttctaccgaatcttctcaactctctctccctccc
ttcttccctccctccctacccccgcttcccccagCCTTACCTTGAACAAG
GGGATGGACCCATCGTCCTCGTCCTGGCCCCGACCCGCGAGCTCGCCCTG
CAGATCAAGCAGGAATGTGACAAATTTGGAAGGAGTTCGTCGATCAAAAA
TACGTGTGTCTACGGTGGAGTGCCCAAGCGGGAGCAGGTCTATGATTTAC
GCCGGGGGATGGAGATCGTGGTGGCGACGCCGGGGCGATTGATCGACCAT
TTGGAATCAGgtaagctattgattcggcttttacctgcatccattcgcct
ccataaatcctcatcattccttaattcacggttccctcttctgaaagGCA
TGACCAACCTGCGCAGGGTCACCTACTTGGTGCTGGACGAGGCGGACCGG
ATGCTCGACATGGGTTTCGAACCCCAGCTTCGTTCCATCGTCTCCCAGAT
CCGCCCCGACCGACAAACACTCATGTGgtgagctacgccccatctccccc
tatccctctcctgcctaacctctccagccccagctatcttcatttcaccc
ttacctctcttctctcgtcccccctctctttttacctcccttcttcgcac
cctagGTCCGCCACCTGGCCCAAGGAAGTGCAGAGCATGGCCCGCGACTT
CCTCAAGGACCCTTATCAGGTGACCGTCGGCTCGCTGGACCTGAGTGCCA
ACAAAGACATCAAGCAAGAGGTGATGGTGTGTGAGGACCGGGACAAGTAC
GGCTTGCTGTTGCGGGCGCTCAAGGAGAACAATACGGGAGGCCGTATGCT
TGTATTCGTGGAGACCAAGCGCGGATGTGATCAGCTACAGCGTTCTTTGT
CGATGGACGGCTTCCAGGCGGTGGCGATCCACGGAGACAAAAGTCAGCAG
GACCGTGATTGGACACTCAGACAGTTTAAGGAAGGAAGGAGTAACATCCT
GGTGGCGACGGACGTAGCGGCCCGTGGGTTGGACGTGAAGGACATTCAGA
TGGTGGCCAATTTTGATTTCCCGAACAATATGGAGGATTATATTCATCGG
GTGGGGCGGACGGGGAGGGCGGGGGCGAAGGGGTATGCGATTTCGTTTGT
CACGCAAAAACATGCTCGGATCTCGCGGGAGTTGAGCAAGATTTTGGAGG
AGAGTGGCAATGTTGTCCCTGCGGCATTAAGGAACATGGGTGGAGGGGGA
TACGGTCGTGGGCGCTACTAA
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protein sequence of NO07G01090.1

>NO07G01090.1-protein ID=NO07G01090.1-protein|Name=NO07G01090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=567bp
MIKAPSGSSLRLDVAESNHLCANENQEPRVFCHQSKWRHTCLDSSLSSLF
YRRRHIVTSMSSSPSLASSYPIDHRSCVPRRPHSHSSAPSSPRITETYIK
RIQAKPVCLTALTAAAVDLGVVAATAAAAAMVVAAVVTAATAGAAGAATV
VAAAALVAAVGVVIVWAVWGHGIPKPVFTFEEASMPEYVLQEVMKQGFDA
PTPIQSQGWPMALLGRDMIGISATGSGKTLAFLLPAMIHINAQPYLEQGD
GPIVLVLAPTRELALQIKQECDKFGRSSSIKNTCVYGGVPKREQVYDLRR
GMEIVVATPGRLIDHLESGMTNLRRVTYLVLDEADRMLDMGFEPQLRSIV
SQIRPDRQTLMWSATWPKEVQSMARDFLKDPYQVTVGSLDLSANKDIKQE
VMVCEDRDKYGLLLRALKENNTGGRMLVFVETKRGCDQLQRSLSMDGFQA
VAIHGDKSQQDRDWTLRQFKEGRSNILVATDVAARGLDVKDIQMVANFDF
PNNMEDYIHRVGRTGRAGAKGYAISFVTQKHARISRELSKILEESGNVVP
AALRNMGGGGYGRGRY*
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Synonyms
Publications