NO07G00890, NO07G00890 (gene) Nannochloropsis oceanica
|
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OWZ66312.1 (hypothetical protein AYX14_05986 [Cryptococcus neoformans var. grubii]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OWZ80331.1 (transmembrane protein [Cryptococcus neoformans var. grubii Bt85] >OXG12330.1 transmembrane protein [Cryptococcus neoformans var. grubii Tu401-1]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OXC64580.1 (hypothetical protein AYX13_06108 [Cryptococcus neoformans var. grubii]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OXG25935.1 (transmembrane protein [Cryptococcus neoformans var. grubii Tu259-1] >OXG45156.1 transmembrane protein [Cryptococcus neoformans var. grubii Th84] >OXG74709.1 transmembrane protein [Cryptococcus neoformans var. grubii Br795] >OXH23954.1 transmembrane protein [Cryptococcus neoformans var. grubii] >OXH43995.1 transmembrane protein [Cryptococcus neoformans var. grubii] >OXH44515.1 transmembrane protein [Cryptococcus neoformans var. grubii] >OXH46174.1 transmembrane protein [Cryptococcus neoformans var. grubii] >OXH64596.1 transmembrane protein [Cryptococcus neoformans var. grubii] >OXH64795.1 transmembrane protein [Cryptococcus neoformans var. grubii]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OXG52267.1 (transmembrane protein [Cryptococcus neoformans var. grubii CHC193]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OXH02204.1 (transmembrane protein [Cryptococcus neoformans var. grubii]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OXM76350.1 (transmembrane protein [Cryptococcus neoformans var. grubii Bt63]) HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_024512424.1 (transmembrane protein, putative [Cryptococcus neoformans var. neoformans JEC21] >AAW42308.2 transmembrane protein, putative [Cryptococcus neoformans var. neoformans JEC21]) HSP 1 Score: 109.0 bits (271), Expect = 7.800e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDAALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDVVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OWT41202.1 (transmembrane protein [Cryptococcus neoformans var. grubii Bt1]) HSP 1 Score: 109.0 bits (271), Expect = 7.800e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDAALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OXG14213.1 (transmembrane protein [Cryptococcus neoformans var. grubii Ze90-1]) HSP 1 Score: 109.0 bits (271), Expect = 7.800e-20 Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query: 145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
R R+ + D R + R++ E E+A+W+N L R W +EP+LS + + L V P GV + + FTLG K+P + R K PED ++M + F DL K+V+ + G +P+ ++D G+MR ++ L+ +PH+ T +F+E P ++ + P +G + +P LA ++ Q+ + + P T +L + S T + A G++ VTVL+AR
Sbjct: 228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDAALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477 The following BLAST results are available for this feature:
BLAST of NO07G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00890 ID=NO07G00890|Name=NO07G00890|organism=Nannochloropsis oceanica|type=gene|length=6505bpback to top protein sequence of NO07G00890.1 >NO07G00890.1-protein ID=NO07G00890.1-protein|Name=NO07G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=909bpback to top Synonyms
Publications
|