NO07G00890, NO07G00890 (gene) Nannochloropsis oceanica

Overview
NameNO07G00890
Unique NameNO07G00890
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6505
Alignment locationchr7:290485..296989 -

Link to JBrowse

Properties
Property NameValue
DescriptionTransmembrane protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:290485..296989 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008289lipid binding
Vocabulary: INTERPRO
TermDefinition
IPR031468SMP_LBD
IPR000008C2_dom
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
BLAST of NO07G00890 vs. NCBI_GenBank
Match: EWM27283.1 (transmembrane protein [Nannochloropsis gaditana])

HSP 1 Score: 874.4 bits (2258), Expect = 3.100e-250
Identity = 480/792 (60.61%), Postives = 577/792 (72.85%), Query Frame = 0
Query:   25 SGAGLNSTTTQNSPPPTIHLCPEQDNDATSPASPTPQLQPQSTATPAHIYQATNYTAAASPTKKNSSRIRSETGQALLVPALLCGVLGPXXXXXXXXXXXXXXXXXXSIVIVYAVSGLRERLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDLKIVILAKTSYGTIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILPMGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEARLPPHGAAGGSSSKNAQNVVALNGSEYYMKLQLGEEFMVTREVQEDDGAGDKRLDRWLGGGDIR----SPTRANRLSGHAPNIATTGHLTPHLPNRLSRALTAHLNLLSQEPRQPRLLFGDETFAFLVGGNVGAVDTVKLTLKQRRTKTSRTVCSLAVPLEEALDPDAPKEGSRIQVPLLDGQGEGGGQVTLALRYVSLPEVVLEQTQATVIHRVNEHTLSPVDVDAESPGLLKATDHPYAGSLVLIVHKAEELPSTDVHGVRDSYAVVFAGEREVFRTKTVPTKTLAPEWEQSKEFSTFDVRQVKLTLAIYDADRGYGEKEALAAVELDVHELFTAEGHVHSGRRVKHINKHYFRLQKPGAGGSVNMGSARGGYGAGGGGRDLAVPDRGKSRKGGDMEGNRGKSGKSKSYGFLCVSVLFRPLPAIAMAPDFTFRSTI 813
            SG GL +   Q++  P +     QD   T P    PQ   QST + A  Y ATNYTA  S    N  R RSETGQA+LVPA++CG LGP                  S +++YAV GLRERLRR A+++A R A RKR+LQEDETAEWLNIILFRVWQFHEPLLS+ LRQ F +KL+AVRPS VLAFEIPLFTLGKKSP+MSSARIIT+    DSKVPEDRIVMH+ MGFQAP L+IVILAKTSYGTIPIKIKDFYLQGRMRCEMDL+P+YPHI TASFTFLETP+CEFDI PMGVS+MEVPYLAAI+Q+QIV+GINEH+L PAKV FNLIETQSEATS+  ADGIM VT+LE  LP  G   GSS+   +N  +L  S Y +KL +G++ M T+ V+E++GA +   + W  GG +R      T A    G  P +      +P  P+RLS+AL+  LNL  +E RQPRL+FG ETFAFL+GGNVGAVDTV+LTL Q+RT+TSRT+CSL VPLEEAL+P AP  G ++QVPLLDGQ +G G++TL LRY+ LPE+VLEQT  TVIHRVNE TLSPV++DA+S GLLK TDHP+AGSLV+I+HKAEELPS DV GV+D YAVVFAGERE+FRTK  PTKTL+PEWEQS+EFSTFDVR+++L +AI+D  R  GEK A+A  ++D+  LFT E  +H GRR   I+K Y RL +P  G     G        G GG+D    +   +RK  D  G  G   + KS GF+CVS+LFRPLPA A+AP+  F  T+
Sbjct:   33 SGGGLLTGRDQDAGLPGV----PQDEKETFPPYDFPQEHRQSTRSAAAFYNATNYTAGPSAGSDNRLRRRSETGQAILVPAVMCGFLGPLCWVFGRQGWSYSYALWSSTLVIYAVYGLRERLRRAARMEATRIASRKRILQEDETAEWLNIILFRVWQFHEPLLSANLRQDFLQKLDAVRPSRVLAFEIPLFTLGKKSPFMSSARIITKTQFSDSKVPEDRIVMHLTMGFQAPGLEIVILAKTSYGTIPIKIKDFYLQGRMRCEMDLIPKYPHIQTASFTFLETPVCEFDIQPMGVSLMEVPYLAAIVQAQIVHGINEHLLDPAKVVFNLIETQSEATSIEAADGIMLVTLLEVELPQGGRVFGSSAHPKEN-NSLAASAYNVKLHVGDDVMYTKNVREEEGAPE---ESW--GGRMRMLGAPSTTAFNSMGSGPALT-----SPRRPDRLSKALSRRLNLNHREIRQPRLVFGGETFAFLIGGNVGAVDTVQLTLNQKRTQTSRTICSLTVPLEEALNPRAPAGGLQVQVPLLDGQADGRGEITLGLRYMRLPEIVLEQTLPTVIHRVNERTLSPVNMDADSLGLLKDTDHPHAGSLVIILHKAEELPSVDVLGVQDCYAVVFAGEREIFRTKKSPTKTLSPEWEQSREFSTFDVRRIRLKVAIFDTGRNGGEKGAMAEADMDLCSLFTTEEAIHFGRRASRIHKRYLRLHRPSGGSKPCKGH------GGLGGKD--ANELKHTRKTYDAGG--GGQERGKSSGFVCVSLLFRPLPAQAVAPELLFHGTL 799          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_018259792.1 (transmembrane protein [Kwoniella dejecticola CBS 10117] >OBR81950.1 transmembrane protein [Kwoniella dejecticola CBS 10117])

HSP 1 Score: 114.0 bits (284), Expect = 2.400e-21
Identity = 76/258 (29.46%), Postives = 124/258 (48.06%), Query Frame = 0
Query:  145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYGT----IPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILPM-----GVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            R R+ A+ D  R   + R++ E E+AEW+N  L R W  +EP+LS  +  +    L  V P+GV +  +  FTLG K+P +   R          K PED ++M   + F   DL              KIV+  +   G     IPI ++D    G+MR ++ L+  +PHI T   +F+E P  ++ + P+     G  +  +P LA  ++ Q+   +   +  P   T +L +  S  T +  A G++ +TVL+AR
Sbjct:  259 RTRQRARDDIQRELVKTRLVTETESAEWMNSFLERFWLIYEPVLSQTIIASTDAALAGVAPAGVESIRLTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLQDITPRQAAKRVNPKIVLSIRVGKGAVSKGIPILLEDMSFTGKMRIKLKLMTNFPHIQTVDMSFIEKPTFDYVLKPIGGETFGFDINNIPGLAPFIRDQVHANLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRITVLDAR 508          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_019032660.1 (transmembrane protein [Tsuchiyaea wingfieldii CBS 7118] >ODN99583.1 transmembrane protein [Tsuchiyaea wingfieldii CBS 7118])

HSP 1 Score: 109.8 bits (273), Expect = 4.600e-20
Identity = 71/259 (27.41%), Postives = 121/259 (46.72%), Query Frame = 0
Query:  144 ERLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYGTI----PIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            +R R  A+ D  R   + R++ E E+A+W+N  L R W  +EP+LS  +  +    L  V P GV +  +  FTLG K+P +   R          K PED ++M   + F   D+              K+V+  +   G +    PI ++D    G+MR ++ L+  +PH+ T   +F+E P  ++ + P     +G  +  +P LA  ++ Q+   +   +  P   T +L E     T +  A G++ VTV +AR
Sbjct:  224 QRTRDRARDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDAALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWAISFTPNDIQDVTPRQQAKQVNPKVVLSIRVGKGVVSKALPILLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPALAPFIRDQVHANLGPMMYDPNSFTIDL-EQLLSGTPLDAAIGVLRVTVTDAR 474          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_012052464.1 (transmembrane protein [Cryptococcus neoformans var. grubii H99] >XP_012052786.1 transmembrane protein, variant [Cryptococcus neoformans var. grubii H99] >AFR98020.2 transmembrane protein [Cryptococcus neoformans var. grubii H99] >AGV14731.1 transmembrane protein, variant [Cryptococcus neoformans var. grubii H99] >OWZ30755.1 transmembrane protein [Cryptococcus neoformans var. grubii AD1-83a] >OWZ34583.1 transmembrane protein [Cryptococcus neoformans var. grubii AD2-60a] >OWZ46667.1 transmembrane protein [Cryptococcus neoformans var. grubii C23] >OXC81854.1 transmembrane protein [Cryptococcus neoformans var. grubii AD1-7a] >OXG34586.1 transmembrane protein [Cryptococcus neoformans var. grubii Bt120] >OXG38179.1 transmembrane protein [Cryptococcus neoformans var. grubii Bt15] >OXG48625.1 transmembrane protein [Cryptococcus neoformans var. grubii MW-RSA1955] >OXG58370.1 transmembrane protein [Cryptococcus neoformans var. grubii c8] >OXG78369.1 transmembrane protein [Cryptococcus neoformans var. grubii D17-1] >OXG98245.1 transmembrane protein [Cryptococcus neoformans var. grubii A2-102-5] >OXH02550.1 transmembrane protein [Cryptococcus neoformans var. grubii A5-35-17] >OXH04096.1 transmembrane protein [Cryptococcus neoformans var. grubii A1-35-8] >OXH24280.1 transmembrane protein [Cryptococcus neoformans var. grubii] >AUB28116.1 hypothetical protein CKF44_001625 [Cryptococcus neoformans var. grubii] >AUB28117.1 hypothetical protein CKF44_001625 [Cryptococcus neoformans var. grubii])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query:  145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            R R+  + D  R   + R++ E E+A+W+N  L R W  +EP+LS  +  +    L  V P GV +  +  FTLG K+P +   R          K PED ++M   + F   DL              K+V+  +   G     +P+ ++D    G+MR ++ L+  +PH+ T   +F+E P  ++ + P     +G  +  +P LA  ++ Q+   +   +  P   T +L +  S  T +  A G++ VTVL+AR
Sbjct:  228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_014771194.1 (PREDICTED: uncharacterized protein LOC106869820 isoform X1 [Octopus bimaculoides])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 144/691 (20.84%), Postives = 267/691 (38.64%), Query Frame = 0
Query:  146 LRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARI------------------ITRHPLFDSKVPEDRIVMHMNMGFQAPDLKIVI---LAKTSYGTIPIKIKDFYLQGRMRCEMDLV--PRYPHISTASFTFLETPICEFDILPM-GVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNL-----IETQSEATSVACADGIMFVTVLEARLPPHGAAGGSSSKNAQNVVALNGSEYYMKLQLGEEFMVTREVQEDDGAGDKRLDRWLGGGDIRSPTRANRLSGHAPNIATTGHLTPHLPNRLSRALTAHLNLLSQEPRQPRLLFGDETFAFLVGGNVGAVDTVKLTLKQRRTKTSRTVCSLAVPLEEALDPDAPKEGSRIQVPLLDGQGEGGGQVTLALRYVSLPEVVLEQTQATVIHRVNEHTLSPVDVDAESPGLLKATDHPYAGSLVLIVHKAEELPSTDVHGVRDSYAVVFAGEREVFRTKTVPTKTLAPEWEQSKEFSTFDVRQVKLTLAIYDAD-RGYGEKEALAAVELDVHELFTAEGHVHSGRRVKHINKHYFRLQKPGAGGSVNMGSARGGYGAGGGGRDLAVPDRGKSRKGGDMEGNRGKSGKSKSYGFLCVSVLFRPLPAIAMAPDF 807
            +R+++ L+      RKR L+++ETAEWLN +  R W F    +   +++   +++  ++P+ +   E+  F+LG  +P +   R+                  IT+ P         ++V+ +++   + D +++    L   + G   + I++  ++G ++  +D+     +PH S A+  F ETP   F+I  M G+ VME+P L   + + +  GI + ++ PAK+  +L     ++ Q       CA G++ V +                                                                                     G+  P++ N L   +   L  LS   RQ   ++  + +  +    V  + T KL LK    K  R + S+ +   E L    P +       +L  + + G ++ L+L+Y  L  + LE +        +E  +  V                 AG L + +H A  L + D +G  D Y VVF+  R +  T  VP ++L P WE   EF   D  + KL+  ++D D R   + + L    LDVH+    +  + +        K    ++K     ++++G+ R   G         V D                    KS G++ VSV+FRP+P++A + ++
Sbjct:   73 IRKISSLEQL-AVHRKRALRQNETAEWLNFLFNRWWVFSSTSIQDLVKRRLDDRMMNIKPAFLKQLELLTFSLGINTPTVRHIRVFEYAEGVPRGSKTLAWLDITKPPPGLENKSSFKVVVEVDVDMISEDFRMIFKVGLGARNIG-FNVAIEELTIRGTLQINLDMSMDTPFPHFSKATVYFTETPDVWFNISVMGGLQVMEMPLLKTWIHTHVKEGITKALVDPAKLDVSLASVGPVQYQRSMVKRQCAQGVLTVHI------------------------------------------------------------------------------------KGYPKPNIDNGLDDVVYTVLR-LSDHKRQCPEVYDSQNWEDICSFLVSDLSTDKLHLKY---KCKRLLTSVTLEEHEILLSQYPFQIKGEVDTIL--ENKDGSKLYLSLQYTPLAPIKLESSIK------DEQVIKDV-----------------AGVLYVHIHGATNLLAADKNGTSDPYCVVFSERRRIVTTPYVP-RSLNPRWETYSEFFVKDFTKTKLSFYVFDWDGRNIIDDDFLGCAFLDVHQ----DKWIRNSANEWTHQKENVCIRK-----ALSLGNDRPSSG--------FVAD--------------------KSLGYVIVSVIFRPVPSVAKSENY 610          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_014771196.1 (PREDICTED: extended synaptotagmin-1-like isoform X3 [Octopus bimaculoides])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 144/691 (20.84%), Postives = 267/691 (38.64%), Query Frame = 0
Query:  146 LRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARI------------------ITRHPLFDSKVPEDRIVMHMNMGFQAPDLKIVI---LAKTSYGTIPIKIKDFYLQGRMRCEMDLV--PRYPHISTASFTFLETPICEFDILPM-GVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNL-----IETQSEATSVACADGIMFVTVLEARLPPHGAAGGSSSKNAQNVVALNGSEYYMKLQLGEEFMVTREVQEDDGAGDKRLDRWLGGGDIRSPTRANRLSGHAPNIATTGHLTPHLPNRLSRALTAHLNLLSQEPRQPRLLFGDETFAFLVGGNVGAVDTVKLTLKQRRTKTSRTVCSLAVPLEEALDPDAPKEGSRIQVPLLDGQGEGGGQVTLALRYVSLPEVVLEQTQATVIHRVNEHTLSPVDVDAESPGLLKATDHPYAGSLVLIVHKAEELPSTDVHGVRDSYAVVFAGEREVFRTKTVPTKTLAPEWEQSKEFSTFDVRQVKLTLAIYDAD-RGYGEKEALAAVELDVHELFTAEGHVHSGRRVKHINKHYFRLQKPGAGGSVNMGSARGGYGAGGGGRDLAVPDRGKSRKGGDMEGNRGKSGKSKSYGFLCVSVLFRPLPAIAMAPDF 807
            +R+++ L+      RKR L+++ETAEWLN +  R W F    +   +++   +++  ++P+ +   E+  F+LG  +P +   R+                  IT+ P         ++V+ +++   + D +++    L   + G   + I++  ++G ++  +D+     +PH S A+  F ETP   F+I  M G+ VME+P L   + + +  GI + ++ PAK+  +L     ++ Q       CA G++ V +                                                                                     G+  P++ N L   +   L  LS   RQ   ++  + +  +    V  + T KL LK    K  R + S+ +   E L    P +       +L  + + G ++ L+L+Y  L  + LE +        +E  +  V                 AG L + +H A  L + D +G  D Y VVF+  R +  T  VP ++L P WE   EF   D  + KL+  ++D D R   + + L    LDVH+    +  + +        K    ++K     ++++G+ R   G         V D                    KS G++ VSV+FRP+P++A + ++
Sbjct:   73 IRKISSLEQL-AVHRKRALRQNETAEWLNFLFNRWWVFSSTSIQDLVKRRLDDRMMNIKPAFLKQLELLTFSLGINTPTVRHIRVFEYAEGVPRGSKTLAWLDITKPPPGLENKSSFKVVVEVDVDMISEDFRMIFKVGLGARNIG-FNVAIEELTIRGTLQINLDMSMDTPFPHFSKATVYFTETPDVWFNISVMGGLQVMEMPLLKTWIHTHVKEGITKALVDPAKLDVSLASVGPVQYQRSMVKRQCAQGVLTVHI------------------------------------------------------------------------------------KGYPKPNIDNGLDDVVYTVLR-LSDHKRQCPEVYDSQNWEDICSFLVSDLSTDKLHLKY---KCKRLLTSVTLEEHEILLSQYPFQIKGEVDTIL--ENKDGSKLYLSLQYTPLAPIKLESSIK------DEQVIKDV-----------------AGVLYVHIHGATNLLAADKNGTSDPYCVVFSERRRIVTTPYVP-RSLNPRWETYSEFFVKDFTKTKLSFYVFDWDGRNIIDDDFLGCAFLDVHQ----DKWIRNSANEWTHQKENVCIRK-----ALSLGNDRPSSG--------FVAD--------------------KSLGYVIVSVIFRPVPSVAKSENY 610          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: XP_018997057.1 (hypothetical protein L202_01282 [Cryptococcus amylolentus CBS 6039] >ODN83057.1 hypothetical protein L202_01282 [Cryptococcus amylolentus CBS 6039])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 71/259 (27.41%), Postives = 121/259 (46.72%), Query Frame = 0
Query:  144 ERLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYGTI----PIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            +R R  A+ D  R   + R++ E E+A+W+N  L R W  +EP+LS  +  +    L  V P GV +  +  FTLG K+P +   R          K PED ++M   + F   D+              K+V+  +   G +    PI ++D    G+MR ++ L+  +PH+ T   +F+E P  ++ + P     +G  +  +P LA  ++ Q+   +   +  P   T +L E     T +  A G++ VTV +AR
Sbjct:  224 QRTRDRARDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDAALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWAISFTPNDIQDVTPRQQAKQVNPKVVLSIRIGKGVVSKALPILLEDMSFSGKMRIKLKLMTNFPHVKTVDISFIEKPTFDYVLKPIGGETLGFDINSIPALAPFIRDQVHANLGPMMYDPNSFTIDL-EQLLSGTPLDAAIGVLRVTVTDAR 474          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: ODO10673.1 (hypothetical protein I350_01270 [Cryptococcus amylolentus CBS 6273])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 71/259 (27.41%), Postives = 121/259 (46.72%), Query Frame = 0
Query:  144 ERLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYGTI----PIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            +R R  A+ D  R   + R++ E E+A+W+N  L R W  +EP+LS  +  +    L  V P GV +  +  FTLG K+P +   R          K PED ++M   + F   D+              K+V+  +   G +    PI ++D    G+MR ++ L+  +PH+ T   +F+E P  ++ + P     +G  +  +P LA  ++ Q+   +   +  P   T +L E     T +  A G++ VTV +AR
Sbjct:  224 QRTRDRARDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDAALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWAISFTPNDIQDVTPRQQAKQVNPKVVLSIRIGKGVVSKALPILLEDMSFSGKMRIKLKLMTNFPHVKTVDISFIEKPTFDYVLKPIGGETLGFDINSIPALAPFIRDQVHANLGPMMYDPNSFTIDL-EQLLSGTPLDAAIGVLRVTVTDAR 474          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OWZ55790.1 (transmembrane protein [Cryptococcus neoformans var. grubii 125.91])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query:  145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            R R+  + D  R   + R++ E E+A+W+N  L R W  +EP+LS  +  +    L  V P GV +  +  FTLG K+P +   R          K PED ++M   + F   DL              K+V+  +   G     +P+ ++D    G+MR ++ L+  +PH+ T   +F+E P  ++ + P     +G  +  +P LA  ++ Q+   +   +  P   T +L +  S  T +  A G++ VTVL+AR
Sbjct:  228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477          
BLAST of NO07G00890 vs. NCBI_GenBank
Match: OWZ63671.1 (hypothetical protein AYX15_04399 [Cryptococcus neoformans var. grubii])

HSP 1 Score: 109.4 bits (272), Expect = 6.000e-20
Identity = 71/258 (27.52%), Postives = 122/258 (47.29%), Query Frame = 0
Query:  145 RLRRLAKLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKLEAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHMNMGFQAPDL--------------KIVILAKTSYG----TIPIKIKDFYLQGRMRCEMDLVPRYPHISTASFTFLETPICEFDILP-----MGVSVMEVPYLAAILQSQIVYGINEHILHPAKVTFNLIETQSEATSVACADGIMFVTVLEAR 380
            R R+  + D  R   + R++ E E+A+W+N  L R W  +EP+LS  +  +    L  V P GV +  +  FTLG K+P +   R          K PED ++M   + F   DL              K+V+  +   G     +P+ ++D    G+MR ++ L+  +PH+ T   +F+E P  ++ + P     +G  +  +P LA  ++ Q+   +   +  P   T +L +  S  T +  A G++ VTVL+AR
Sbjct:  228 RTRQRVRDDIQRELVKTRLVTETESADWINSFLERFWLIYEPVLSQTIIASTDSALAGVAPPGVDSIRMTTFTLGTKAPRIDYVRTF-------PKTPEDIVIMDWALSFTPNDLEDITPRQAAKQVNPKVVLSIRVGKGALSKALPVLLEDMSFSGKMRIKLKLMTNFPHVQTVDISFIEKPTFDYVLKPIGGETLGFDINSIPGLAPFIRDQVHSNLGPMMYDPNVFTIDLQQLLS-GTPLDAAIGVLRVTVLDAR 477          
The following BLAST results are available for this feature:
BLAST of NO07G00890 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
EWM27283.13.100e-25060.61transmembrane protein [Nannochloropsis gaditana][more]
XP_018259792.12.400e-2129.46transmembrane protein [Kwoniella dejecticola CBS 1... [more]
XP_019032660.14.600e-2027.41transmembrane protein [Tsuchiyaea wingfieldii CBS ... [more]
XP_012052464.16.000e-2027.52transmembrane protein [Cryptococcus neoformans var... [more]
XP_014771194.16.000e-2020.84PREDICTED: uncharacterized protein LOC106869820 is... [more]
XP_014771196.16.000e-2020.84PREDICTED: extended synaptotagmin-1-like isoform X... [more]
XP_018997057.16.000e-2027.41hypothetical protein L202_01282 [Cryptococcus amyl... [more]
ODO10673.16.000e-2027.41hypothetical protein I350_01270 [Cryptococcus amyl... [more]
OWZ55790.16.000e-2027.52transmembrane protein [Cryptococcus neoformans var... [more]
OWZ63671.16.000e-2027.52hypothetical protein AYX15_04399 [Cryptococcus neo... [more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL101nonsL101Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00890.1NO07G00890.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580247gene_2406Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100080g7gene3264Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00890.1NO07G00890.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00890 ID=NO07G00890|Name=NO07G00890|organism=Nannochloropsis oceanica|type=gene|length=6505bp
CCCCCATCCCCTCGCCCTCTTCCTTCTCCAATCCATCCATTCCTCCCAAG
CCCACAATCCCAGCAGTCGCAGTCGCCGCCTTCCCTCCAACACTCACCCA
GCCGATCAGACTCTTTTCCGTGAGCCAGTGGCAGCCCCGGAGGTCAAGTT
CTTGCACGTACCCACAGGACGCTCCTACGGTCGACAACACCTCCTTTGCT
GTCATGGTGACGTCCGCATTAAAACACCGGGGAACGGCCAAGTGCCGCAC
CGTGGTCAAATGCCTCCCGATCCCTTCCACGCACAGAGGGGTCAACCCAG
GACTGCTCACAAGGAGGGATTGAAGAATGGCACATCCACCGAGTTGGGGT
TCCTGCGTCGCGTCCTCCCAAGAGGCAGTGGGGGAAAGCTGTCGAAGCCG
CGGAAACATGGCTCGAGCAAGCCCAGAGTCCGTGAAACTCCCGACGAGGA
CAAGGTAGAGGGCGGAGGGTTGGCAGAGCAAGGGGAGGGAAGCATCCGTG
ATGGCGTGGGAAAGAGACGCTGCGAGGGAAATACGCGCCAAGCACCGGGA
GGGGAGAAGGCTGAAGATTCCTTGAATGGCGTCAGCTGTAGTGCTCTCGC
CGCTGTCATCGTCACTTCCTCCCTCTTCTTCTTCTTCTCCCCTTTCTTCC
CCCTCCACTTCCTCCTCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGCCG
GCGCTCCTGCTGCTACCGCTTCATGTTCTCTCCTCACTTGAGCCTCTCCC
ACCTCCTTATCCAAAGCACACGCAGCACCGTAGAGAGGCAGATCCGCACC
CACCTGACGGCAACATAGCTCGGTAAGGCTCACGATGGGCGAAGCCTCCT
GGTCCTTTCCCCCTTCCTTTCCTGTATCCCCCATTTCCTCCGCCTCATCA
AATTTAACACCTCTCCTCATTTCCCAGGACAACCAATCCTCCAGAGAAAT
ATCCCCCCCATCCTCATCCCCCTCCCTCCTACACCCTACACCATCCTTCT
TTCTACTTCGTGCTGCTACCGGAGCCGTCAAATTTGCTGCCGCCGCAGAG
GGCGGACCTCTCAAGTAAGACTCAACAAAGCGTGCAGCAGCTTGAGAATT
CACCCGTGCCACCACTGCCCCGGACCCGCTGCCGTTGATTCCTCCTCGTT
GGTGGCGCAGACGGAACTGCTGCAACCACCCGCCATTCGCGTTTTTGCTA
ATGACATTACTGGCCTTGTTGGTGCCGGCTGCGGTGACTGCAGCGCTGGT
GCTGCCTGAGCGACGTAATTGATAATGTGCCTCGGCAAGGGTTCTGAGCC
ATTTGCTGGCCTGGTCTTTCTTGGAGTAGCCATCCCAGGAGTGCTTGCCC
TTTTTGCGGCCGCGTGCCATGACTTTGTGCACGGATGGTGTAGAGGCGAT
GCGGAGGGAAATGTGAAGAGGTTGCGAGAAGCCCTGCTGTAGAAGTGGTG
TGGGTGGGGGCGGGGGGTCGAGGGAAATCAGTACGAGTTGATTTAGGGGC
ATTGGGTCACGCGGTAGCATAAGAACGGCATACAAAAGATATGCCCAGCA
TCAAATGCAGCGAGGAGGAGTCGTGTGCACAGATTGAGCCTTGTGGAGTG
GGTATCAGGAAGGGGGCTATGTGTGTGCATCTACGTAATGCAACCTTTCA
GAGCTCGACAAGGATGGATGGACTAAGAGGCGATCTGATGTGCAGAAAGC
CGTCAAGCAAAGGGCACGGCCATGATTGGCATATCATAGACTCTCAAACA
CATCTGACATAATTGGCCACGCTTGATCATTTAAGCGCAGCACGGCTACC
AGTGAGGGTATGCATGTGTGAAGCGATGCAGGGTGTGTGGCGGGAGATCT
GCCAGGTCAGCGGAAGATTGAAACACACAGCCGCCCACGATGCAGGGTAG
CCCAAGGGATTTATGACAGCCGTGCTGTAACGCTGTGCGAGTAAAGCCGT
GGGGACGCGgtaagctacaaagtgtgcttgtgatggtcttcagcactgcg
gcgtgtggtatggggtggtgtttctcaatttctgctcgaactttttcctt
cgacgcgaccgttgccgttgaatgctggcccattcattggccaatcaacc
aatcaacccaatcaactcacaacatgtcattgtatacagGCGGGAGGGAG
GTGGGCACTGACCAGCAGTGCACAAAGGTACGAAATCGACGACGACGATG
CCTAAGAACGCTTCCCCGAGCTCTATGTGGCAGCGTAAGCCCAAAGACGT
ACCTGGACGCATGGCGCCATCGGGCGCGGGCTTAAATAGCACGACGgtac
gtgtaattttacgagcgcctcttcggaatgactgaggctctgggtgaata
tggatatcctgtcaatcgttctataggggtacatggcagccttgccgctg
tcctggtgcaaaatgccacgtcgtgcgcattgccgcatcgtgcgtgcggc
ctcccctcccgtcaccattccatttcattcgtccaccctgcgtacagtgt
gcggttcttttgtcttgcccgtcgattcaccctatgtatagagtgtggtt
tttatatgtgttttgtatgcgaaaaagcatcagtgcatgcgtgttcccct
tcgagcaaggggtcttttccccctcttcgctccctcgtcattgccccgca
cctgctggccctcgataactcttcccccaatactttaacatcccatttag
cgctacaataattgtacggccacaaggaaacctcatttttatttccgtca
caaaatcacacgatgtaaagACACAGAACAGCCCACCCCCCACCATCCAC
CTCTGCCCAGAACAAGACAACGATGCTACTAGTCCTGCCAGCCCCACACC
CCAGCTGCAACCTCAATCCACCGCCACCCCTGCACACATCTATCAAGCAA
CTAATTATACAGCAGCGGCCTCCCCTACGAAAAAGAATAGCTCGCGCATT
CGGAGTGAGACTGGCCAAGCCCTGCTGGTGCCCGCCCTGCTCTGCGGAGT
CTTAGGTCCGCTGTGTTGGGTGCTCGGAAGGCTGCGATGGTCGTTCCCTT
GTGCGCTATGGTCGTCCATTGTCATTGTCTACGCAGTTTCTGGCCTACGG
GAGCGCTTGCGTCGGTTGGCCAAGCTCGATGCTGCCCGCACCGCCTTTCG
CAAGCGCGTCTTGCAGGAAGACGAGACGGCTGAGTGGCTTAACATCATCC
TCTTCCGAGTCTGGCAATTTCATGAGCCTCTGCTGTCCTCCAAGCTCCGG
CAGGCCTTCTTTGAGAAACTTGAGGCTGTCCGCCCCTCTGGGGTGTTGGC
TTTTGAAATCCCTCTTTTTACCTTGGGGAAGAAATCGCCTTACATGAGCT
CGGCGCGCATTATTACCCGGCATCCGCTTTTCGATAGCAAGGTACCAGAG
GACCGAATCGTCATGCACATGAACATGGGATTTCAGGCACCTGATTTGAA
GATTGTAATTTTGGCCAAGACGAGCTACGGgtaagtgaggcctggaggga
gaagcagggggaaaggtgggagggagggaggaaatgtcagcatgctcact
cactcgtctgtcctcgtctcttcacgtcacttgttttgtttatccatcat
ataagacccattgtctcttcttattttttttgtatcctttagttcaacac
ttctttccattcctcctttgctcgcttccaaacagCACCATTCCGATTAA
AATTAAGGACTTCTACTTGCAAGGTCGGATGCGCTGCGAGATGGATTTAG
TCCCCCGCTACCCCCACATCTCTACCGCCTCCTTCACCTTCTTGGAAACG
CCCATCTGCGAATTCGACATTCTGCCAATGGGTGTGAGCGTCATGGAGGT
GCCCTATCTGGCCGCAATTCTGCAAAGCCAGATCGTGTATGGCATCAACG
AGCACATCCTCCACCCTGCCAAAGTCACTTTTAATCTGATCGAAACGCAG
TCCGAGGCCACATCGGTGGCATGTGCCGATGGCATCATGTTTGTCACGGT
CCTCGAAGCTCGCTTGCCTCCGCACGGGGCTGCTGGTGGGAGCAGCAGCA
AAAACGCGCAGAATGTAGTGGCCTTGAATGGCTCTGAATACTACATGAAG
CTACAACTGGGAGAGGAGTTCATGGTCACGCGAGAGGTACAGGAGGATGA
TGGCGCGGGAGATAAAAGACTGGACCGCTGGCTAGGTGGCGGAGATATTC
GCTCACCCACGCGCGCTAATCGCCTGTCTGGGCATGCCCCTAATATCGCA
ACGACCGGGCACCTCACCCCGCATCTCCCAAACCGCCTCAGTCGAGCGCT
CACCGCCCACCTAAACCTGCTCAGCCAAGAACCACGCCAACCCCGACTTT
TATTTGGCGATGAGACGTTTGCCTTTTTGGTTGGCGGCAATGTGGGTGCA
GTAGATACGGTGAAATTGACGCTGAAGCAGAGGCGAACGAAGACCTCCCG
GACGGTCTGCTCCCTCGCCGTGCCCCTTGAAGAGGCCCTGGATCCGGATG
CACCCAAGGAGGGATCGCGCATACAGGTACCGTTGCTCGACGGGCAAGGA
GAGGGAGGCGGACAGGTCACTCTAGCTTTGAGGTACGTGAGTCTTCCGGA
GGTGGTCTTGGAGCAGACGCAGGCAACAGTCATCCATCGCGTGAACGAGC
ATACACTTAGTCCCGTGGACGTCGACGCCGAGTCCCCAGGATTGCTCAAG
GCCACGGACCATCCCTACGCTGGTTCGCTGGTGTTGATAGTGCACAAGGC
CGAAGAACTACCCTCGACAGACGTACATGGCGTGCGGGACTCTTACGCAG
TGGTTTTCGCGGGGGAGCGTGAGGTGTTTCGAACCAAGACGGTGCCGACC
AAGACATTGGCGCCAGAGTGGGAGCAGAGTAAGGAGTTCAGCACGTTCGA
TGTGCGTCAGGTGAAGCTGACGCTTGCGATTTATGATGCCGACCGAGGAT
ATGGCGAGAAGGAGGCCTTGGCGGCTGTGGAGCTGGACGTACACGAATTG
TTCACGGCGGAAGGACATGTGCACAGTGGGCGCCGCGTCAAGCATATAAA
TAAGCACTATTTTCGCCTGCAAAAGCCTGGGGCTGGAGGAAGCGTGAACA
TGGGCTCTGCCAGAGGAGGATATGGGGCAGGAGGAGGGGGAAGAGATCTA
GCAGTCCCCGATAGAGGGAAGAGTCGAAAGGGCGGCGATATGGAGGGGAA
CCGAGGAAAGTCGGGAAAGTCTAAGTCTTACGGGTTCCTATGTGTGTCGG
TGCTCTTCCGTCCCTTGCCAGCCATCGCGATGGCACCAGATTTCACTTTC
CGCTCGACCATCGGGAACAAGGAAGATGACGCGGCGGGCATCGGTGAGAG
CTTGCAGAAAATTTCGGAAACAGGGGGTGCGGGAGGGAAAAGGTCGCCCA
GAGATGGATCTAGGAACTTGAAATGGGCAAAATCTTCGTCGTCGTCGGGC
AAGCCCAGAACCGCCGCTGCGCCACAACGGATGCTGACTGGAGTCGTTGA
GGATGAGACGGAGGAAGAGGAGAACAACACGCCGAAGAAAAGCTCCAATA
AATTTTTTCGGTTCTTTCGCGACCGTCACAAGGGCAGAACCTCTCCGTCC
TAGAGGGAAGGCCATCACATGAGCGACGACGTTGAAATTTTTCGCCGAAG
AGAGATTGGCCGTGGAAGAGGTGAGTAGGAGACGAGCGGAGGATGCAAGA
GGGGAAGCCGGGGAGGAGCCAGTCGAAGGACGGCATGTAAGGTGAGAGGG
TAACTCTTCAGATGCCCTCAGACACATGTTCTGATGACCATAGAGAAAGT
GGGGTAAGATGCGAGGGAGACTAGGTAAATTATACGGCGCTGCTAGGAGC
TCAAGAGGGGAAAGCTGCGCGGGAAATGGAGTGGAAAATGAAATGACAAC
ATAATGTGCAGGACCCCCAAAAATTTATAAAGGGTGTTTTTAAATATCTT
ATGCATACAACACGCACTTGCCCACATGTTCTCATTTTTTATTGGCCCTT
TGTTTATTCAATTTTTGTTCTACTTTTTCTTCTTGGCCTGCTGCGCTCGC
TTGCCCTCCCCCTTCTTAGTGGGGGGGTTGCCTCTCATGTACATCCGCGA
CAATCTGTTCTCCCGCCAAATGTCTAGGTCAGTCTTGTACCCGTACCACT
CCTTGTGCGCAATCTTGTTGATCGTAGCGGGATAGTACGTCACCACCTTG
TCTGCAATCAAGGCCTTGCGAAGGATTTTGTTGCCCGTCTTGCCAATATT
TAATTGAGGCAGGTTGCCAAATATCCGGCGCGAGGCCTCCTTCAGGCCCG
TCACTTCGGCCGCGCCCAGGACTATCTTACCCAGCTTGCTGCCCGTGCTC
ATGGTAAATGCTTGGTGATGATGATGGCTGGGCCGTTGCAGAAGTTGCCT
CTCCTTGTGTGCCGCCGCCTGCCGCTTGATGCCCGCCACTGAATAACCAC
CTGTA
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protein sequence of NO07G00890.1

>NO07G00890.1-protein ID=NO07G00890.1-protein|Name=NO07G00890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=909bp
MPKNASPSSMWQRKPKDVPGRMAPSGAGLNSTTTQNSPPPTIHLCPEQDN
DATSPASPTPQLQPQSTATPAHIYQATNYTAAASPTKKNSSRIRSETGQA
LLVPALLCGVLGPLCWVLGRLRWSFPCALWSSIVIVYAVSGLRERLRRLA
KLDAARTAFRKRVLQEDETAEWLNIILFRVWQFHEPLLSSKLRQAFFEKL
EAVRPSGVLAFEIPLFTLGKKSPYMSSARIITRHPLFDSKVPEDRIVMHM
NMGFQAPDLKIVILAKTSYGTIPIKIKDFYLQGRMRCEMDLVPRYPHIST
ASFTFLETPICEFDILPMGVSVMEVPYLAAILQSQIVYGINEHILHPAKV
TFNLIETQSEATSVACADGIMFVTVLEARLPPHGAAGGSSSKNAQNVVAL
NGSEYYMKLQLGEEFMVTREVQEDDGAGDKRLDRWLGGGDIRSPTRANRL
SGHAPNIATTGHLTPHLPNRLSRALTAHLNLLSQEPRQPRLLFGDETFAF
LVGGNVGAVDTVKLTLKQRRTKTSRTVCSLAVPLEEALDPDAPKEGSRIQ
VPLLDGQGEGGGQVTLALRYVSLPEVVLEQTQATVIHRVNEHTLSPVDVD
AESPGLLKATDHPYAGSLVLIVHKAEELPSTDVHGVRDSYAVVFAGEREV
FRTKTVPTKTLAPEWEQSKEFSTFDVRQVKLTLAIYDADRGYGEKEALAA
VELDVHELFTAEGHVHSGRRVKHINKHYFRLQKPGAGGSVNMGSARGGYG
AGGGGRDLAVPDRGKSRKGGDMEGNRGKSGKSKSYGFLCVSVLFRPLPAI
AMAPDFTFRSTIGNKEDDAAGIGESLQKISETGGAGGKRSPRDGSRNLKW
AKSSSSSGKPRTAAAPQRMLTGVVEDETEEEENNTPKKSSNKFFRFFRDR
HKGRTSPS*
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Synonyms
Publications