NO07G00880, NO07G00880 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00880 vs. NCBI_GenBank
Match: EWM27287.1 (hypothetical protein Naga_100080g3 [Nannochloropsis gaditana]) HSP 1 Score: 195.3 bits (495), Expect = 2.800e-46 Identity = 98/161 (60.87%), Postives = 120/161 (74.53%), Query Frame = 0 Query: 141 MPLVYSSLLLPGSRNQSPPAWPFCVGSFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFVENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQTLPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAAFVSVPVVGPCLYLLLRPAL 302 MP VY+SLLL GSR+Q PPAWPF + SFA GFFA+GPYLALR ++P P ++ + R +E+KLPA LAF++SLYL EAYL+LF +QTLPHVSSLDL +LS+FV DP+REDM+RR WYS G+L AFV++PVVGPCLYLLLRP L Sbjct: 1 MPFVYTSLLLSGSRDQIPPAWPFTLASFALGFFALGPYLALRRYRPFPDTAHASPWLTRVMESKLPALLAFLASLYLAWLIVDGLVSAGGR---EAYLSLFYSQTLPHVSSLDLGLLSLFVVDPLREDMVRRQWYSPGRLLAFVALPVVGPCLYLLLRPTL 158
BLAST of NO07G00880 vs. NCBI_GenBank
Match: XP_002506390.1 (predicted protein [Micromonas commoda] >ACO67648.1 predicted protein [Micromonas commoda]) HSP 1 Score: 139.4 bits (350), Expect = 1.800e-29 Identity = 100/257 (38.91%), Postives = 141/257 (54.86%), Query Frame = 0 Query: 52 SSPVLRASSREST--PGDEIGESNTPES--RGPRTLITALAWAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQSP-PAWPFCVGSFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFV-ENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQT-LPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAAFVSVPVVGPCLYLLLRPAL 302 S+P R S+ +T D G S+ P + R P L W G + A L+AP +T DA L+ ++ PFS + PIF A+FN+LG++P VY++LLLPG+++Q P P SFA GFFA+GPYL R + P S R + E+K+ AA + +L EA++ ++R Q+ L VSS DL +LS+ + + EDM RRG Y G K AAF +VPV+GPC+YLL RP+L Sbjct: 3 STPNRRRSNATATRASADPAG-SDAPYAPWRDPTRLGLLALWLGLGSVAALVAP---KGTTDFDAGLVTTLVSAPFSGAVNPIFEALFNSLGVVPAVYAALLLPGAKDQPRIPTVPPLAASFALGFFALGPYLIAREPRTEPVPRSSLGWATRTIFESKVFAAFNAAFAAFL----IAYGAANFTSDAAEAFVAMWRDQSALACVSSCDLTVLSIAMYGALAEDMRRRGCYDGAKAAAFCAVPVLGPCVYLLTRPSL 251
BLAST of NO07G00880 vs. NCBI_GenBank
Match: XP_003063437.1 (predicted protein [Micromonas pusilla CCMP1545] >EEH52573.1 predicted protein [Micromonas pusilla CCMP1545]) HSP 1 Score: 136.0 bits (341), Expect = 2.000e-28 Identity = 93/232 (40.09%), Postives = 125/232 (53.88%), Query Frame = 0 Query: 80 PRTLITALAWAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQ-SPPAWPFCVGSFAFGFFAMGPYLALR------SFQPSPGATPSNRM--VARFVENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQT-LPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAAFVSVPVVGPCLYLLLRPAL 302 P AL W A +AP + A DA+L+ ++ +PFS PIF A+FN+LG++P VY++LLLPG+R+Q P P V SFA GFFA+GPYL R S P A + + R V P AL +L+ LE + TL+R Q+ L VSS DLL+LS+ + D + EDM RRG + GK F ++PV+GPCL+LL RPAL Sbjct: 68 PGRAALALGWLALGGVATTVAPS---GTAAFDAELVTSLVTSPFSGAANPIFEALFNSLGVVPAVYAALLLPGARDQPRVPTLPPVVASFALGFFALGPYLITRRVRVVLSTAPRTSAPRRSELGWATRTVFESKPFAL--FQTLF-ATFLIAYAASHVDAETLEGFATLWREQSALACVSSCDLLVLSLAMYDALSEDMKRRGVFERGKALGFCALPVLGPCLWLLTRPAL 293
BLAST of NO07G00880 vs. NCBI_GenBank
Match: OLQ07574.1 (putative RNA 2'-phosphotransferase [Symbiodinium microadriaticum]) HSP 1 Score: 134.4 bits (337), Expect = 5.900e-28 Identity = 90/242 (37.19%), Postives = 122/242 (50.41%), Query Frame = 0 Query: 74 TPESRGPRTLITALAWAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQSP-PAWPFCVGSFAFGFFAMGPYLALRSFQPSPGATPS-NRMVARFVENKLPA--ALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQTLPHVSSLDLLILSVFVADPMREDMLRRG--------WYSGGKLAAFVS--VPVVGPCLYLLLRPAL 302 TP RG +L A W +AY+ LLAPGK P D L++ I PF ++ P+F IFN LG+ P++Y++ LLPG+ QSP PA PF GSF G FA+ PYLALR + G + + A +EN+L A LAF + L L ++ +F + HVSSLD ++L + + ED RRG W +G K VS +PV G +LL RP L Sbjct: 698 TPPPRG--SLAIAGTWMALLAYSVLLAPGKSPDERVADQALIQQIFTTPFDGSVNPLFCCIFNMLGIWPMIYAATLLPGADRQSPAPALPFVAGSFFLGAFALSPYLALRENRSVAGQSGEIDWATANILENRLTALVLLAFAAYLALFAVGNGVIGGFSPSEAFSGFMPVFGSSLTAHVSSLDFMVLWMLFGPVLLEDGRRRGVFLGSPDSWSAGNKAQFAVSALLPVFGGLAWLLSRPPL 937
BLAST of NO07G00880 vs. NCBI_GenBank
Match: XP_001417138.1 (predicted protein [Ostreococcus lucimarinus CCE9901] >ABO95431.1 predicted protein [Ostreococcus lucimarinus CCE9901]) HSP 1 Score: 128.6 bits (322), Expect = 3.300e-26 Identity = 90/245 (36.73%), Postives = 133/245 (54.29%), Query Frame = 0 Query: 61 RESTP-GDEIGESNTPESRGPRTLITALAWAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSR-NQSPPAWPFCVG-SFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFVENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQT-LPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAAFVSVPVVGPCLYLLLRPAL 302 R STP E + + R P+ + TA AW ++A AP ++A D +L+K ++ PF+ + P+F A+FN+LG++P Y+ L++PG++ N+SP CVG SFA GFFA+GPYL R + + + E+KL AA + YL L + TLF+ Q+ L VS+ DL++LS+ VA + EDM RR L AF SVPV+GP +LL+RP+L Sbjct: 14 RASTPEAREASDGSFEWYREPQRVATACAWVALGSFATFGAPS---GTSAFDLELVKSLVSAPFTGAVNPLFEALFNSLGVVPATYACLMMPGAKGNKSPFPAALCVGASFALGFFALGPYLVTREPRTRVKRSELGFVTRNIWESKLNAAALLGFAAYL----AFYGASNVTPDTLAGFATLFKEQSMLACVSTCDLIVLSLCVAPAIAEDMRRRDVDDANAL-AFASVPVLGPACWLLVRPSL 250
BLAST of NO07G00880 vs. NCBI_GenBank
Match: OUS49254.1 (hypothetical protein BE221DRAFT_188507 [Ostreococcus tauri]) HSP 1 Score: 128.6 bits (322), Expect = 3.300e-26 Identity = 96/278 (34.53%), Postives = 141/278 (50.72%), Query Frame = 0 Query: 27 PFSSRSGIRPLALSRRTAPIPTHHYSSPVLRASSRESTPGDEIGESNTPE-SRGPRTLITALAWAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQSPPAWPFCVG-SFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFVENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQT-LPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAAFVSVPVVGPCLYLLLRPAL 302 P +R+ P A + + + +RA + T D ++ E R P + A AWA A A AP ++ DA+L+K I+ +PF P+F A+FNALG++P Y+ LLLPG++ Q PA CVG SFA GFFA+GPYLA R+ + +P P + N + L ++ L + ++ L R Q+ L VS+ DL++LS + D + EDM RR G L A+ +VPVVGP L+L+LRP+L Sbjct: 6 PARARARWAPRAAGTTRRSVASASSRAVAVRARTAVKTDDDADDVADDFEWYRKPSRVAIAGAWATLGAVAAFAAPS---GTSGFDAELVKTIVTSPFGGVANPVFEALFNALGVVPATYACLLLPGAKGQKLPA-ALCVGASFALGFFALGPYLATRAPRTTP--APRRSELGWVTRNVWESKLNAVALLGFASFLAYYGVSNLSPENVSGFIALIREQSMLACVSTCDLVVLSACMVDAIGEDMKRRNVDPSGAL-AYAAVPVVGPALWLVLRPSL 276
BLAST of NO07G00880 vs. NCBI_GenBank
Match: XP_003078581.2 (unnamed product [Ostreococcus tauri] >CEF97429.1 unnamed product [Ostreococcus tauri]) HSP 1 Score: 128.3 bits (321), Expect = 4.300e-26 Identity = 96/278 (34.53%), Postives = 141/278 (50.72%), Query Frame = 0 Query: 27 PFSSRSGIRPLALSRRTAPIPTHHYSSPVLRASSRESTPGDEIGESNTPE-SRGPRTLITALAWAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQSPPAWPFCVG-SFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFVENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQT-LPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAAFVSVPVVGPCLYLLLRPAL 302 P +R+ P A + + + +RA + T D ++ E R P + A AWA A A AP ++ DA+L+K I+ +PF P+F A+FNALG++P Y+ LLLPG++ Q PA CVG SFA GFFA+GPYLA R+ + +P P + N + L ++ L + ++ L R Q+ L VS+ DL++LS + D + EDM RR G L A+ +VPVVGP L+L+LRP+L Sbjct: 6 PARARARWAPRAAGTTRRSVASASSRAVAVRARTAVKTDDDADDVADDFEWYRKPSRVAIAGAWATLGAVAAFAAPS---GTSGFDAELVKTIVTSPFGGVANPVFEALFNALGVVPATYACLLLPGAKGQKLPA-ALCVGASFALGFFAVGPYLATRAPRTTP--APRRSELGWVTRNVWESKLNAVALLGFASFLAYYGVSNLSPENVSGFIALIREQSMLACVSTCDLVVLSACMVDAIGEDMKRRNVDPSGAL-AYAAVPVVGPALWLVLRPSL 276
BLAST of NO07G00880 vs. NCBI_GenBank
Match: KOO26313.1 (hypothetical protein Ctob_005005 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 127.9 bits (320), Expect = 5.600e-26 Identity = 78/191 (40.84%), Postives = 107/191 (56.02%), Query Frame = 0 Query: 128 PPIFLAIFNALGLMPLVYSSLLLPGSRNQSPPAWPFCVGSFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFV-ENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQTLPHVSSLDLLILSVFVADPMREDMLRRGWYSG----------GKLAAFVSVPVVGPCLYLLLRPALSVDEEE 308 P IF IFNALG++P +Y+++LLPG+++Q P SF GF +GPYL LR +P P + +AR V E+KL ++SL L L Y +LF + +VSS DLL+LS+F +P+REDM RRGWY+ +LAAF +VPV+GP Y+L RPAL + E E Sbjct: 39 PSIFFVIFNALGVLPALYAAVLLPGAKDQRPAPPALIATSFFAGFGGLGPYLFLRQPRPQPISRAELGFIARTVTESKLFGVAMVLTSLGL---GAKLATIPDFDAALATYWSLFDQFGIVNVSSFDLLVLSLFFFEPLREDMQRRGWYAAPGEDPSTEEIARLAAFCAVPVLGPAAYVLARPALPLTESE 226
BLAST of NO07G00880 vs. NCBI_GenBank
Match: XP_005709326.1 (hypothetical protein Gasu_01650 [Galdieria sulphuraria] >EME32806.1 hypothetical protein Gasu_01650 [Galdieria sulphuraria]) HSP 1 Score: 126.3 bits (316), Expect = 1.600e-25 Identity = 83/235 (35.32%), Postives = 115/235 (48.94%), Query Frame = 0 Query: 89 WAGFVAYAFLLAPGKDPASTALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQSPPAWPFCVGSFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFVENK--LPAALAFISSLY---------LXXXXXXXXXXXXXXXXLEAYLTLFRTQTLPHVSSLDLLILSVFVADPMREDMLRRGWYSGGKLAA----FVS--VPVVGPCLYLLLRPALSVDEE 307 W F+ YAF APG + D + LK ++ NPF P + IF+ IFN LG++P +YSS LLP + S AWPF + S GFFA+GPYL LR +P + EN + F+ LY L + Y+ LF T L HVSS+D IL +F+ +P+ EDM RG++ L VS VP++GP +YL RP + ++E Sbjct: 80 WVSFLVYAFGFAPG-----SFGDVEWLKKLVSNPFHPEVNSIFVFIFNGLGVLPALYSSFLLPREKRDSLKAWPFLIVSLFLGFFALGPYLGLR--KPRYSLINEDEYQPTLTENNWFRYSLFVFVVVLYIFGLKIFPLLSTTGDGMPWDISLLSEWDEYVQLFHTNRLVHVSSIDFFILCMFLVEPLFEDMKLRGFFRDSLLLDRWLWIVSWVVPLIGPSIYLCTRPKRNNNKE 307
BLAST of NO07G00880 vs. NCBI_GenBank
Match: XP_005765914.1 (hypothetical protein EMIHUDRAFT_212564 [Emiliania huxleyi CCMP1516] >EOD13485.1 hypothetical protein EMIHUDRAFT_212564 [Emiliania huxleyi CCMP1516]) HSP 1 Score: 123.6 bits (309), Expect = 1.000e-24 Identity = 91/233 (39.06%), Postives = 112/233 (48.07%), Query Frame = 0 Query: 80 PRTLITALAWAGFVAYAFLLAPGKDPAST-ALDAQLLKDIIGNPFSPTLPPIFLAIFNALGLMPLVYSSLLLPGSRNQSP-PAWPFCVGSFAFGFFAMGPYLALRSFQPSPGATPSNRMVARFV-ENKLPAALAFISSLYLXXXXXXXXXXXXXXXXLEAYLTLFRTQTLPHVSSLDLLILSVFVADPMREDMLRRGWYSG--------GKLAAFVSVPVVGPCLYLLLRPAL 302 P ALAW F AY L +PG+ S + D QL+ I +P S L PIF A+FNALG Q P PA PF +F GF A GPYLALR +P P AR+V E++L + L L Y LF + L HVSS+DLL+LS F +P+REDM RRGW+ +L AF VPV+GP YL+LRP L Sbjct: 346 PARAAIALAWFSFSAYVALASPGEFSVSADSFDNQLIAKAIDDPTS--LNPIFFAVFNALG---------------GQRPLPAAPFVSAAFFLGFGAAGPYLALRQPRPDPVGRSELGFFARYVTESRLYGGGLLAAGAVL---LYGLLSMADPAAALSDYAELFGSSKLVHVSSIDLLVLSAFAFEPIREDMARRGWWDEAAEGTNNLARLLAFSLVPVLGPAAYLVLRPDL 558 The following BLAST results are available for this feature:
BLAST of NO07G00880 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00880 ID=NO07G00880|Name=NO07G00880|organism=Nannochloropsis oceanica|type=gene|length=1492bpback to top protein sequence of NO07G00880.1 >NO07G00880.1-protein ID=NO07G00880.1-protein|Name=NO07G00880.1|organism=Nannochloropsis oceanica|type=polypeptide|length=310bpback to top Synonyms
Publications
|