NO07G00740, NO07G00740 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00740 vs. NCBI_GenBank
Match: EWM27331.1 (ataxin 10 [Nannochloropsis gaditana]) HSP 1 Score: 254.2 bits (648), Expect = 1.100e-63 Identity = 203/665 (30.53%), Postives = 291/665 (43.76%), Query Frame = 0 Query: 2 IHTAYANASNSWVRERQXXXXXXXXXXXXXXXXXXXRAELVQIYKEGTTIKELRAARDACRTGGKGAQNRLLEKADDVLELLQIITIHYS--RPVNNTISPAEAEEERSAVRKLALAALQFLANLTAGNPRTAYWVFQKSYDGRFLEYLETFSEDRDLLMCTCVIIHNNLACAVEKSCAVEKLLEDGALICKLMRILLPHSALPPTPSSSLGE-------------------------EKNDPVFEWVYLVLLKILEAGKGKEAFMKTGLDEDMLQNALVLLEPGTEREHSPGYDRVMPHPSLLSVPPLWHGHGEEPAKKGXXXXXXXXXXXXXXGNVVMTHLGPPLSVFTAEQLVFLNLLEHSLTDTYVHKPSFSRSVDAHQKEGNGGKKERGVRAPTLLVTKDDGAMLVGMVSRVKTFLKYRSLYLPRTSVIG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVDKEALLANGLVGVILTLLRQEGGQADGCIPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAQ-DEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKLVEGGEGGGRARVILTKADGRGGD 637 +H +AS SW+RE + + L+Q+ G ELR ARDACR GG+ Q +L V +L I Y+ V++ AEA+ VR++AL ALQFLAN+TAGN T+ +F+ + G +++LE F +DR LL CTCV++HN LACA +K AV+ LE+ AL+ KL+R++LP S P PSSS+ E+ DPVFEW+YL+LLK+LEA +G AF K+GLD L ++ S+ SV G P PP +FTAEQLV L+L EH+LTD ++ E G +++ AP LL +D G ++ +V RVK +L R ++ G G ++ LL + ++ +IL LL+ EGG+A+G IP + E+ +E+ GL LVLNHCNVDS NPFLREWA+ C+R LC+ + EN+RV+ +Q QE VQ+ ++ E G+ A+LV + GR R+ + + GGD Sbjct: 7 LHATQIHASMSWLREYR-----EEEPEEVEEGHAKAHSGLLQLATAGKVTMELREARDACRIGGQATQTQLFPLYGKVKNILSRILFFYTSFNAVDDRFGVAEADTRE--VRRMALTALQFLANVTAGNAETSERLFKDARQGAIMDWLEGFGQDRKLLTCTCVVVHNYLACASQKKAAVKDFLEEAALVTKLLRLVLPPST-PSYPSSSVSSSCRAMGISAPRHHDRHRGPAGQAEGEEEDPVFEWIYLILLKVLEAQEGLRAFNKSGLDRYALHKEML--------------------TSIRSVSAKAPGPRRAP---------------------------PP--IFTAEQLVLLHLAEHTLTDRFL--------------ETQGQQRD---DAPLLL--RDGGVWVLELVHRVKEYLHARRFSARPSTASGAKASKGKEGQYEQARQPEWLLLDEAVATVMRLIGTLLAREERLEGGREKGKEDGRELRDLLLEHDVISLILQLLQGEGGKANGEIPPMDRARSHGGPASTAGPDGTQPSPSLPTPEGRKTRLIQVLGNLCHGHGRAQEMVREQQGLPLVLNHCNVDSENPFLREWAVVCVRFLCD-DPENRRVIASLQGQEVVQSPVMQEMGVDARLVAAEQ--GRLRLHVKRRSVEGGD 592
BLAST of NO07G00740 vs. NCBI_GenBank
Match: GBG29024.1 (Ataxin-10-like [Aurantiochytrium sp. FCC1311]) HSP 1 Score: 106.3 bits (264), Expect = 3.600e-19 Identity = 49/79 (62.03%), Postives = 62/79 (78.48%), Query Frame = 0 Query: 540 SAQDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKLVEGGE 619 S QD VR+ E GL +VLN CNVD +PFLREW + IRNLCEGN+ENQRV+ E++VQ VQTS+L++AGLR +L E G+ Sbjct: 446 SNQDAVREFENGLFIVLNQCNVDERSPFLREWGIVAIRNLCEGNEENQRVIAELRVQGTVQTSVLDKAGLRVELDESGK 524
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_018452910.1 (PREDICTED: ataxin-10-like [Raphanus sativus]) HSP 1 Score: 88.2 bits (217), Expect = 1.000e-13 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R E GGL ++L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 394 QDEIR-ERGGLFVMLQQCVTDDDNPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 464
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_013731237.1 (ataxin-10 isoform X1 [Brassica napus]) HSP 1 Score: 87.4 bits (215), Expect = 1.700e-13 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R E GL+L+L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 385 QDEIR-ERDGLLLMLQQCVTDDENPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 455
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_013731238.1 (ataxin-10 isoform X2 [Brassica napus]) HSP 1 Score: 87.4 bits (215), Expect = 1.700e-13 Identity = 39/72 (54.17%), Postives = 52/72 (72.22%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R E GL+L+L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 383 QDEIR-ERDGLLLMLQQCVTDDENPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 453
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_009111500.1 (PREDICTED: ataxin-10 isoform X1 [Brassica rapa]) HSP 1 Score: 86.7 bits (213), Expect = 2.900e-13 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R E GL L+L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 385 QDEIR-ERDGLFLMLQQCVTDDENPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 455
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_009111501.1 (PREDICTED: ataxin-10 isoform X2 [Brassica rapa]) HSP 1 Score: 86.7 bits (213), Expect = 2.900e-13 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R E GL L+L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 383 QDEIR-ERDGLFLMLQQCVTDDENPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 453
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_013606709.1 (PREDICTED: ataxin-10 [Brassica oleracea var. oleracea]) HSP 1 Score: 86.7 bits (213), Expect = 2.900e-13 Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R E GL L+L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 385 QDEIR-ERDGLFLMLQQCVTDDENPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 455
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_008375901.2 (PREDICTED: LOW QUALITY PROTEIN: ataxin-10 [Malus domestica]) HSP 1 Score: 86.3 bits (212), Expect = 3.800e-13 Identity = 36/71 (50.70%), Postives = 56/71 (78.87%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAK 613 QDE+R+++ G++L+L C +D NP+LREWA++C+RNL EGN+EN+RVV E+++Q AV T + + GLR + Sbjct: 409 QDEIRQKD-GILLLLQQCGLDDDNPYLREWAIWCVRNLFEGNEENERVVAELELQGAVDTPEIAQLGLRVE 478
BLAST of NO07G00740 vs. NCBI_GenBank
Match: XP_018464796.1 (PREDICTED: ataxin-10-like [Raphanus sativus]) HSP 1 Score: 85.5 bits (210), Expect = 6.500e-13 Identity = 38/72 (52.78%), Postives = 51/72 (70.83%), Query Frame = 0 Query: 542 QDEVRKEEGGLMLVLNHCNVDSSNPFLREWALFCIRNLCEGNDENQRVVGEVQVQEAVQTSMLNEAGLRAKL 614 QDE+R GGL ++L C D NPFLREW L+C+RNL EGN+ENQ+VV E+++Q +V L E GLR ++ Sbjct: 388 QDEIR-VRGGLFVMLQQCVTDDENPFLREWGLWCVRNLLEGNEENQKVVAELEMQGSVDVPQLREIGLRVEI 458 The following BLAST results are available for this feature:
BLAST of NO07G00740 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00740 ID=NO07G00740|Name=NO07G00740|organism=Nannochloropsis oceanica|type=gene|length=4123bpback to top protein sequence of NO07G00740.1 >NO07G00740.1-protein ID=NO07G00740.1-protein|Name=NO07G00740.1|organism=Nannochloropsis oceanica|type=polypeptide|length=640bpback to top Synonyms
Publications
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