NO07G00720, NO07G00720 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00720 vs. NCBI_GenBank
Match: CBJ48399.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 99.0 bits (245), Expect = 1.200e-17 Identity = 47/109 (43.12%), Postives = 70/109 (64.22%), Query Frame = 0 Query: 9 EGAVIWGTTYPILHFVRRFRQFIRSFKLKFDAGAGEEEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVINDEAARLRAMDGEEGGR 118 E AVIWGT ++ + RFRQF+ F L+ E+EP Y S L E+H T+E++I++NC+HL++ +P+RRLY + HYPQE V MD +N+E R+ + + G R Sbjct: 294 ERAVIWGTDVNVVESMERFRQFLLEFTLE------GEDEPLYKSQLEEIHRTQEFNISINCKHLYSFVPSRRLYQQLVHYPQEIVPIMDLAVNEEFTRMFSEEELMGSR 396
BLAST of NO07G00720 vs. NCBI_GenBank
Match: GAY04888.1 (DNA replication licensing factor mcm4, putative [Pythium insidiosum]) HSP 1 Score: 84.7 bits (208), Expect = 2.300e-13 Identity = 42/114 (36.84%), Postives = 63/114 (55.26%), Query Frame = 0 Query: 7 DLEGAVIWGTTYPILHFVRRFRQFIRSFKLKFDAGAGEE------EEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVINDEAARLRAMDGEE 115 DL GAV+WGT + + FR F+R F ++ DA EP+Y +LR + T+ NL+ +HL H P+R+LY+ + +PQ + +D V+NDE R+ A DG E Sbjct: 216 DLTGAVVWGTNISVAESMALFRTFLREFHVRGDADERSHPALLSTREPYYXGVLRHLALTQSPVFNLDTQHLLQHRPSRKLYNQLILFPQVLIRILDMVVNDELRRVVAQDGGE 329
BLAST of NO07G00720 vs. NCBI_GenBank
Match: KXN89729.1 (DNA replication licensing factor mcm4 [Leucoagaricus sp. SymC.cos]) HSP 1 Score: 73.2 bits (178), Expect = 7.000e-10 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 3 TGDADLEGAVIWGTTYPILHFVRRFRQFIRSFKLKFDAGAGEEEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVIND---EAARLRAMDGEEGGR 118 T D E IWGTT + ++ FR F++ FK K+ Y +LLR + T E ++N++ R+L + PA++LY +T YPQE + MD+V+ D E A L +G EG R Sbjct: 183 TSDEPDEIRAIWGTTVNLADTMKTFRDFLKGFKPKYRI---------YENLLRRMRQTGETNLNVDGRNLQAYPPAKKLYGQLTKYPQEVIPVMDQVLKDLMLETADLDQQEGREGMR 291
BLAST of NO07G00720 vs. NCBI_GenBank
Match: XP_016609079.1 (hypothetical protein SPPG_04133 [Spizellomyces punctatus DAOM BR117] >KND01040.1 hypothetical protein SPPG_04133 [Spizellomyces punctatus DAOM BR117]) HSP 1 Score: 71.2 bits (173), Expect = 2.700e-9 Identity = 38/108 (35.19%), Postives = 56/108 (51.85%), Query Frame = 0 Query: 3 TGDADLEGAVIWGTTYPILHFVRRFRQFIRSFKLKFDAGAGEEE--------EPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVIND 103 T D VIWGTT I ++ FR FI +F A G E EP Y LR++ + +Y++NL+C +L + PAR+LY+ + YPQE + MD + + Sbjct: 215 TSDPAAIRMVIWGTTVNIAESMQMFRDFITNFTQSQHAADGNNEEDMMDQDHEPFYPYYLRQLKESEDYNMNLDCSNLRVYQPARKLYNQLIRYPQEIIPLMDHTLTE 322
BLAST of NO07G00720 vs. NCBI_GenBank
Match: EIE86614.1 (hypothetical protein RO3G_11325 [Rhizopus delemar RA 99-880]) HSP 1 Score: 68.2 bits (165), Expect = 2.300e-8 Identity = 35/108 (32.41%), Postives = 53/108 (49.07%), Query Frame = 0 Query: 1 METGDADLEGAVIWGTTYPILHFVRRFRQFIRSFKLKF------DAGAGEEEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVIND 103 ME D L +IWGTT I + RFR F+ F L +A + ++ P Y L + T+ ++NLNC++L + R LY + YPQE + MD + + Sbjct: 112 MEETDPSLGARLIWGTTVNIQEAIGRFRNFLSHFTLAHRKEQTGEAMSADDHSPFYPMYLAHLFNTKSTNVNLNCKNLLAYPETRGLYEQLVKYPQEIIPLMDHTVTE 219
BLAST of NO07G00720 vs. NCBI_GenBank
Match: XP_003675774.1 (hypothetical protein NCAS_0C04200 [Naumovozyma castellii CBS 4309] >CCC69410.1 hypothetical protein NCAS_0C04200 [Naumovozyma castellii CBS 4309]) HSP 1 Score: 67.8 bits (164), Expect = 3.000e-8 Identity = 37/109 (33.94%), Postives = 54/109 (49.54%), Query Frame = 0 Query: 3 TGDADLEGAVIWGTTYPILHFVRRFRQFIRSFKLKFDAGAGE---------EEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVIND 103 T DA+ +IWGT I +FR F+ SFK KF E +EE +Y+ L E+ ++NL+ R+L LY+ + +YPQE +S MD+ I D Sbjct: 166 TSDANEPLRIIWGTNVSIQECATKFRNFLMSFKYKFRKTLDEREQFINSTTDEELYYVQQLNEMREVGNCNLNLDARNLLAFKQTEELYYQLLNYPQEVISIMDQTIKD 274
BLAST of NO07G00720 vs. NCBI_GenBank
Match: EIF49034.1 (cell division control protein 54 [Brettanomyces bruxellensis AWRI1499]) HSP 1 Score: 67.8 bits (164), Expect = 3.000e-8 Identity = 34/98 (34.69%), Postives = 54/98 (55.10%), Query Frame = 0 Query: 12 VIWGTTYPILHFVRRFRQFIRSFKLKF-------DAGAGEEEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVIND 103 VIWGT I FR F+ SFK+K+ E+E+ +Y+ +L + T ++NL+CR+L + ++LY+ + +YPQE V MD+ I D Sbjct: 193 VIWGTNVSIQECSDNFRTFLMSFKMKYRKKMDDTXEDPDEDEKLYYMDMLNMMKETNATNLNLDCRNLLAYSSTKKLYYQLINYPQEVVPIMDQTIKD 290
BLAST of NO07G00720 vs. NCBI_GenBank
Match: XP_011122947.1 (hypothetical protein AOL_s00080g270 [Arthrobotrys oligospora ATCC 24927] >EGX48641.1 hypothetical protein AOL_s00080g270 [Arthrobotrys oligospora ATCC 24927]) HSP 1 Score: 67.0 bits (162), Expect = 5.000e-8 Identity = 38/122 (31.15%), Postives = 62/122 (50.82%), Query Frame = 0 Query: 2 ETGDAD-LEGAVIWGTTYPILHFVRRFRQFIRSFKLKF---------DAGAGEE-EEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVINDEAARLRAMDG 113 +T +AD IWGT I+ +R FR F+R+FK K+ GAGE+ L ++++H T +N++C++L ++ YH + +YP E + MD+V+ DE L G Sbjct: 173 QTSEADEFTQRFIWGTNISIIDSMRNFRNFLRNFKRKYRMIYNGETVAPGAGEDLVYDEMLKAMKQLHVT---GLNVDCKNLLAFPQTKKFYHQLINYPAEIIPLMDQVVKDEMKELFVRSG 291
BLAST of NO07G00720 vs. NCBI_GenBank
Match: PSC67965.1 (DNA replication licensing factor MCM4 [Micractinium conductrix]) HSP 1 Score: 67.0 bits (162), Expect = 5.000e-8 Identity = 38/110 (34.55%), Postives = 55/110 (50.00%), Query Frame = 0 Query: 5 DADLEGAVIWGTTYPILHFVRRFRQFIRSFKLKFDAGAGEEEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVINDEAARLRAMDGEE 115 D + + IWGT + RF F+R+FK AG ++EP Y+ LL+E A E S N++ +H++ R LY+ YP ETV D + +A L D EE Sbjct: 114 DGEADQTYIWGTNLSVSRVQARFNAFVRTFK-----EAGTDDEPKYMRLLQETRARAEVSFNIDGQHMYEF--DRTLYNWAVTYPAETVPIFDGQLAAISAELEGCDPEE 216
BLAST of NO07G00720 vs. NCBI_GenBank
Match: XP_014179495.1 (DNA unwinding-related protein [Trichosporon asahii var. asahii CBS 2479] >EJT48225.1 DNA unwinding-related protein [Trichosporon asahii var. asahii CBS 2479]) HSP 1 Score: 66.6 bits (161), Expect = 6.600e-8 Identity = 38/127 (29.92%), Postives = 61/127 (48.03%), Query Frame = 0 Query: 3 TGDADLEGAVIWGTTYPILHFVRRFRQFIRSFKLKF-------------DAG--------------AGEEEEPHYLSLLREVHATREYSINLNCRHLWNHLPARRLYHVITHYPQETVSFMDKVIND 103 TGD ++ IWGTT P+ + FR F+R FK K+ DAG + ++P Y + + T + ++NL+ +L + P +RLYH + ++PQE V MD+V+ D Sbjct: 151 TGDDEITEKYIWGTTIPLQTTMNLFRDFLRGFKPKYRAKYNEAQAKAITDAGGIAPPPMPLYDNLSTRDADKPLYEGYIATMRQTGQTNLNLDALNLLAYPPTKRLYHQLVNFPQEMVPIMDQVLRD 277 The following BLAST results are available for this feature:
BLAST of NO07G00720 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00720 ID=NO07G00720|Name=NO07G00720|organism=Nannochloropsis oceanica|type=gene|length=402bpback to top protein sequence of NO07G00720.1 >NO07G00720.1-protein ID=NO07G00720.1-protein|Name=NO07G00720.1|organism=Nannochloropsis oceanica|type=polypeptide|length=134bpback to top Synonyms
Publications
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