NO07G00650, NO07G00650 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00650 vs. NCBI_GenBank
Match: EWM27327.1 (atp-dependent clp protease adaptor protein [Nannochloropsis gaditana]) HSP 1 Score: 148.7 bits (374), Expect = 1.700e-32 Identity = 87/136 (63.97%), Postives = 104/136 (76.47%), Query Frame = 0 Query: 14 PLLVPLLL-----LPTLHAFLLP---FLPSSSSYTSLTSSSTRCFFSSTSSPVMSTVVQPAKPKITPQTDLGPSPVILVVEQTESETQLDGGWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFA 142 PLL P LL LP+L AFL P L + + +SL SS SS +SP STVV+PAKPK+ P TDLGPSPVILVVE+TE+ ++LDGGWELILYNDEVNSRHHVAR+LT+VCQL+DD+AY+VMMTAH+ G A Sbjct: 11 PLLSPFLLGLALILPSLQAFLFPPPHPLRPAPAMSSLRLSS--AVASSPASPTFSTVVEPAKPKVAPGTDLGPSPVILVVEETEARSELDGGWELILYNDEVNSRHHVARTLTSVCQLTDDRAYEVMMTAHRQGSA 144
BLAST of NO07G00650 vs. NCBI_GenBank
Match: OEU20424.1 (hypothetical protein FRACYDRAFT_179929 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 78.2 bits (191), Expect = 2.900e-11 Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 0 Query: 98 WELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKADSPE 175 WE+ +YND +N+R HVARSL + +++ AY MMTAH+NG A VG + E+AE Y EGL GI D+ D + Sbjct: 104 WEVRIYNDGLNTREHVARSLVQITGITEMTAYQTMMTAHQNGIACVGVFCFEIAETYNEGLHKQGIVSDIVPVDEEQ 180
BLAST of NO07G00650 vs. NCBI_GenBank
Match: OEU06024.1 (ClpS-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 76.3 bits (186), Expect = 1.100e-10 Identity = 35/94 (37.23%), Postives = 58/94 (61.70%), Query Frame = 0 Query: 81 VILVVEQTESETQLDG---GWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKAD 172 VI +V+ ++++++ GWE+ L+ND +N R VA+ L +C SD ++Y +MM AHK+G +VG Y E+AE Y L+ G+ D+ + D Sbjct: 81 VIEIVKDSDTKSEEKNGKDGWEIRLFNDPMNHRTFVAKCLNEICGKSDSESYQIMMQAHKSGMGIVGRYAYEIAELYYGSLKAEGLTVDMVQVD 174
BLAST of NO07G00650 vs. NCBI_GenBank
Match: GAX24628.1 (ATP-dependent Clp protease adaptor protein ClpS [Fistulifera solaris]) HSP 1 Score: 76.3 bits (186), Expect = 1.100e-10 Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 0 Query: 45 SSTRCFFSSTSSPVMSTVVQPAKPKITPQTDLGPSPVIL----VVEQTESETQLDG--GWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKAD 172 ++ RC ST++P+ + K +G P +L V E E + G WE+ +YND +N+R HVAR+L V +S+ AY MM AH+NG AVVG + E+AE Y + L+ GI CD+ + Sbjct: 28 AAVRC---STTTPLFMSTATVEK--------VGTGPAVLDRPTVKEAPVEERRRMGSEAWEVRIYNDRMNTREHVARALVQVTGMSEMGAYQTMMQAHQNGIAVVGRWVYEIAEMYHDALKKNGIVCDIVPVE 149
BLAST of NO07G00650 vs. NCBI_GenBank
Match: GAX27921.1 (ATP-dependent Clp protease adaptor protein ClpS [Fistulifera solaris]) HSP 1 Score: 74.7 bits (182), Expect = 3.200e-10 Identity = 45/126 (35.71%), Postives = 66/126 (52.38%), Query Frame = 0 Query: 46 STRCFFSSTSSPVMSTVVQPAKPKITPQTDLGPSPVILVVEQTESETQLDGGWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKAD 172 S RC ++T+ MS P + + + +PV E WE+ +YND +N+R HVAR+L V +S+ AY MM AH+NG AVVG + E+AE Y + L+ GI CD+ + Sbjct: 29 SLRC--TTTTPLFMSAATVERGPAVLDRPAVEETPV------EERRRMGSEAWEVRIYNDRMNTREHVARALVQVTGMSEMGAYQTMMQAHQNGIAVVGRWVYEIAEMYHDALKKNGIVCDIVPVE 146
BLAST of NO07G00650 vs. NCBI_GenBank
Match: XP_002290591.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92343.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 73.6 bits (179), Expect = 7.000e-10 Identity = 37/84 (44.05%), Postives = 51/84 (60.71%), Query Frame = 0 Query: 89 ESETQLDGGWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKADS 173 +S++ D GW + LYND +N R VAR L +C L D AY VMM AH+ G +V+G+Y +EVAE Y L+ G+ D+ S Sbjct: 64 DSKSAKDPGWLVRLYNDPMNKREFVARCLMEICGLDDGAAYTVMMHAHQQGLSVIGKYHREVAELYKMKLQMEGLFVDMVSGTS 147
BLAST of NO07G00650 vs. NCBI_GenBank
Match: XP_002186330.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >ACI65800.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 72.0 bits (175), Expect = 2.000e-9 Identity = 54/158 (34.18%), Postives = 83/158 (52.53%), Query Frame = 0 Query: 15 LLVPLLLLPTLHAFLLPFLPSSSSYTSLTSSSTRCFFSSTSSPVMSTVVQPAKPKITPQTDLGPSPVILVVEQTESETQL-DGGWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKAD 172 L+V LL ++ AF P P +S +S++ S+ S + + V+ P + + P+ V E + + WE+ +YND +N+R HVARSL V +S+ +AY MM AH+NG AVVG + EVAE Y + L+ GI CD+ + Sbjct: 8 LVVLALLGSSVTAFFAPSRPKASFGSSVSRSTVAARMSPAT--IERESVKVGAPAVLDR----PAEKTRVDEPVKERKGMGHEAWEVRIYNDGLNTREHVARSLVQVTGMSEMEAYQTMMQAHQNGIAVVGRWVYEVAEMYHDALQNNGIVCDIVPVE 159
BLAST of NO07G00650 vs. NCBI_GenBank
Match: EJK74221.1 (hypothetical protein THAOC_04111 [Thalassiosira oceanica]) HSP 1 Score: 71.2 bits (173), Expect = 3.500e-9 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 0 Query: 95 DGGWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKADS 173 +G + L +YND +N+R +VA L V S+ +AY M AH NG A VGEY QE+AE Y E L GI CDV +++ Sbjct: 4 NGDYILRIYNDNINTREYVAVCLVQVVGCSEMRAYHTMQDAHHNGIAKVGEYNQEIAECYEEQLNDRGIMCDVVNSNT 81
BLAST of NO07G00650 vs. NCBI_GenBank
Match: XP_005703529.1 (ATP-dependent Clp protease adaptor protein ClpS [Galdieria sulphuraria] >EME27009.1 ATP-dependent Clp protease adaptor protein ClpS [Galdieria sulphuraria]) HSP 1 Score: 70.5 bits (171), Expect = 5.900e-9 Identity = 36/84 (42.86%), Postives = 57/84 (67.86%), Query Frame = 0 Query: 87 QTESETQLDGG--WELILYNDEVNSRHHVARSLTTVCQ-LSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDV 168 Q+ES+TQ D G ++++L+NDE +++ +V +L V ++ DQA ++ TAH G AVVG + E+AE YC+GLR G+G D+ Sbjct: 76 QSESKTQGDPGKPYKVLLFNDETHTKQYVLETLLRVIPGMTQDQAVGIVETAHTTGSAVVGVWIFELAEAYCDGLRSNGLGSDI 159
BLAST of NO07G00650 vs. NCBI_GenBank
Match: CEM02534.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 68.6 bits (166), Expect = 2.300e-8 Identity = 42/124 (33.87%), Postives = 65/124 (52.42%), Query Frame = 0 Query: 51 FSSTSSPVMSTVVQPAKPKITPQTDLGPSPVILVVEQTESETQLDGGWELILYNDEVNSRHHVARSLTTVCQLSDDQAYDVMMTAHKNGFAVVGEYTQEVAEGYCEGLRGVGIGCDVTKADSPE 175 + T S + +V P +P I ++ +P ++T + ++LILYND VN+R HVAR+L V + QA+D MM AH G A+VG + E+AE Y E LR + ++ D + Sbjct: 52 YRPTHSSLRMSVAAPPRPAIEKSPEVITAPSEPARDETPKKAD---KYKLILYNDPVNTREHVARTLCKVVGFDNKQAFDCMMKAHTTGSALVGIWGFELAESYHEALRAHQLVTEIFPVDEDD 172 The following BLAST results are available for this feature:
BLAST of NO07G00650 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 18
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00650 ID=NO07G00650|Name=NO07G00650|organism=Nannochloropsis oceanica|type=gene|length=5839bpback to top protein sequence of NO07G00650.1 >NO07G00650.1-protein ID=NO07G00650.1-protein|Name=NO07G00650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=175bpback to top Synonyms
Publications
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