NO07G00600, NO07G00600 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00600 vs. NCBI_GenBank
Match: XP_005855284.1 (myb-like dna-binding domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >EKU21075.1 myb-like dna-binding domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 229.6 bits (584), Expect = 4.200e-56 Identity = 109/129 (84.50%), Postives = 119/129 (92.25%), Query Frame = 0 Query: 202 SVPIKSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAW 331 ++PIK+GKFSKSESQAIL +VQ YC AH+V+VHRLCSENAHRGDLKGAWL+IAKVLPNRTVQAVYRHGLRKLHSFKRGKW+EEEER+LMELV V G KWVKFQE LNRSADACRDKHREL+TG KAW Sbjct: 74 ALPIKTGKFSKSESQAILHAVQEYCEAHDVSVHRLCSENAHRGDLKGAWLKIAKVLPNRTVQAVYRHGLRKLHSFKRGKWTEEEERKLMELVEVRGQKWVKFQEVLNRSADACRDKHRELATGWAAKAW 202
BLAST of NO07G00600 vs. NCBI_GenBank
Match: EWM27318.1 (myb-like dna-binding domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 229.6 bits (584), Expect = 4.200e-56 Identity = 109/129 (84.50%), Postives = 119/129 (92.25%), Query Frame = 0 Query: 202 SVPIKSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAW 331 ++PIK+GKFSKSESQAIL +VQ YC AH+V+VHRLCSENAHRGDLKGAWL+IAKVLPNRTVQAVYRHGLRKLHSFKRGKW+EEEER+LMELV V G KWVKFQE LNRSADACRDKHREL+TG KAW Sbjct: 209 ALPIKTGKFSKSESQAILHAVQEYCEAHDVSVHRLCSENAHRGDLKGAWLKIAKVLPNRTVQAVYRHGLRKLHSFKRGKWTEEEERKLMELVEVRGQKWVKFQEVLNRSADACRDKHRELATGWAAKAW 337
BLAST of NO07G00600 vs. NCBI_GenBank
Match: EWM27317.1 (conserved unknown protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 173.3 bits (438), Expect = 3.600e-39 Identity = 148/261 (56.70%), Postives = 167/261 (63.98%), Query Frame = 0 Query: 531 KKASGRWSEEEEKHFVDVVCDYLGRPRGTPVTQLPREGINWTEVAHRLQSARSRIHCLNKWGQIQGKFRRLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLESVPRAAPFITTCLHPXXXXXXXXXXXXXXXXXXXXXXXXASNSSTFKLENLNQDLKLLGRLIELAPAEESEVVWSRMPVRNALQRWGKLKAWGQRXXXXXXXXXXXGAMIPVGQGAFVAAVIGI-KGEVEEELRRTVAR 791 ++ SGRWS+EEE F+ VCDYL RPR TP+ +LPREGINWTEVA RL S RSRIHCLNKW Q+QGK RR+EE XXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX NSSTFK+ENL QDL+LL RLIELAPAEESEVVWSR+PVRNALQRWGKLK +R G ++ G A + + + K EV EE+R+T R Sbjct: 14 RRTSGRWSKEEEDQFIHAVCDYLHRPRSTPLAELPREGINWTEVASRLHSTRSRIHCLNKWAQLQGKHRRVEE----------RRRLASVVGDVGLPSGYLNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSSTFKMENLQQDLQLLDRLIELAPAEESEVVWSRLPVRNALQRWGKLKQMLER----GGKGREGGDVLVGGDAASLQKAMQVMKEEVLEEIRKTELR 260
BLAST of NO07G00600 vs. NCBI_GenBank
Match: XP_002182683.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC45970.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 151.8 bits (382), Expect = 1.100e-32 Identity = 70/126 (55.56%), Postives = 94/126 (74.60%), Query Frame = 0 Query: 206 KSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAWR 332 +SGKFSK ES+ + SV+ +CAA ++ RLCSE H+ +LKGAW+EIAK LP+R+VQ+VYRHG+R+LH FKRG WS+ E +L+ELV G KW Q +LNRSAD+CRDK+RE+S + W+ Sbjct: 51 QSGKFSKDESELVRKSVEEFCAAKQISTARLCSECDHKAELKGAWMEIAKQLPHRSVQSVYRHGIRQLHPFKRGAWSDTECTQLVELVQRLGKKWSSIQSKLNRSADSCRDKYREMSDEYVRGRWK 176
BLAST of NO07G00600 vs. NCBI_GenBank
Match: GAX22336.1 (Myb-like DNA-binding protein REB1 [Fistulifera solaris]) HSP 1 Score: 151.8 bits (382), Expect = 1.100e-32 Identity = 70/126 (55.56%), Postives = 92/126 (73.02%), Query Frame = 0 Query: 206 KSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAWR 332 +SGKFSK ES+ I +++ +C +VTV RLCSE H+ +LKGAW+EI+K LP R+VQ+VYRHG+RKLH FKRG W+EEE L +LV G KW Q +LNRSAD+CRDK+RE+S + W+ Sbjct: 30 QSGKFSKEESEKIRNAIEEFCRTRDVTVARLCSECDHKAELKGAWMEISKCLPERSVQSVYRHGIRKLHPFKRGAWTEEETTLLSDLVQRMGKKWSAIQAKLNRSADSCRDKYREMSEEFLKGRWK 155
BLAST of NO07G00600 vs. NCBI_GenBank
Match: GAX10256.1 (Myb-like DNA-binding protein REB1 [Fistulifera solaris]) HSP 1 Score: 151.8 bits (382), Expect = 1.100e-32 Identity = 70/126 (55.56%), Postives = 92/126 (73.02%), Query Frame = 0 Query: 206 KSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAWR 332 +SGKFSK ES+ I +++ +C +VTV RLCSE H+ +LKGAW+EI+K LP R+VQ+VYRHG+RKLH FKRG W+EEE L +LV G KW Q +LNRSAD+CRDK+RE+S + W+ Sbjct: 30 QSGKFSKEESEKIRNAIEEFCRTRDVTVARLCSECDHKAELKGAWMEISKCLPQRSVQSVYRHGIRKLHPFKRGAWTEEETTLLSDLVQRMGKKWSAIQAKLNRSADSCRDKYREMSEEFLKGRWK 155
BLAST of NO07G00600 vs. NCBI_GenBank
Match: OEU18667.1 (hypothetical protein FRACYDRAFT_150307, partial [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 148.7 bits (374), Expect = 9.400e-32 Identity = 67/131 (51.15%), Postives = 93/131 (70.99%), Query Frame = 0 Query: 201 GSVPIKSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAWR 332 G I++GK++K E++ + +V++YCA ++V RLCSE H+ +LKGAW+EIAK LP+R+VQ+VYRHGLR+LH FKRG WS+EE L+ V G KW Q +LNRSAD+CRDK RE+ + W+ Sbjct: 19 GDGAIRTGKYNKEETETVKRAVENYCAVKQISVARLCSECDHKAELKGAWMEIAKELPHRSVQSVYRHGLRQLHPFKRGTWSDEEVEILITSVTQYGKKWASIQTKLNRSADSCRDKFREIDDSYIRGRWK 149
BLAST of NO07G00600 vs. NCBI_GenBank
Match: CBN78226.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 120.2 bits (300), Expect = 3.600e-23 Identity = 55/126 (43.65%), Postives = 85/126 (67.46%), Query Frame = 0 Query: 205 IKSGKFSKSESQAILLSVQSYCAAHNVTVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTGVMGKAW 331 +K GK+S +ES+ ++ +++SY +A+ +TV LC + + K AWL IA LP+R+VQ++YRHG+R+LH K G W++EE +L LV+ +G KW + +++ RSADACRDK REL + W Sbjct: 1 MKGGKYSNTESKIVVDAIKSYASANAITVDSLCQDGSRSVGSKRAWLSIANCLPDRSVQSIYRHGIRQLHGRKMGAWTDEEVAQLKLLVSTHGKKWSEIGKKVGRSADACRDKSRELISTPQEGPW 126
BLAST of NO07G00600 vs. NCBI_GenBank
Match: EJK76359.1 (hypothetical protein THAOC_01880 [Thalassiosira oceanica]) HSP 1 Score: 107.1 bits (266), Expect = 3.100e-19 Identity = 54/125 (43.20%), Postives = 80/125 (64.00%), Query Frame = 0 Query: 204 PIKSGK-FSKSESQAILLSVQSYCAAHNVTVHRLC---SENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFKRGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHRELSTG 325 P+ +G +S+ E + + L+V YC +++VTV +LC H ++GAW IA+ LP+RTV +VYR LR+ H+ RGKWSE+E R L+ LV ++G KW Q++L RSA CR K +L+ G Sbjct: 28 PVFTGSMYSEDEVRTLQLAVHDYCESNDVTVSQLCGGADHTVHNKRIRGAWQVIAQCLPHRTVLSVYRKALRRFHTHTRGKWSEDEIRSLLRLVELHGHKWKSIQDKLGRSATDCRLKFFDLTDG 152
BLAST of NO07G00600 vs. NCBI_GenBank
Match: GAQ91283.1 (hypothetical protein KFL_007580010, partial [Klebsormidium nitens]) HSP 1 Score: 89.7 bits (221), Expect = 5.200e-14 Identity = 49/119 (41.18%), Postives = 69/119 (57.98%), Query Frame = 0 Query: 205 IKSGKFSKSESQAILLSVQSYCAAHNV---TVHRLCSENAHRGDLKGAWLEIAKVLPNRTVQAVYRHGLRKLHSFK-RGKWSEEEERRLMELVAVNGPKWVKFQEELNRSADACRDKHR 320 +K G FSK E + I +V Y N+ + +L + H+ +++GAWLEIA+ LP R+V+ V+ R LH +G+WS EEE RL L A GPKWV+ + R DAC+DK R Sbjct: 201 LKYGAFSKEEDEIIRAAVAEYIEERNLGEDGIEKLLNTRKHK-EVQGAWLEIARCLPERSVKRVHARACRLLHGGNYKGRWSREEEERLQTLHAQLGPKWVQIGSMMGRLPDACKDKWR 318 The following BLAST results are available for this feature:
BLAST of NO07G00600 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00600 ID=NO07G00600|Name=NO07G00600|organism=Nannochloropsis oceanica|type=gene|length=3406bpback to top protein sequence of NO07G00600.1 >NO07G00600.1-protein ID=NO07G00600.1-protein|Name=NO07G00600.1|organism=Nannochloropsis oceanica|type=polypeptide|length=955bpback to top Synonyms
Publications
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