NO07G00580, NO07G00580 (gene) Nannochloropsis oceanica

Overview
NameNO07G00580
Unique NameNO07G00580
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1341
Alignment locationchr7:212479..213819 -

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Properties
Property NameValue
DescriptionProtein FAM98B
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:212479..213819 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR018797FAM98
Homology
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_005854480.1 (hypothetical protein NGA_0238600 [Nannochloropsis gaditana CCMP526] >EKU21877.1 hypothetical protein NGA_0238600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 125.2 bits (313), Expect = 5.200e-25
Identity = 108/344 (31.40%), Postives = 144/344 (41.86%), Query Frame = 0
Query:    5 SLLWEQLQGL-EDASPL-PLLLPLDEAQRAADDGGEAAFASLLRQASAQPFVLGTNDMSSNDKSPILKLADALREGIEELEAAVALAASNGXXXXXXXXVMNVQDNSKSSTSIEAFLTGRGYPYALDNSVDILTFLAAELQVARVLATR---------------------QXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDARLAALPLNYITQDERLVA------------PSPSSTSXXXXXXXXXXXXXXXXQLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKR 314
            SLLW+QLQ L  D + L   LLP+ E QRAA+D GEAAF + L Q  +Q           N++ P+ +LA AL E ++ +E     AA               +  S  ++ I  FL+ RGYPY++D++ DIL FLA ELQ A  LA R                     Q                                                          DARLAALP  +++QDE LV+              P +                  QLTP QR VL DID +LR+DF LRR+M+LKRLDV+L+SFLW ++    +  +V  V   R
Sbjct:   15 SLLWDQLQDLAADENVLSSQLLPVSETQRAAEDEGEAAFQAYLHQNGSQIL---------NEECPLHELARALMEKVQGIETTRNSAA---RATDTDMDHSTTESPSNDTSPILKFLSTRGYPYSVDSAEDILLFLAGELQAASTLAARARSCEGTGGTNATTPVCDTHVQPPLPSLAGSTTKNEEIHGIQRLLTKALDNLQDTSSLSTSTPPLSLPLSSLLGALEKAVDARLAALPPKFLSQDELLVSRVPEKGKEEEGGQCPQNAGAMDEGGSGECPRKSEVQLTPSQRQVLEDIDAHLRNDFGLRRQMVLKRLDVSLRSFLWTERVAEGDTVLVKRVEAAR 346          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_009040048.1 (hypothetical protein AURANDRAFT_66437 [Aureococcus anophagefferens] >EGB05405.1 hypothetical protein AURANDRAFT_66437 [Aureococcus anophagefferens])

HSP 1 Score: 75.5 bits (184), Expect = 4.700e-10
Identity = 48/128 (37.50%), Postives = 67/128 (52.34%), Query Frame = 0
Query:  256 TPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKEL-----VKKLVIGAVPDRGGRANEMRPS 379
            TP+QRA L  +   +R D+ LRRRM+LKR DVT+Q+FLW+  A+G E  IVSAV   R                         + A     E+ +    ++     +K ++IGAVPDRGG A++ RPS
Sbjct:  128 TPEQRAKLEAVRDAMRTDYGLRRRMMLKRCDVTVQAFLWSDSARGNEDAIVSAVAAARDAIGGEPPPLAVDDALAMSRRRARDIAA---RLEQPISATSKVTVDAPMKSVIIGAVPDRGGHAHKQRPS 252          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: KRT82734.1 (hypothetical protein AMK59_3513 [Oryctes borbonicus])

HSP 1 Score: 70.9 bits (172), Expect = 1.200e-8
Identity = 41/127 (32.28%), Postives = 60/127 (47.24%), Query Frame = 0
Query:  255 LTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            LT KQ  +L  +  +L  ++ +RR MLLKRLD T+QSF W+ K KG +  I S    KR                     +++   +    +       K  + +++IG VPDRGGR NE+ P   E
Sbjct:  193 LTDKQWHILNQVLQDLHTEYTIRREMLLKRLDCTIQSFQWSDKMKGKDEMITSVYTEKRKQLRVEPNVSMSDLISAREDLAIIEKTSSASVRRN----TKSAINRVIIGNVPDRGGRTNELAPPPPE 315          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_015122730.1 (PREDICTED: protein FAM98A [Diachasma alloeum])

HSP 1 Score: 70.9 bits (172), Expect = 1.200e-8
Identity = 40/128 (31.25%), Postives = 63/128 (49.22%), Query Frame = 0
Query:  254 QLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            +L+ +Q   +  +   +R +F +RR MLLKRLDVT+QSFLW+ + K  E  + S  + KR                     +++   +    ++      +  V K++IGAVPDRGGR +E  P   E
Sbjct:  192 ELSREQWGKIDQLQEEMREEFTIRREMLLKRLDVTVQSFLWSDRIKAKEGQLTSCYHSKRDKMSSQPSVTISQLLAARDDLAIIEKTSSAAVRKN----TQSSVTKVIIGAVPDRGGRTSEQAPPPPE 315          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_011304752.1 (PREDICTED: protein FAM98A isoform X1 [Fopius arisanus])

HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8
Identity = 38/128 (29.69%), Postives = 65/128 (50.78%), Query Frame = 0
Query:  254 QLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            +L+ +Q   +  +  +++ +F +RR MLLKRLDVT+QSFLW+ + K  +  +++  + KR                     +++   +    ++      +  V K++IGAVPDRGGR NE  P   E
Sbjct:  192 ELSKEQWEKIDQLQKDMKDEFMIRREMLLKRLDVTVQSFLWSDRIKAKQDQLITCYHAKRAKMSSEPSVTISQLLAARDDIAIIEKTSSAAVRKN----TQSKVTKVIIGAVPDRGGRTNEQAPPPPE 315          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_022911066.1 (protein FAM98A [Onthophagus taurus])

HSP 1 Score: 69.7 bits (169), Expect = 2.600e-8
Identity = 42/127 (33.07%), Postives = 61/127 (48.03%), Query Frame = 0
Query:  255 LTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            L+ KQ  VL  +  +L  ++ +RR+MLLKRLD T+QSF W+ K KG E  I    N  R                     +++   +    ++      K  + K++IG VPDRGGR NE+ P   E
Sbjct:  191 LSDKQWHVLEQVQKDLHVEYTIRRQMLLKRLDCTVQSFQWSDKMKGREDQITKTFNETRKQLKIEPDVHISDLLSAREDLAIIEKTSNASVRKH----TKSSINKVIIGQVPDRGGRTNELAPPPPE 313          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_011348157.1 (PREDICTED: protein FAM98A [Ooceraea biroi] >EZA48389.1 hypothetical protein X777_13696 [Ooceraea biroi])

HSP 1 Score: 68.9 bits (167), Expect = 4.400e-8
Identity = 41/128 (32.03%), Postives = 61/128 (47.66%), Query Frame = 0
Query:  254 QLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            +L+ KQ   L D+   +  ++ +RR MLLKRLDVT+QSFLW+ + K  EA + S    KR                     +V+   +    ++      +  +  ++IGAVPDRGGR  E  P   E
Sbjct:  193 ELSAKQWEQLADLQKEMHEEYTIRREMLLKRLDVTVQSFLWSDRIKSQEAKVNSKYEEKRKTMKSEPKVSMADLLAARDDLAVIEKTSNASVRKN----TRSKINSVIIGAVPDRGGRPYEQEPPPPE 316          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_014249690.1 (protein FAM98A-like [Cimex lectularius])

HSP 1 Score: 68.2 bits (165), Expect = 7.500e-8
Identity = 43/118 (36.44%), Postives = 61/118 (51.69%), Query Frame = 0
Query:  254 QLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGR 372
            QL+ KQ   L  I   L+ ++A+RR+MLLKRLDVT+QSF W+++ KG E  I +  + KR                     +++     K +        +  V KL+IGAVPDRGGR
Sbjct:  185 QLSEKQWKSLEKIQQELQQEYAIRRQMLLKRLDVTIQSFQWSERMKGRENEIATHFSEKRNLMTTKPNIKLSDLLAARHHLAILE----KTSNSNVRKNTQSSVNKLIIGAVPDRGGR 298          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_014282273.1 (protein FAM98A [Halyomorpha halys])

HSP 1 Score: 67.8 bits (164), Expect = 9.800e-8
Identity = 41/127 (32.28%), Postives = 63/127 (49.61%), Query Frame = 0
Query:  255 LTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            L+PKQ  +L+ +  +L+ ++ +RR+MLLKRLDVT+QSF W+ + KG E  I      KR                     +V+     K +        +  + K++IG VPDRGGR  + +P   E
Sbjct:  186 LSPKQWTILSQLQDDLKAEYRIRRQMLLKRLDVTIQSFQWSDRMKGKENEIAKLYLDKRKALVDEPSVALSDLLSARAHLAVLE----KTSNANVRKNTQSSLNKVIIGRVPDRGGRPQDQQPPPPE 308          
BLAST of NO07G00580 vs. NCBI_GenBank
Match: XP_008554586.1 (PREDICTED: protein FAM98B [Microplitis demolitor])

HSP 1 Score: 67.0 bits (162), Expect = 1.700e-7
Identity = 41/128 (32.03%), Postives = 61/128 (47.66%), Query Frame = 0
Query:  254 QLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKGVEATIVSAVNGKRXXXXXXXXXXXXXXXXXXXXXSVMYLQACKITQERGVGLGKELVKKLVIGAVPDRGGRANEMRPSKSE 382
            +L+  Q   L  +  ++  ++ +RR MLLKRLDVT+QSFLW+ + K  E  +      KR                     +++   +    ++      K  V K++IGAVPDRGGRANE  P   E
Sbjct:  191 ELSSSQWEKLDQLQKDMNEEYRIRREMLLKRLDVTIQSFLWSDRIKKKEDEVNYCYREKRKELSPEPNVTIPQLLAARDDVAIIEKTSSASVRKN----TKSDVTKVIIGAVPDRGGRANEQAPPPPE 314          
The following BLAST results are available for this feature:
BLAST of NO07G00580 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 15
Match NameE-valueIdentityDescription
XP_005854480.15.200e-2531.40hypothetical protein NGA_0238600 [Nannochloropsis ... [more]
XP_009040048.14.700e-1037.50hypothetical protein AURANDRAFT_66437 [Aureococcus... [more]
KRT82734.11.200e-832.28hypothetical protein AMK59_3513 [Oryctes borbonicu... [more]
XP_015122730.11.200e-831.25PREDICTED: protein FAM98A [Diachasma alloeum][more]
XP_011304752.12.600e-829.69PREDICTED: protein FAM98A isoform X1 [Fopius arisa... [more]
XP_022911066.12.600e-833.07protein FAM98A [Onthophagus taurus][more]
XP_011348157.14.400e-832.03PREDICTED: protein FAM98A [Ooceraea biroi] >EZA483... [more]
XP_014249690.17.500e-836.44protein FAM98A-like [Cimex lectularius][more]
XP_014282273.19.800e-832.28protein FAM98A [Halyomorpha halys][more]
XP_008554586.11.700e-732.03PREDICTED: protein FAM98B [Microplitis demolitor][more]

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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL093nonsL093Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR132ngnoR132Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000818NSK000818Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00580.1NO07G00580.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00580.1NO07G00580.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00580 ID=NO07G00580|Name=NO07G00580|organism=Nannochloropsis oceanica|type=gene|length=1341bp
AACAGAAACATGGCCTCTTTTTCATTGCTGTGGGAACAGCTTCAGGGCCT
TGAAGACGCGTCGCCGCTCCCTTTGCTCCTTCCCCTCGACGAAGCACAGC
GTGCGGCGGACGATGGGGGGGAGGCCGCATTTGCCTCCTTACTGAGGCAA
GCAAGCGCCCAACCATTCGTCCTTGGCACCAATGACATGAGCAGCAACGA
TAAATCCCCAATTCTAAAGCTGGCGGATGCCTTGAGGGAAGGCATTGAGG
AATTGGAGGCGGCAGTAGCATTAGCAGCAAGCAATGGTGGCGCGGCAGCA
AACGGAGCAGCAGTCATGAACGTCCAGGACAACAGCAAGAGTAGCACCAG
TATTGAAGCATTTTTAACAGGACGTGGATACCCTTATGCCCTTGACAACT
CCGTTGATATCCTCACTTTCCTGGCAGCCGAACTGCAAGTGGCGCGTGTC
CTAGCTACTCGCCAAGCCCCTTCCTCCTCCCCCTCCTCCACAAAGACGAA
TAGCGAAATTCAATTCATCTTCCGGATACTCACCAAGGCCCTCAAAAGCC
TCGATATATCCGCTACCTCCTCCTCCGTCCCTCCTTCCGCGTCCCCCTCT
TCTCTCCCCTCCCTCCTCACCCTCGTTGAATCCGCTCTAGATGCCCGGCT
AGCCGCTCTTCCCCTCAATTACATCACGCAAGACGAACGTCTCGTTGCCC
CTTCCCCTTCCTCTACGTCTTCTACCCCCTCCCCCTCCACTACCACCGGC
GTTTCCACGCCCTCCGTACAACTCACACCAAAGCAGAGAGCCGTCCTCAC
CGACATTGACATGAACCTCCGGCATGACTTCGCACTCCGCAGACGCATGC
TTCTCAAACGTCTTGACGTGACCCTTCAGTCTTTTTTATGGGCCCAGAAA
GCAAAGGGCGTGGAAGCGACCATCGTGTCGGCCGTGAATGGTAAAAGGGA
GGGGCTGAGGGAGGAAGCGAGGGAGGACATTGGGGTGGACGCTGGTTTGA
ACGCGGGGAAAAGTGTCATGTACCTCCAGGCCTGTAAGATCACGCAGGAG
AGGGGGGTAGGGTTAGGGAAGGAGTTAGTGAAGAAATTGGTTATTGGGGC
GGTGCCTGACCGGGGAGGGAGGGCGAATGAGATGAGACCGAGTAAGAGTG
AGGGGTGGGGAGGAGGAGGTGGAGGAGGGAGGGGGGGAGGGGAGGGGGAG
GAGGGAGGGGCGGTGGAGGGTGGCGGGGGAAGAAGAAGAGTGGTGGTGGA
GGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGCAGAAAGGGAAGGAGG
AGGGAGGGAAGGAGGAAGGGGAAGAGGGAGAGGGGGGGTAG
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protein sequence of NO07G00580.1

>NO07G00580.1-protein ID=NO07G00580.1-protein|Name=NO07G00580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=444bp
MASFSLLWEQLQGLEDASPLPLLLPLDEAQRAADDGGEAAFASLLRQASA
QPFVLGTNDMSSNDKSPILKLADALREGIEELEAAVALAASNGGAAANGA
AVMNVQDNSKSSTSIEAFLTGRGYPYALDNSVDILTFLAAELQVARVLAT
RQAPSSSPSSTKTNSEIQFIFRILTKALKSLDISATSSSVPPSASPSSLP
SLLTLVESALDARLAALPLNYITQDERLVAPSPSSTSSTPSPSTTTGVST
PSVQLTPKQRAVLTDIDMNLRHDFALRRRMLLKRLDVTLQSFLWAQKAKG
VEATIVSAVNGKREGLREEAREDIGVDAGLNAGKSVMYLQACKITQERGV
GLGKELVKKLVIGAVPDRGGRANEMRPSKSEGWGGGGGGGRGGGEGEEGG
AVEGGGGRRRVVVEEEEEEEEEEEGQKGKEEGGKEEGEEGEGG*
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Synonyms
Publications