NO07G00460, NO07G00460 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00460 vs. NCBI_GenBank
Match: CBJ32730.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 312.8 bits (800), Expect = 2.000e-81 Identity = 184/445 (41.35%), Postives = 263/445 (59.10%), Query Frame = 0 Query: 35 SAVGQEDEGEQKL--QRVRLSYTPTFQRFRAKTRTFTQQYSHMYTNRLRLMRPMLEASAQAKWGTGGM--APTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKGHV-EGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKLNEKSDLLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPFDDSLLR----EKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 +AVG + +L RV L+Y P +QRF K ++FTQQ+SH+Y RL ++ + +A+ +WG G +++++ +G V V+GT +K M LRPS+L+E+R++ +G P ++ S +D+LVLEDESGRVS++GP + V+GLV+AVKG V G + V D C AG+P V + K+ + D L + +L+++V G++G + +RIGR+IV GD +A LL K + A+QQ A P K LD +L LA+A P+DVMPG DP+N TLPQQP+HPCLL +A+R+ + V NP+EA I G+R+FLG SGQ DMARY TP + A LR +E+ L+WRH+APTAP+TL CYPF +DPFV+ P ++F GNQP FATS+LEG Sbjct: 22 TAVGADGARGDELGAPRVELAYEPRYQRFIVKKKSFTQQFSHVYNKRLLALKGAVRQAAEKRWGKEGEGGGVKFVDRLVNMREGDEWV-VIGTTYKAMKLRPSILNEFRED---RGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQSSSLVSGLVIAVKGTVTASGEMLVDDWCPAGIPPP-----------------------VPPSPSKKVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLSGTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRF-GALKRVTNPHEAKI-GERVFLGSSGQPLLDMARYTTPEAEADKDAKPA--CLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATSILEG 435
BLAST of NO07G00460 vs. NCBI_GenBank
Match: XP_005847151.1 (hypothetical protein CHLNCDRAFT_35821 [Chlorella variabilis] >EFN55049.1 hypothetical protein CHLNCDRAFT_35821 [Chlorella variabilis]) HSP 1 Score: 291.6 bits (745), Expect = 4.800e-75 Identity = 174/423 (41.13%), Postives = 237/423 (56.03%), Query Frame = 0 Query: 49 RVRLSYTPTFQRFRAKTRTFTQQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKGHV-EGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKLNE-KSDLLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLE 470 R+ S+TP RF K R + +QYS +Y RL MR E +AQ W P + I V G V + GTL+K+M L+PS+LDEY + + L A + +D L+LEDE R++L G L VGE VTG+V AV+GHV G D+C AGLP Q P G +YV L SG + + +S L L++L++Y+ G +G + + VV RI R++VAG LL D + + +QQ P + +D+ LT+LA+AVP+ +MPGA DP+N TLPQQP+H C+ P AA Y S+ H NP+E + G FLG SGQ +D+ RY S + ++EK L WRHLAPTAPDTLA YP+ ++DPF+L S PHV F G QP F T+L+E Sbjct: 40 RMAASFTPKDNRFLLKNRDYDRQYSQLYYYRLEQMRKHAEEAAQRAW------PGIQVVHILSVPEEGEVAIAGTLYKEMALKPSILDEYVKDRTMSQQLGRA-----RFTQPDDRLILEDEGARLALCGDKLPVGECVTGVVAAVRGHVLPNGDFEALDLCYAGLPPQAPLP------------AVGEDKYVALVSGLGVGDGESSPLRLELLVDYLSGLLGGEQERGQVVGRIARVVVAGGLLKSNADLSQPTAYSSVRQQAAALGPVRDVDMALTELAAAVPLGIMPGAGDPANYTLPQQPLHRCMFPGAAAY-STLHRATNPHEFELDG-VTFLGTSGQNVDDVCRY-----------SELEDRVTILEKLLRWRHLAPTAPDTLAAYPYFNNDPFILRSTPHVLFAGGQPQFGTALVE 426
BLAST of NO07G00460 vs. NCBI_GenBank
Match: EWM27298.1 (polymerase (dna directed) delta regulatory subunit [Nannochloropsis gaditana]) HSP 1 Score: 288.9 bits (738), Expect = 3.100e-74 Identity = 152/208 (73.08%), Postives = 171/208 (82.21%), Query Frame = 0 Query: 1 MAGGGDVVDVPSGSSIRITTAMLDNILRNGEENPSAVGQEDEGEQKLQRVRLSYTPTFQRFRAKTRTFTQQYSHMYTNRLRLMRPMLEASAQAKWGTGGM-------APTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKGHVEGG 202 MAGGGD VD+ S SS+ + AMLD+IL+NGEE+P + E+KLQRV LSYTPT+QRFRAK RTFTQQYSHMYTNRLRLMRPMLEA+A AKWGTG APTLC+K+IDLVDGA T MV+GT+FKDMPLRPSLLDEYRDEAALQGALQPA GP+TNY S EDTLVLEDESGRV+L+G +L VG+FVTGLVVA KG GG Sbjct: 1 MAGGGDFVDM-STSSVITSDAMLDSILQNGEEDPGNQDGRERSEEKLQRVTLSYTPTYQRFRAKARTFTQQYSHMYTNRLRLMRPMLEAAATAKWGTGAPDGKEGEDAPTLCQKIIDLVDGARTSMVIGTIFKDMPLRPSLLDEYRDEAALQGALQPAPGPDTNYTSSEDTLVLEDESGRVTLSGEALPVGDFVTGLVVAAKGRAVGG 207
BLAST of NO07G00460 vs. NCBI_GenBank
Match: XP_005899474.1 (PREDICTED: DNA polymerase delta subunit 2 [Bos mutus] >XP_014334805.1 PREDICTED: DNA polymerase delta subunit 2 [Bos mutus] >ELR53777.1 DNA polymerase delta subunit 2 [Bos mutus]) HSP 1 Score: 281.2 bits (718), Expect = 6.500e-72 Identity = 180/425 (42.35%), Postives = 249/425 (58.59%), Query Frame = 0 Query: 52 LSYTPTFQRFRAKTRTFTQQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKGHV-EGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKL--NEKSDLLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLA---PFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 ++YT + Q FR R+F++QY+H+Y RL MRP L + AQ +WG+G L KK+ +L G VVGTLFK MPL+PS+L E +E L QP P + Y+ +D L+LEDE R+ L G ++ V + VTG V+AV G V + G V D C AGL Q+ A ++ + R+VLL SG L LL Q+L++ V G +G D ++ + + R+I+AG+LL+ DS+ + K++T K Q K LD +L QL+++VP+DVMPG DP+N TLPQQP+HPC+ P A Y S+ V NPY+A I G R FLG SGQ D+ RY SS L ++E TL+ RH++PTAPDTL CYPF DPF+ P PHVYF GN P+F + +++G Sbjct: 30 VTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAQQRWGSG----VLVKKLCELQPGE-KCCVVGTLFKAMPLQPSILREVSEEHNL--LPQP---PRSKYIHPDDELILEDELQRIKLEG-TIDVSKLVTGTVLAVLGSVGDDGKFLVEDHCFAGLAPQK------PACPLDTD------RFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLG-DEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQLVTNPYQATIDGVR-FLGTSGQNVSDIFRY-----------SSMEDHLEILEWTLQVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIQG 417
BLAST of NO07G00460 vs. NCBI_GenBank
Match: OVA13065.1 (DNA polymerase alpha/epsilon [Macleaya cordata]) HSP 1 Score: 281.2 bits (718), Expect = 6.500e-72 Identity = 178/434 (41.01%), Postives = 250/434 (57.60%), Query Frame = 0 Query: 40 EDEGEQKLQRVRLSYTPTFQRFRAKTRTFT-QQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKG-HVEGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKL-NEKSDLLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 E +G LQR + Y +RF + +T QQYS +Y RL MR +L S KW T V+ + +G + +VGTL+K M L+P +LDEY E + ++P N++ +D L+LEDESGRV L G LA +VTG+VVAV G G V D+ GLP Q E P + +YV+L SG + N KS+ L LQ+L++++ GH+G + +R + S+I R+++AG+ + LL + + AK Q + P K LD++LTQLA+AVP+D+MPG+ DP+N +LPQQP+H CL P A+ Y ++F + NP+ + R FLG SGQ +D+ +Y S A L ME+TL W HLAPTAP+TL CYPF D DPF++ S PHVYFVGNQ + T LL+G Sbjct: 5 EVDGASNLQRKQSLYQSKDERFEIRMEKYTGQQYSQIYFARLHKMRTLL-YSLVDKWKPHVPVCT----VLGIEEGKECI-IVGTLYKHMKLKPCILDEYSKERSAVPVVKP-----HNFMHPDDQLILEDESGRVKLGGTVLAASNYVTGVVVAVHGKETVSGEFFVQDILERGLPHQIELPLDSR-----------EDKYVVLVSGLSVGNGKSNPLNLQLLVDHITGHLGDEKEQR-IASQIVRVVIAGNSV-EIPHGLLNGQTLAAKDQSKLSEPIKELDILLTQLAAAVPLDIMPGSSDPANFSLPQQPLHRCLFPGASVY-NTFMSCTNPHSFELDSVR-FLGTSGQNIDDLEKY-----------SEAKDKLDFMERTLRWIHLAPTAPNTLGCYPFTDRDPFLIESCPHVYFVGNQIKYETRLLKG 401
BLAST of NO07G00460 vs. NCBI_GenBank
Match: XP_020260121.1 (DNA polymerase delta small subunit [Asparagus officinalis]) HSP 1 Score: 280.4 bits (716), Expect = 1.100e-71 Identity = 170/429 (39.63%), Postives = 253/429 (58.97%), Query Frame = 0 Query: 47 LQRVRLSYTPTFQRFRAKTRTFT-QQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKG-HVEGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKLNEKSDL---LPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 L+R + +Y +R+ + QQYS +Y RL MR +L +S KW P + + ++ +++GT++K M L+P +LDEY E ++ ++P N++ +D LVLED+SGRV L G ++ FVTG+V+A+ G GG V D+ AGLP Q E P + +YV+ SG LN SD L Q+L+++V GH+G D +++++ S+I RL++AG+ + LL +++ +K + P K LD++LTQLA+A+P+D+MPG++DP+N +LPQQP+H CL P A+ Y ++F + NP+E + G R FLG SGQ ED+ +Y S A L ME+TL WRHLAPTAP+TL CYP+ D DPF+L S PHVYFVGNQ + TS+L+G Sbjct: 15 LERKQATYRSLDERYEIHGERYKGQQYSQIYFTRLHHMRNLL-SSVTPKW-----KPHVPVNTVLELEAGKECIIIGTIYKHMKLKPCVLDEYSKERSVVPLVRP-----HNFMHPDDYLVLEDDSGRVKLTGELVSPSTFVTGIVLALHGKETGGGEFLVQDILEAGLPPQIERPHDSR-----------EDKYVVFVSG--LNVGSDTFNPLQFQLLVDHVTGHLG-DENEQEIASQIVRLVIAGNSV-EISQCLLTGQNIASKDHAKLSEPIKELDILLTQLAAAMPVDIMPGSNDPANFSLPQQPLHRCLFPGASVY-NTFLSCTNPHEFELDGAR-FLGTSGQNIEDLDKY-----------SDAKSKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFLLESCPHVYFVGNQHKYETSVLQG 404
BLAST of NO07G00460 vs. NCBI_GenBank
Match: NP_776853.2 (DNA polymerase delta subunit 2 [Bos taurus] >XP_015325451.1 PREDICTED: DNA polymerase delta subunit 2 isoform X1 [Bos taurus] >XP_015325452.1 PREDICTED: DNA polymerase delta subunit 2 isoform X1 [Bos taurus] >XP_019814511.1 PREDICTED: DNA polymerase delta subunit 2 [Bos indicus] >XP_019814512.1 PREDICTED: DNA polymerase delta subunit 2 [Bos indicus] >XP_019814513.1 PREDICTED: DNA polymerase delta subunit 2 [Bos indicus] >P49004.2 RecName: Full=DNA polymerase delta subunit 2; AltName: Full=DNA polymerase delta subunit p50 >AAI13316.1 Polymerase (DNA directed), delta 2, regulatory subunit 50kDa [Bos taurus] >DAA30470.1 TPA: DNA polymerase delta subunit 2 [Bos taurus]) HSP 1 Score: 279.6 bits (714), Expect = 1.900e-71 Identity = 179/425 (42.12%), Postives = 248/425 (58.35%), Query Frame = 0 Query: 52 LSYTPTFQRFRAKTRTFTQQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKGHV-EGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKL--NEKSDLLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLA---PFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 ++YT + Q FR R+F++QY+H+Y RL MRP L + AQ +WG+G L KK+ +L G VVGTLFK MPL+PS+L E +E L QP P + Y+ +D L+LEDE R+ L G ++ V + VTG V+AV G + G V D C AGL Q+ A ++ + R+VLL SG L LL Q+L++ V G +G D ++ + + R+I+AG+LL+ DS+ + K++T K Q K LD +L QL+++VP+DVMPG DP+N TLPQQP+HPC+ P A Y S+ V NPY+A I G R FLG SGQ D+ RY SS L ++E TL+ RH++PTAPDTL CYPF DPF+ P PHVYF GN P+F + +++G Sbjct: 30 VTYTNSSQPFRLGERSFSRQYAHIYATRLIQMRPFLVSRAQQRWGSG----VLVKKLCELQPGE-KCCVVGTLFKAMPLQPSILREVSEEHNL--LPQP---PRSKYIHPDDELILEDELQRIKLEG-TIDVSKLVTGTVLAVLGSAGDDGKFLVEDHCFAGLAPQK------PACPLDTD------RFVLLVSGLGLGGGGGESLLGTQLLVDVVTGQLG-DEGEQCSAAHVSRVILAGNLLSHNTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQLSASVPVDVMPGEFDPTNYTLPQQPLHPCMFPLATAY-STLQLVTNPYQATIDGVR-FLGTSGQNVSDIFRY-----------SSMEDHLEILEWTLQVRHISPTAPDTLGCYPFYKTDPFIFPECPHVYFCGNTPSFGSKIIQG 417
BLAST of NO07G00460 vs. NCBI_GenBank
Match: XP_002607199.1 (hypothetical protein BRAFLDRAFT_68004 [Branchiostoma floridae] >EEN63209.1 hypothetical protein BRAFLDRAFT_68004 [Branchiostoma floridae]) HSP 1 Score: 279.3 bits (713), Expect = 2.500e-71 Identity = 185/431 (42.92%), Postives = 243/431 (56.38%), Query Frame = 0 Query: 48 QRVRLSYTPTFQRFRAKTRTFTQQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGAL-QPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKG-HVEGGVLTVADVCVAGLPSQE--EGPEEGAAVEVEGEGGGGNPRYVLLASGFKLNEKSD-LLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPF---DDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 +R + SY QRF K R F +QY+H+Y RL M+ L+ +A+ KWG KK+ ++ G T +V+GTLFK M L+PS+L E +E +GA+ QP P Y D L+LEDE RVSLAG L V VTG +VAV G E G V D C +P Q+ + PEE R+V+L SG + D LL LQ+L++ V G +G D + + I R+I+AG+ L+ DSL + K+++ K K LD L QL+S V +DVMPG DP+N LPQQP+H C+ P A +Y + HTVPNPYEA +GG R FLG SGQ ED+ +Y SS +L ++EKTL HLAPTAPDTL YPF + DPF+L S PHVYF GNQ F + +LEG Sbjct: 13 ERAQCSYENLSQRFMLKQRNFGRQYAHIYAVRLWEMKDRLKKAAKRKWGVD------AKKLSEMETGE-TCVVIGTLFKHMELKPSILKEISEE---EGAMPQP---PRAKYTEDADNLILEDEVQRVSLAG-KLDVQSSVTGTIVAVYGAEDESGKFQVKDFCYVDMPVQDSLQTPEE--------------DRFVVLVSGLGIGSSQDNLLELQLLVDLVTGQLG-DVGDQKSAANIVRVIMAGNSLSESTQDKDSLTKAKYLSRKTAAGSVEAMKVLDDFLVQLSSCVDVDVMPGDFDPANHVLPQQPLHRCMFPRAMKY-PTMHTVPNPYEADVGGVR-FLGTSGQNIEDIYKY-----------SSLENSLEILEKTLTVGHLAPTAPDTLGSYPFHESDPFILKSCPHVYFAGNQAKFQSKVLEG 401
BLAST of NO07G00460 vs. NCBI_GenBank
Match: ONK71042.1 (uncharacterized protein A4U43_C04F4110 [Asparagus officinalis]) HSP 1 Score: 279.3 bits (713), Expect = 2.500e-71 Identity = 166/405 (40.99%), Postives = 243/405 (60.00%), Query Frame = 0 Query: 70 QQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKG-HVEGGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKLNEKSDL---LPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 QQYS +Y RL MR +L +S KW P + + ++ +++GT++K M L+P +LDEY E ++ ++P N++ +D LVLED+SGRV L G ++ FVTG+V+A+ G GG V D+ AGLP Q E P + +YV+ SG LN SD L Q+L+++V GH+G D +++++ S+I RL++AG+ + LL +++ +K + P K LD++LTQLA+A+P+D+MPG++DP+N +LPQQP+H CL P A+ Y ++F + NP+E + G R FLG SGQ ED+ +Y S A L ME+TL WRHLAPTAP+TL CYP+ D DPF+L S PHVYFVGNQ + TS+L+G Sbjct: 104 QQYSQIYFTRLHHMRNLL-SSVTPKW-----KPHVPVNTVLELEAGKECIIIGTIYKHMKLKPCVLDEYSKERSVVPLVRP-----HNFMHPDDYLVLEDDSGRVKLTGELVSPSTFVTGIVLALHGKETGGGEFLVQDILEAGLPPQIERPHDSR-----------EDKYVVFVSG--LNVGSDTFNPLQFQLLVDHVTGHLG-DENEQEIASQIVRLVIAGNSV-EISQCLLTGQNIASKDHAKLSEPIKELDILLTQLAAAMPVDIMPGSNDPANFSLPQQPLHRCLFPGASVY-NTFLSCTNPHEFELDGAR-FLGTSGQNIEDLDKY-----------SDAKSKLEFMERTLRWRHLAPTAPNTLGCYPYTDKDPFLLESCPHVYFVGNQHKYETSVLQG 469
BLAST of NO07G00460 vs. NCBI_GenBank
Match: XP_024369612.1 (DNA polymerase delta small subunit-like isoform X1 [Physcomitrella patens] >PNR58077.1 hypothetical protein PHYPA_005072 [Physcomitrella patens]) HSP 1 Score: 279.3 bits (713), Expect = 2.500e-71 Identity = 172/427 (40.28%), Postives = 251/427 (58.78%), Query Frame = 0 Query: 47 LQRVRLSYTPTFQRFRAKTRTFT-QQYSHMYTNRLRLMRPMLEASAQAKWGTGGMAPTLCKKVIDLVDGAGTVMVVGTLFKDMPLRPSLLDEYRDEAALQGALQPAAGPNTNYVSGEDTLVLEDESGRVSLAGPSLAVGEFVTGLVVAVKGHVE-GGVLTVADVCVAGLPSQEEGPEEGAAVEVEGEGGGGNPRYVLLASGFKL-NEKSDLLPLQMLIEYVQGHVGSDAHKRDVVSRIGRLIVAGDLLAPFDDSLLREKHMTAKQQEDFALPFKHLDLVLTQLASAVPMDVMPGADDPSNSTLPQQPIHPCLLPHAARYASSFHTVPNPYEAWIGGDRLFLGGSGQVPEDMARYMTPPSLPPSPTSSAARALRLMEKTLEWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFVGNQPAFATSLLEG 471 + R+ Y Q++ + + QQYS +Y R+ +R L Q +W P+L I ++ +V+GTL+K M L+PS+LDEY E ++ P A PN + +D L+LEDESGRV L G ++ +VTG+VVA+ G E G V DV VAGLP Q+ P + + V+ ++VL SG K+ ++ L LQ+L++++ GH+G + ++ + S+I R+++AG L S+ + M+AK Q P K LDL LTQ+++A+P+D+MPGA+DP+N +LPQQP+H CL P A Y ++F + NP++ + D LFLG SGQ +D+++Y S A L ME+TL WRHLAPTAPDTL CYPF D DPF+L + PHVYF GNQP +A+ LL G Sbjct: 13 IPRLHAPYVSQDQKYGLSMQRYKGQQYSQLYFIRIVTIRQHLTPCIQERW------PSLPVCNILALEEDKACVVIGTLYKQMQLKPSVLDEYSKER----SVVPLASPN-KFTHKDDYLILEDESGRVKLTGSAVLSSMYVTGVVVAIVGREEKDGEFFVEDVMVAGLPPQK--PLKNSDVD----------KFVLFVSGLKIGGHGTNPLDLQLLVDHLTGHLG-EVQEQSLSSQIVRMVIAGGSL-DLQTSISNGQPMSAKNQSKLVEPVKELDLALTQISAAMPVDIMPGANDPANFSLPQQPLHKCLFPGATMY-NTFVSATNPHQFEL-DDVLFLGTSGQNIDDLSKY-----------SEAEDRLDFMERTLMWRHLAPTAPDTLGCYPFIDRDPFILETCPHVYFCGNQPHYASRLLTG 401 The following BLAST results are available for this feature:
BLAST of NO07G00460 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00460 ID=NO07G00460|Name=NO07G00460|organism=Nannochloropsis oceanica|type=gene|length=2504bpback to top protein sequence of NO07G00460.1 >NO07G00460.1-protein ID=NO07G00460.1-protein|Name=NO07G00460.1|organism=Nannochloropsis oceanica|type=polypeptide|length=512bpback to top Synonyms
Publications
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