NO07G00430, NO07G00430 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00430 vs. NCBI_GenBank
Match: EWM27338.1 (Thioesterase superfamily [Nannochloropsis gaditana]) HSP 1 Score: 434.5 bits (1116), Expect = 3.400e-118 Identity = 227/372 (61.02%), Postives = 268/372 (72.04%), Query Frame = 0 Query: 6 PRLFAAIKNHSKHADALEFTQLFHSINFAHTLRVSEAELVRYDIKEGLETTHAITPYLCRTDSRGTYLSVGVITALFDEISTAACILQDKTHRPGVSVSLVVEVLANVAPGRTLLLKTWADKLGKSLAFLRLDLRDAVTGQLVAVGKHCKMLPMAGVPFWDAAFAPFLYPFLKRPLMGLTRNHVAQGERVDWHGAASLYDYFPLDDLVLSGNGGGVGGVDDGRDGGKVEGKATTTASLHVQPRHCNGLFKMHGGALAVVAEDVAVRDVAARLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSMHYLQANSKMVDVAAW-VNDAPHIKG--KGGEEVPCMSLGLSSQIEVRRGGKLCNHGTILWQ 375 P L AA+K S+H DALEFTQLFHSINFAHTLRVS+A L RYD K+GLETTH IT YLCRTD GTYLS GVITA+FDEISTAACILQD+THRPGVSV+L VEV+AN+ PGR+L LKTWADK+GKSLAFLRLDLRDA + QLVAVGKHCK LPMAGVPFWD AF P LYP +++ L+GLTR HVA GERV+ H A+S++D+FPLD+L L D G + +++ T ASLHV+PRHCNGLFKMHGGALAV AE++A+ DVAAR LS+HYLQAN ++VD+AAW + DA G +GG++ GL +QIEVRRGGKLCN G+I+WQ Sbjct: 5 PSLIAALKQSSRHEDALEFTQLFHSINFAHTLRVSDAVLERYDAKKGLETTHEITKYLCRTDEGGTYLSAGVITAIFDEISTAACILQDRTHRPGVSVALDVEVMANITPGRSLRLKTWADKIGKSLAFLRLDLRDAASDQLVAVGKHCKYLPMAGVPFWDMAFTPLLYPIVRKSLLGLTRRHVATGERVNTHDASSIFDHFPLDNLTLENES------DKGDERQRLQ---ATRASLHVKPRHCNGLFKMHGGALAVAAEEIALLDVAAR------------------------KKESTSQAPRARALSLHYLQANDRVVDLAAWTLQDACEKSGGEEGGDD------GLLTQIEVRRGGKLCNSGSIIWQ 337
BLAST of NO07G00430 vs. NCBI_GenBank
Match: EWM28873.1 (acyl-coenzyme a thioesterase 13 [Nannochloropsis gaditana]) HSP 1 Score: 78.6 bits (192), Expect = 4.700e-11 Identity = 63/215 (29.30%), Postives = 92/215 (42.79%), Query Frame = 0 Query: 73 LSVGVITALFDEISTAACILQDKTHRPGVSVSLVVEVLANVAPGRTLLLKTWADKLGKSLAFLRLDLRDAVTGQLVAVGKHCKMLPMAGVPFWDAAF----APFLYPFLKRPLMGLTRNHVAQGE-------------RVDWHGAASLYDYFPLDDLVLSGNGGGVGGVDDGRDGGKVEGKATTTASLHVQPRHCNGLFKMHGGALAVVAEDVAV 271 L G +TA FDE+S+ A + D HRPGVSVSL VL+ V G + +++ K+G++L F + L D TG+ +A G+H K L M W A P Y L+ R + R + A ++ LD+ + G V +AS V P+ CN +HGGA A++AE A+ Sbjct: 88 LDAGAVTAWFDEVSSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFADMMLLDVATGKELAHGRHVKFLKMGTA--WTVAMHAWAFPLTYLMASAVLLPSVRQRTQKSSSFPPEMAPSPDLPRTEPGSAVNINRLLALDNFHVYEPAGAAS--PPLAFPASVPLTMEASASFRVIPQVCNSFGSLHGGAAAILAERAAL 298
BLAST of NO07G00430 vs. NCBI_GenBank
Match: XP_005853925.1 (thioesterase superfamily member 2 [Nannochloropsis gaditana CCMP526] >EKU22436.1 thioesterase superfamily member 2 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 72.8 bits (177), Expect = 2.600e-9 Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0 Query: 59 ITPYLC-RTDSRGTYLSVGVITALFDEISTAACILQDKTHRPGVSVSLVVEVLANVAPGRTLLLKTWADKLGKSLAFLRLDLRDAVTGQLVAVGKHCKMLPMAGVPFWDAAFAPFLYP 176 + +LC D+ L G +TA FDE+S+ A + D HRPGVSVSL VL+ V G + +++ K+G++L F + L D TG+ +A G+H K L M W A + +P Sbjct: 73 VPSHLCDNYDNNHCLLDAGAVTAWFDEVSSWAFVSADGRHRPGVSVSLNTTVLSWVPVGTEVEIQSHCKKIGETLGFADMMLLDVATGKELAHGRHVKFLKMGTA--WTVAMHAWAFP 188 The following BLAST results are available for this feature:
BLAST of NO07G00430 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 3
Relationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00430 ID=NO07G00430|Name=NO07G00430|organism=Nannochloropsis oceanica|type=gene|length=1131bpback to top protein sequence of NO07G00430.1 >NO07G00430.1-protein ID=NO07G00430.1-protein|Name=NO07G00430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=377bpback to top Synonyms
Publications
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