NO07G00390, NO07G00390 (gene) Nannochloropsis oceanica

Overview
NameNO07G00390
Unique NameNO07G00390
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3784
Alignment locationchr7:147242..151025 +

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:147242..151025 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G00390 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000862NSK000862Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00390.1NO07G00390.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00390.1NO07G00390.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00390 ID=NO07G00390|Name=NO07G00390|organism=Nannochloropsis oceanica|type=gene|length=3784bp
ACAGGCCTGACGCTCTCTCGAGCCGATGATGTTCGATGATTTCTTCCCCT
TCCTGCCGGACTCGGCCTCCTCCTTTACCCCTGCGCACTCCGAGACCAGC
GCAAAGAAAAAGCGCAAGCCCCGCAAATCCAAGGCACCGTCCACCTCTAC
TTCTACTCCAATTAATTCCTCAACCTCAGCCCCGGGTGCGTCAGCGCCTG
TACCTCCTACCGCACATGGTGCCAGCAATGGGTCTTCCCCCCCCATTTCG
TCCCCCGCCGCCCCCGCCAGCAAAAAGCGGAAGAAGGAGCATTTACCCAA
CACCATTCCTCGCGCCCCCCATCCGTCCGCCTCCCCTTTCATACAGCTTT
TCCTTGTCGTTGATGGCCAGCACAAGCTCGGGTTAATGATGCCCCGCTTG
GCTACGGTCAAGCAATTGAGCGAGACGGCCCTAGGCTGCTACCAAGCCTG
GCGGGAAGACCATCTTGTGATGCCCGCAGCTGTAGCAGCTGCTTGTGCTG
GTGCTATTCCTCCCCCTTCTCCTCGCCACAGGGGAAATGGCAATACCAGC
AGCAGCAACAACAAGGGATGGAAGAAACGTCTGTGCGTCACCAGCATCGG
AACTTGGAACGCCTTCACCTCCATGCCTGCCTCCTCCTCTTCCTCCCCCT
CTCCGTCCTTTGCCGCCCTTTTCTCCTCTCTCCGTCAAATCACTCCCCGC
ACCCTGCAACTCGGCAAACCCCACTGCTGGCGGCTCCTCTCGAACCCCAA
AGCCCTTGTTGGGGACGAGCTGGCGGATACAGGGGTCGTCATGATGAGAA
CAGACGGCCGCCCCTTGCACGCCAACCCCCCCTCCTCTCCAGCAGCGGCT
GCCTCGCCCTCCCTCCCGCTCTCCCTCCCCGCCATGGCGGCCCCTGCTGT
TTCGATGAACGGGCAAAATGAGAAGAATGGAGATAGAGAAGGAGGCGGAA
AGGAAGCAGCGACCAAGTCCAAGAAGGCTGCTGCTGCTGCTGCTGCTGCT
GCTGCTGCTGCTACTCCCACAACCACCACCACGACCCCAGTAGCAGTGGC
AGCAGAAAAGAGCAGCCCAACCAAGCCTCCCCTCCCCCCCTCTGTTGTTG
TCACGACCACACCAGGCGGTCGTTCATCAGACCACCTCATTGATCCTCCT
GAGAAGGCGGGGCTAGGGATGCCTGCCTGGCTTCGGTACTTACACGGCGC
CACTACCCTGGAGCCAAGGAAAGCGAATCGATTCATGAGGCACATAGATG
CGGCCTTGAAGGCTCTGAAGGAGGGAGGGAGGGAGGAAGGGAGGATTGCC
CTAGGGCTGGAGACGGTGAGGAGGAAGTGTGGGACATCGAGAGTTGGGCA
TGCGAAAGAGGCTCTGGTTGCCCTATTAGAGAGTGTGAAGGAGGAGGAAT
GGAGGGAGGAGGGGTTGGTGGCGGGCGACAAGAAGCAGCAGAATAAGAAA
GGGAAGGTGGCTATTGCGGCGGTGGAGGAGCATGAGGATGGCTGTAGTGA
TAGTAGCAGTGGAAGCGGCAGCAGCAGCAGTGACAGCAGCAGCAGTAACA
GCAGCAGCAGCAGCAGTGACAGCAGCAGCAATGGCGGCGGCAGCAGCAGC
AGCAGCAGCAGCAGCGGCAGCGGGAGTGACAGTGAAGCATCGTCGGAATC
GGAGTTGGAGGCGGAGAAGAAGGCAGGGAAGAATAAAGCCACTGGGATTA
CAGAAGTAGGAGGAAAAGGTACAGCAGTGCCGGCGAACAAGACGCCGGGG
AGGGTAGCGACGGTGGCAGCAGCAGCAGCAGCAGCTACAGCAGCAACCCA
AAACAATGGGAAGAAAGCGGAAAAAATGCAGCAGCAGCCGCAGCAGCCAC
AACAACCACAGCAGCAACAGGAGGGAAAGAAGGTAGTGGCGGAGCCATCT
GCTCAGCCTGCAAACACGAAAGATCAGAAGGGCGATACCTCCTCATCGTC
GTCACCCTCTTCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCCTCCT
CATCTGATTCTGACTCATTCCTTGGAGGAGAGGACAGTAGTAGTGACGAA
GAGGAGATGCCAACGTCGAAGCCAGCAGTAGAAGAAGCGGCTCAGAAGAG
GGAGGTTGCTCCTCTGACCCCGACGACCAAAGGAGTAGGAGGAGGTGCAC
AGAATGGGGTGGTAGCAGCAGGAGGAGAAAAAGTAGCAGCAGCAACAGCA
CTGTCGCCTGCTAGATCGGTTGCTCTGAAAGCGGCGGCGGCAGAGAAGAA
GGTGGAGGAGCAGGAGGAGAAAAAGAAGGAGGAGGAGGGAGAGGAGGAGT
ACTCTGGCAGTGAGAGTGAGAGTGAGAGGGAAGAAGGCTCCTCCTCCTCC
TCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCTCCTCCTCCTCCTCCTC
CTGGAGCGATTATGATGATGATGATAATAATGGTGAAAAGAAGGAGGAAA
GGGAGGGACTTGGAAAGGAGAAAGCCGTTGCGGCCTCCGTGCGGCCTAAA
TTCCTTGTCTCTACCCCTGCTGATGCTGCTACTGCTGATCCTGCGGCTGT
GGTGCATCGCCTACATCCATCTTATACAGGTTTGAAGAAGAATGAAGGAA
GAGTCCAGGAAAAGATGTCGGCAAACAGCGATGAGAGCAGTGAAGGGGAA
GAGGAGGAGGAGGGGGAGAAAACTCATTTTGACGGAAAGGAAGATACCAA
GGAGGCGGTGGAAAGACAAGCGCCTAGGAGCAGCAGTAGCAGCAGTAGCA
GCAGTAGCAGCAGCAGTAGTGACGAGGAGGGAGAGGGAGAGGAAGGGAAA
AAGAGGAGGGCCCCGGTGGCTGTGGTCACTGCGCACCGGCAGAAGAAGAA
CGAAGGGATGATGACTGGCACGACCCGACCTGCCTCCCTCGATTCCTCGG
CCTCGTCTCCATCCTCGTCCTCCTCCTCCTCTTTTGAAGATGAGGGGGAG
GAAGAGGAAGGGGAGAATGCGGTGAAGAGCAGTAGCAGCACGGGCAGCAA
GGTGGCAGCGACCAACCAGAGAGGAGCAAATGCCTCTGGTACCGGCAAGT
ATCAGCAGCAGCAGCAGCAGCAGCAGCGACGCACTTCGTCGGTTGCCCCT
CAAGACCAAGACGTGCTCTTCAGCCTCCTCAACGGCTTCACAGCACCTTC
CGCCATCCCGCCCTCCCGTCGTACCTCCCTCCCGACCTCCCTCCCTCCCG
CCACCACAGCCACCACAAGCAGCACCGGCAGCAGCAGCGAGGACAGCAAA
AAGAAGAAGCGGAAAACACTTCCTGCCAACAGCACCGGCATCATCGCTCC
TTCCCTTCCTCCTCCTTCCTCCTCCTCCTCCTCCTTCTCCTCCTCCTCCT
CCTCCTCCTCCTCCACTCCCACCGTGACCAAGGCCGTAACAGCAGCAGGG
CCAGCAGCACCAGCAGTGCCAGCAGCATCGACATTAAATACAACAGCGAA
GAAGGCTATTGCTGCAGGTACCATTGCCACTACTACAACTATTTCTGCTG
CTTCTGCTGCTGCTGCTGCTGCTCCTCCTCCTCCTACTCGTCGCACCACG
CGTGCTGCTGCTACTGCCGCCGCCATCGAGAAGAAGAGAGGGGGAGGGAA
GAACGGTGAGAAGGAGGACGGAGAGGAGAGGGAGACACGGGCTCTGTCTA
CTCGGGTCGTGAAGAAGAGAGGAGCACCCGCAGCAGCAGCGACAACAGCA
TCAGCAGCTGGAATGACAAGGGAAAGGGCGTCTCTTAGGACGGCCACGCC
GGAGAGGGCGGGGAAGAGGACGAAGAGGCGCTAG
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protein sequence of NO07G00390.1

>NO07G00390.1-protein ID=NO07G00390.1-protein|Name=NO07G00390.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1253bp
MMFDDFFPFLPDSASSFTPAHSETSAKKKRKPRKSKAPSTSTSTPINSST
SAPGASAPVPPTAHGASNGSSPPISSPAAPASKKRKKEHLPNTIPRAPHP
SASPFIQLFLVVDGQHKLGLMMPRLATVKQLSETALGCYQAWREDHLVMP
AAVAAACAGAIPPPSPRHRGNGNTSSSNNKGWKKRLCVTSIGTWNAFTSM
PASSSSSPSPSFAALFSSLRQITPRTLQLGKPHCWRLLSNPKALVGDELA
DTGVVMMRTDGRPLHANPPSSPAAAASPSLPLSLPAMAAPAVSMNGQNEK
NGDREGGGKEAATKSKKAAAAAAAAAAAATPTTTTTTPVAVAAEKSSPTK
PPLPPSVVVTTTPGGRSSDHLIDPPEKAGLGMPAWLRYLHGATTLEPRKA
NRFMRHIDAALKALKEGGREEGRIALGLETVRRKCGTSRVGHAKEALVAL
LESVKEEEWREEGLVAGDKKQQNKKGKVAIAAVEEHEDGCSDSSSGSGSS
SSDSSSSNSSSSSSDSSSNGGGSSSSSSSSGSGSDSEASSESELEAEKKA
GKNKATGITEVGGKGTAVPANKTPGRVATVAAAAAAATAATQNNGKKAEK
MQQQPQQPQQPQQQQEGKKVVAEPSAQPANTKDQKGDTSSSSSPSSSSSS
SSSSSSSSSSDSDSFLGGEDSSSDEEEMPTSKPAVEEAAQKREVAPLTPT
TKGVGGGAQNGVVAAGGEKVAAATALSPARSVALKAAAAEKKVEEQEEKK
KEEEGEEEYSGSESESEREEGSSSSSSSSSSFSSSSSSSSSSWSDYDDDD
NNGEKKEEREGLGKEKAVAASVRPKFLVSTPADAATADPAAVVHRLHPSY
TGLKKNEGRVQEKMSANSDESSEGEEEEEGEKTHFDGKEDTKEAVERQAP
RSSSSSSSSSSSSSSDEEGEGEEGKKRRAPVAVVTAHRQKKNEGMMTGTT
RPASLDSSASSPSSSSSSSFEDEGEEEEGENAVKSSSSTGSKVAATNQRG
ANASGTGKYQQQQQQQQRRTSSVAPQDQDVLFSLLNGFTAPSAIPPSRRT
SLPTSLPPATTATTSSTGSSSEDSKKKKRKTLPANSTGIIAPSLPPPSSS
SSSFSSSSSSSSSTPTVTKAVTAAGPAAPAVPAASTLNTTAKKAIAAGTI
ATTTTISAASAAAAAAPPPPTRRTTRAAATAAAIEKKRGGGKNGEKEDGE
ERETRALSTRVVKKRGAPAAAATTASAAGMTRERASLRTATPERAGKRTK
RR*
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Synonyms
Publications