NO07G00380, NO07G00380 (gene) Nannochloropsis oceanica

Overview
NameNO07G00380
Unique NameNO07G00380
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3858
Alignment locationchr7:142710..146567 +

Link to JBrowse

Properties
Property NameValue
DescriptionBzip transcription
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:142710..146567 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
GO annotation for IMET1v2 genes2019-07-10
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003700DNA-binding transcription factor activity
GO:0003700DNA-binding transcription factor activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0006355regulation of transcription, DNA-templated
Vocabulary: INTERPRO
TermDefinition
IPR004826bZIP_Maf
IPR004827bZIP
Homology
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BLAST of NO07G00380 vs. NCBI_GenBank
Match: EWM27349.1 (bzip transcription [Nannochloropsis gaditana])

HSP 1 Score: 84.0 bits (206), Expect = 2.800e-12
Identity = 166/461 (36.01%), Postives = 201/461 (43.60%), Query Frame = 0 
Query:   11 EEDMMEEELDLSGLDDDLLFGLLDGEGDGDSLPSFMMGAGGADPAGACGQGAPSI-----SPFTAVSAAVAATL----------TDGHNPSSMVEMDI-MSPHACSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKP----------------PVTAPLAPKNMT-NKRPLPISSTSSVCSFSSGGSIISRSSSGSGKSCRQSQQPVLAPRPPILKA--GAGAE--------ILHPQSIKRQAVGR-ALASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALESRGLPPTELKKQRRLIKNRMASQLHREKQKQQVGNLQAALAAKEEEVKRLKGXXXXXXXXXXXXXXXMWALRRGLLEQGVGG----------REGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGNSPASLCHDG--EGEGGGMEGGYAS 416
            +ED M+E+LDLSGLD+DL  GL+   G+G+ + +FM+     D     G   PS+     SPFTAVSAAVA +           +  H  SS    D+ + P +  +                                            +P                P  APL PK     KRPLP S + +     SGGSI    S G      +S +   + RPP L    G GA+         L    + R  + R AL                                   AALE +GL P ELKKQRRLIKNRMASQ HRE+QKQQ+ +LQA+LAAKEEE+  L+                + +LR  L   GV G             XXXXXXXXX   XXXXXXXXXXXXXXXXXXXXXX L NSP SL H G  E   GG EGGY S
Sbjct:    6 KEDFMDEDLDLSGLDEDLFIGLM---GEGEGVNTFML-----DDVREDGLTCPSVVDDSPSPFTAVSAAVATSFKAECMDDDQSSHVHGESSAEAFDLGVLPESIHAQQQDGIIPEQENQSGLKRNAHPRKLSDTGSLSSPHAQQSPHFRGQPLPRRWPEQDEACRQGRPALAPLLPKGAACTKRPLPRSDSHT----RSGGSIGKGESDGRRVVKSESFR---SGRPPPLSCFMGPGADWEGGERSGKLQDAKMDRHTLKRPALEDIRSTPSSCSSSTSTGSSHSRSGGNEDAELTSALAALERQGLAPQELKKQRRLIKNRMASQQHRERQKQQLEHLQASLAAKEEEIMALRVERDVLRTANGEMKKELGSLRHAL---GVPGPXXXXXXXXXXXXXXXXXXXXXSPSXXXXXXXXXXXXXXXXXXXXXXSLTNSPVSLLHQGTEEAREGGGEGGYLS 448
The following BLAST results are available for this feature:
BLAST of NO07G00380 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27349.12.800e-1236.01bzip transcription [Nannochloropsis gaditana][more]
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000863NSK000863Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00380.1NO07G00380.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|668977gene_2346Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100394g5gene3209Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00380.1NO07G00380.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00380 ID=NO07G00380|Name=NO07G00380|organism=Nannochloropsis oceanica|type=gene|length=3858bp
CCCCATTAAATTGAAGAGAAGACGGGCTGGTCGATAGTCAGTTTATACAT
TCCCGTTTCAACTTGTCGTATGGTCGCAATCACAAGGGAAAGAGAATGGT
GCGCGCCATGCACCCACCACCCATCGCTCACAAGGTGGCTTCTCCAGCCG
CGCGTTTGTCATCACGACCTTGGTGATGCTCGTCCTTGCCCACACCCACA
CAAGCTCTCTCTTCCACCGCGCCCCAACCATACCCACTCGTCGCCGCTCA
TACATCATATTTACACATATGGAGGTAGCACATAGACAGGAGGGCTTATC
AGTGCCTGCTCTTCATCCGTGGATTGGTCGCTCCCGTGTCGGGCCCACAC
ACCACTCGACCCCGTTCAGGGATCGAAGAAGCTCCGACCATGGACACATT
TTCATACACGAATAGAAAGGAGGAAGATATGATGGAGGAGGAGCTGGACC
TGAGTGGCCTGGACGATGACTTACTCTTTGGGTTGCTCGATGGAGAGGGG
GATGGTGATAGCCTGCCATCTTTCATGATGGGCGCCGGCGGAGCAGACCC
TGCTGGTGCTTGTGGACAAGGTGCCCCTTCCATTTCGCCCTTCACTGCCG
TCTCAGCCGCAGTGGCAGCGACACTGACGGACGGTCATAACCCTTCCAGC
ATGGTGGAGATGGACATTATGTCGCCCCACGCGTGCAGCAGCAGCACTCA
CCTCCACCCACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGAAGCAGCAGCAG
CAGCAGCAGTGGCAGCCGGAGACCAAGCCACCTGTAACTGCCCCCCTCGC
GCCCAAAAACATGACAAACAAGCGACCGTTGCCCATCAGCAGCACTAGTA
GCGTGTGCAGCTTCAGCAGTGGTGGTAGCATCATCAGCAGGAGCAGCAGC
GGCAGCGGCAAGAGTTGCAGGCAATCACAGCAGCCGGTCCTCGCCCCGAG
ACCGCCGATACTCAAAGCTGGAGCAGGAGCAGAAATCCTTCACCCGCAAT
CTATCAAGCGCCAAGCCGTCGGCAGGGCCTTGGCCTCCACCCCTTCCTCC
TCCTCCTCCTCCTCCTCCTCCTCCTCCTCCCTCCCCTCCTCTACCACCAC
CCACCCCAACGACGATGCCGAGCTTCTCGCAGCGCTCGCTGCCCTCGAGT
CCAGGGGCCTTCCCCCCACCGAATTGAAAAAACAACGACGGCTTATTAAG
AATCGCATGGCGTCCCAGCTGCACCGCGAAAAACAAAAGCAGCAGGTAGG
GAACTTGCAGGCAGCCTTGGCAGCGAAGGAGGAGGAGGTGAAACGATTGA
AAGGGGAGGTTGAGAGGCTGGAGGAGGAGAATGCGTCGATGAAGGAAGAA
ATGTGGGCGTTGCGGCGCGGTCTGTTGGAGCAGGGGGTGGGAGGGAGGGA
AGGAGGATGGGAAGGAGGGAATAGCAGTAGTTCGAGTGGCGGGTACACGT
CCCCGTCGGTGTCATCCGTGAGTGGTGTGAGTAGCACCTCGTCTTCCCCC
CCGCCCTCGCTTGGGAACAGTCCGGCGTCGCTTTGCCATGATGGGGAGGG
GGAAGGGGGAGGGATGGAGGGAGGGTATGCCTCCGACGCGAGTGTTCCTT
CCCCCGGCCCCTCCACCTCGACCTCGACCTCCTCCTCGTCGGCCGCCACT
ACACAGAGGGCAGCACTAGAAGGGGGAACGTCACGGATTTTTTCGTTTTC
GGCTGCTTCTTCTCCTACTCCGACTCCTTCTTCGCCTCGTCCTTCCCCTC
CGGCAGCAGCCAGGGAAGGACGAGGAGGAGGAAGGGCAGAAGGAGGAGGA
AGGGCAGAAGGAGGAGGAAGATCGGGGGTGGGGGGATTGCCTTTGTTTGG
CGCCCTTTTCCTCTTCACGTTCCTCGCTGCTCCTTCCACTCTCTTGCTGG
GGGGACTTCGACGGACGACCACCAGTACTTTTGGGGGTTATTTGAGTGCG
TCCTTCCCCCCTTCCTCCGCCTCGTCCTCGTCCTCGTCCTTGGTGGTGGG
GAGGGCCGGCCCAGTCGTGGCTGTAAACGCAGTGCGGGACTTGACCATGC
CGTGGTTGTCGCCGAAGGAGGGCAGGAAGGAGGAAGGGATGGAAGGGGGG
AGGAAGGAGGACGGGTACTTGATAGATCCTGTCGAGAGGCTGCCGCACAA
GTGGCTTGCGCTGGAAGGAGGGAGGGAGGACGGGAGGGCGGGAGGGAGGG
AAGGCCCGCCGGGGGCGCCGTGGACTTATGGAGGTAGTGTAGAGTTGTTT
CTGGGAAGCGGCAGCAGGAGCAGTAGCGGGAACAGTGGAGAAAGTGCAAG
GGATGTGGTGGGCAACGTGAGCACCATCCCTGCCTCCCTCCCTCCTTCTC
CACCTCTCTCCACCCCTCCTCACCGCCTTCGAAAGCAGCCACGGGCCAAG
GCCAAGCTGAAAATGCAGGGAGAGAAGGAGGGAGGGAAAGAGGGAGGGGT
AGGGAGTTATCCTTTGACGGAGGACGAGGCGAAACAAGTTGATTTCTACG
TCGGGCGGGATGGGAAGGGTCAGCACGATAAGCAGGTGCTGGTTTCACGG
GAGGGAAGAAGGGAGGAAGCGGAGAAGGGGGAGGGCAGGCGGGGGCAAGG
GAGGGCGACGTCGTATTTGTTCTGTCCACAGGCTTATGGAGTGATGGCTA
AGGAAGTATCGGAGGGCTATTGGGCGGGGATGGAGCAGATGAGAGTGCTG
CGGGAGGGGAGGAGGGCGGGGGGAAGGGAGGGGGAGAGGACGAATATGGC
GACGACGGTGTTGTCGAGAAATGCGACGCTGGCTGCGAAGGCGGGTCAGA
GGGGAGAGCGAGCGCAGCAGGAGGGGAAGGAGGTAGGGGAGGAGAAGGAA
GAAGATGAGCGAGAGGGACCTGTCATCTCGGCTGGCCCCTGTTCTCGGGG
AGGGGGAGGCCATGCCGGAGGGCGGGAAGGAGGAGGAGGAGGAGGAGGAG
CGGCCGAAGGAGGCGGACAGGAATTAGATTCCGCCCCGCACATGCTATTT
CTTCTTCCGGCAAATTCCTTGGACTGGGGCTCGCAGGCGGCGGCACAGGG
GCAGGTGCCGGTGGAGGGGTGGTTGGAGGTGGGCTGTCGCCTGACGTCGA
TCAGGATGGTGGAAGACGTCCGATTTGGCGGGACCGCTTCGGCCTAGGTG
AGGAGTAGGAAATGAGGGGGCACAATAGGAGAATGTGGGATAAGAACGAC
AAATGGAGTCAAGAGTTTTAGGATTTGAGTCGTATGAGGAGGGAGGAAGT
GAGGGGCGGACGGAGGAAGAGAGACTACTTGATATGGGGAATTTTTAATG
TGCAGGTCAAACAATTAGAGTCAAAGCACGAAAGAGACGAAGCGATGATG
AAATGGGAATCAAAAATCGAACAAGAGGAGGAGACGAAGTCAAGCTGGAA
ATGGGAGTGTGAGTGAAAAAGTGAAAGAGAGCGAAGATGTGAAGACAGTG
TCAGAAAAAAGGAGGAGAGGGATGGAGAGAAGGAAGAGGGGGAGTGGACA
CAGTGCGGTGTGCGCCTCTCGCAGTGTAGGCAAGCAAGGTACCACGAGGT
CAGGGAAACGGCGAAAGGAGAGTCTCCCCTTGTTTTAATGAGAGCTGAGC
TGTGCTTAGTACACAAGTGTGTGTGTGGTATCTGCGAGGAGGGTGTTAAA
TGGACAATGAGTACGAAGAAGAGATGCGGCACACCACTGAAAAAATAAAA
AGAATACGAAGAATGAGAGAGAGAGAAATTGCGAATAAACACAGCAGCTG
CAAAAGTAAATAACCAAAGTTGTCGAAACGATTCAAATACAGACGGACGA
AAAAAAAG
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protein sequence of NO07G00380.1

>NO07G00380.1-protein ID=NO07G00380.1-protein|Name=NO07G00380.1|organism=Nannochloropsis oceanica|type=polypeptide|length=936bp
MDTFSYTNRKEEDMMEEELDLSGLDDDLLFGLLDGEGDGDSLPSFMMGAG
GADPAGACGQGAPSISPFTAVSAAVAATLTDGHNPSSMVEMDIMSPHACS
SSTHLHPQQQQQQQQQQQQQQQQQQQQQQQQQQKQQQQQQWQPETKPPVT
APLAPKNMTNKRPLPISSTSSVCSFSSGGSIISRSSSGSGKSCRQSQQPV
LAPRPPILKAGAGAEILHPQSIKRQAVGRALASTPSSSSSSSSSSSSLPS
STTTHPNDDAELLAALAALESRGLPPTELKKQRRLIKNRMASQLHREKQK
QQVGNLQAALAAKEEEVKRLKGEVERLEEENASMKEEMWALRRGLLEQGV
GGREGGWEGGNSSSSSGGYTSPSVSSVSGVSSTSSSPPPSLGNSPASLCH
DGEGEGGGMEGGYASDASVPSPGPSTSTSTSSSSAATTQRAALEGGTSRI
FSFSAASSPTPTPSSPRPSPPAAAREGRGGGRAEGGGRAEGGGRSGVGGL
PLFGALFLFTFLAAPSTLLLGGLRRTTTSTFGGYLSASFPPSSASSSSSS
LVVGRAGPVVAVNAVRDLTMPWLSPKEGRKEEGMEGGRKEDGYLIDPVER
LPHKWLALEGGREDGRAGGREGPPGAPWTYGGSVELFLGSGSRSSSGNSG
ESARDVVGNVSTIPASLPPSPPLSTPPHRLRKQPRAKAKLKMQGEKEGGK
EGGVGSYPLTEDEAKQVDFYVGRDGKGQHDKQVLVSREGRREEAEKGEGR
RGQGRATSYLFCPQAYGVMAKEVSEGYWAGMEQMRVLREGRRAGGREGER
TNMATTVLSRNATLAAKAGQRGERAQQEGKEVGEEKEEDEREGPVISAGP
CSRGGGGHAGGREGGGGGGGAAEGGGQELDSAPHMLFLLPANSLDWGSQA
AAQGQVPVEGWLEVGCRLTSIRMVEDVRFGGTASA*
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Synonyms
Publications