NO07G00350, NO07G00350 (gene) Nannochloropsis oceanica

Overview
NameNO07G00350
Unique NameNO07G00350
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1807
Alignment locationchr7:137350..139156 +

Link to JBrowse

Properties
Property NameValue
DescriptionLate embryogenesis abundant protein (LEA) family protein
Mutants
Expression

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:137350..139156 +
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
PRJNA7699582024-08-13
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
PXD0160542021-01-14
PXD0166992021-01-08
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
PXD0100302020-03-16
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PXD0087212019-04-30
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO07G00350 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


This gene is orthologous to the following gene feature(s):

Feature NameUnique NameSpeciesType
NSK000866NSK000866Nannochloropsis salina (N. salina CCMP1776)gene


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00350.1NO07G00350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|326394gene_2342Nannochloropsis oceanica (N. oceanica CCMP1779)gene
Naga_100394g3gene3207Nannochloropsis gaditana (N. gaditana B-31)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00350.1NO07G00350.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00350 ID=NO07G00350|Name=NO07G00350|organism=Nannochloropsis oceanica|type=gene|length=1807bp
CTGCAGAACAGAACTTCGTCCCGGACGCAGATAAAAATCAAGGCTGATTA
AAGCACCACGCCAATATGGACAAAACATTTGCCGCTACGCAACACCTGCA
GCAGCCACAGGCCTCGCAGAAGTCCCAAGGCCGTAAGGAGGGAGGCTTGG
GTGATAGCCTGATGGCGGAAGAAGAGTTTGTCGTGCCCCCCGAAGGTCGT
CCGGCCACGACTCCGGCAGGGGAAAAAGGACGAGAAGGAGGGACGGATCC
CTTGCGTGCGACGGATGAGGCCTTGACGGGTGCGGCAGGGTGGGTCAAGG
GAAAGGCGGCTGGGGCGTGGCAGACGGTAAAAGCCGGTACTGTCTCGGGA
GGGCACAAGACGGCGGAGGGCTTGGGCACTGTCAAGGACAAGATGGGCGA
AGCTTTGGGTGTGGCCCGTGAGAAGGTAGCCAGCGCGACACATAGGGTGG
CGAAGACCCAGGAACCCAAGTCGCCTGTCCGAGAGCGGGCCGCGCAAGAA
TTTCACAAGAAGAAAGAGGAGGGCAAAGAGACCACCCAGGCGATGAAGGC
ACAGGTAGTGGACAAGGCCGAGGGTGCCACCGATGTGACCAAGGTTAAGA
TTGGAGAAGTGGCGGCGCGGGGCAGCGAAGCTGGCGCGCAAGCGCAGGAG
AGGGTGAATAAAATGGGACATCGTGTGGCAGAGCACGCTGAGGCGATGGA
AAATAAAGTCCAGTCAATGGCTCAAGCGACCAAGCAACAGGGCCAGTCTG
CCGTGGATCGAGCCAAGGAAACCGCCCAAGAGGCAGCCGGCACCACGGCA
GAGCACATGGGGGATGCGGCGGGAAAGGTCAGCGGCTTTATGGAGGGCAT
GGCTGGCGAAGTGCAGCACCGGTCGAAGGAAGAGTAAAGACGACAAGGCG
GACCCGTACCGATAGGGTTCAGTGAACTTGAAGGAGCGAGTGGCATCAAG
ATACGTGGACGGACGAAGAAAGGAGGAGGAGAACGAGTCAAGGCGTTGGC
ACGTGACTTGGCTACCTTTACCTTGGACATGTCGCGAGCGTGTGTGGTAT
GAGGGGAGGAGGATAGAGGGATATTATCTATTATTGTAAAAACAGTAAAT
TGGATGAAGGAGATAATGAAGGATACGTATGCACGCATTAGAAAGGGGGA
AGAGAGAGTGTCAAGGCGTCGGCGCGTGACTTGGCTACCTTGGACATGCC
GTGAGCGTGTGGGGTAGGAGAGGAAATGGATAGGAGGATTTTATCTCTTG
TTATGAGAGCAGTTAATTGGATGAAGGATATTATGACGGAAACATATGCC
CGCATGAGGAGATAGACTAGATTGTGAAGGAATGAATGCCTGTCCTCTTG
CTGCAGGGTAGGCAAAATCAGAGGGCAAGAAATGTTCGCTTAGACGTGGC
TGGATTTTTACGGAGCCCATTCATGCAAAAAATTCTATGTTCAAGCCGAC
AGGTTATTTACACGCCCTCTGTGGTAGCTCATCGGGCCGCTGTCCAACGG
TAATCGGCGCGCAAGAAAAAGCAGCGGGTGTAAGTGATTTTTTTTTTTTT
TTAAAAAACATGAAGGGACCATGTAGACAGAAATTCAGAGAGATATCAAA
TCAGAGCAGTGTCGGTAGAGTATATGGAAAAATAAAAGACGCCGCGATCG
AGTTCTGGTTGGTGCGTGTGCCGTGTGGGTAAACGATTACGTTCCTATCC
CTCGAGAAATGTCAGAAACCGGCTCTATAAAATTGCGGAGCATGAACCAA
AAAAAAATATGAGTGGGTATCATTTCCTTGACCAAGTGGAAAGCGAACCA
ATTGTTG
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protein sequence of NO07G00350.1

>NO07G00350.1-protein ID=NO07G00350.1-protein|Name=NO07G00350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=274bp
MDKTFAATQHLQQPQASQKSQGRKEGGLGDSLMAEEEFVVPPEGRPATTP
AGEKGREGGTDPLRATDEALTGAAGWVKGKAAGAWQTVKAGTVSGGHKTA
EGLGTVKDKMGEALGVAREKVASATHRVAKTQEPKSPVRERAAQEFHKKK
EEGKETTQAMKAQVVDKAEGATDVTKVKIGEVAARGSEAGAQAQERVNKM
GHRVAEHAEAMENKVQSMAQATKQQGQSAVDRAKETAQEAAGTTAEHMGD
AAGKVSGFMEGMAGEVQHRSKEE*
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Synonyms
Publications