NO07G00300, NO07G00300 (gene) Nannochloropsis oceanica

Overview
NameNO07G00300
Unique NameNO07G00300
Typegene
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length6329
Alignment locationchr7:116385..122713 -

Link to JBrowse

Properties
Property NameValue
DescriptionUnknown protein
Mutants
Expression

Hover the mouse over a column in the graph to view expression values.
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr7genomechr7:116385..122713 -
Analyses
This gene is derived from or has results from the following analyses
Analysis NameDate Performed
GSE1786722023-12-15
PRJNA9336932023-10-26
PRJNA9434492023-07-19
GSE1499042020-10-10
NoIMET1_WT_HS2020-09-29
GSE1396152020-03-11
PRJNA2413822020-03-11
BLASTP analysis of N. oceanica IMET1 genes2019-07-11
InterPro analysis for N. oceanica IMET1 genes2019-07-11
PRJNA1821802019-04-25
Gene prediction for N. oceanica IMET12017-10-24
Annotated Terms
Homology
BLAST of NO07G00300 vs. NCBI_GenBank
Match: OEU12353.1 (hypothetical protein FRACYDRAFT_244618 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 283.5 bits (724), Expect = 2.000e-72
Identity = 164/399 (41.10%), Postives = 240/399 (60.15%), Query Frame = 0
Query:  409 GLVVSYREKNETLSSLT---KQKVRRMMHYQVPLKPFEATIRCANKTAQ-LEDDDGTYTAGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAE-------ESAVASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRW--YGSSTKQYRFGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNG------MPVLLDATDGHPGGD--------------VTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPVYALDGSVILKPDQ 775
            G V+ Y E  +    LT   K++V+RMMHY V L+PF AT++      Q    +DG+ + G  + TS+           SS L    MCTPQSFPPTP SRA V+ R S+F+DD+V+LARDQLR+ + +++ ++ T+  A +L +   LAVF+++D + GI LSCG H ATKVG   LY S+R+MVPI+RN  V+F+M+++         ++++A+L  GLST EMP NTLVG+WK S+G C+TGQIL+  +W   G       FG   T+G L+ +D+  + E+WDG ++ A++ F++NG      +P L    D HP                   PL +P ++++YPTLTLHSP T V+ RF A DI+   R  +G P  V VYA+DGS++ K ++
Sbjct:  342 GRVIKYTEIGDNDGGLTGKEKRRVQRMMHYDVSLRPFVATVKLQESFKQDSTTNDGSDSVGDYNETSS----------SSSPLDGPFMCTPQSFPPTPASRAHVLKRGSRFADDVVFLARDQLRVHDGLESSNERTREMAHALTEGKRLAVFDADDASAGIDLSCGQHVATKVGNL-LYCSSRSMVPILRNCFVYFEMTVLGRSGGGFIPQTSMATLSFGLSTKEMPPNTLVGAWKGSVGLCTTGQILIAGQWCSVGQDPTITPFGDRETVGCLVCLDDSSAFETWDGVMITATITFNINGRIVSPHVPCLPTGLDQHPQTSKLPDVPVGATPPSFTLPLLVPAEEELYPTLTLHSPGTSVMCRFSAEDIIARSREDIGVPPNVAVYAVDGSLVFKGEE 729          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: CBN77895.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 273.5 bits (698), Expect = 2.100e-69
Identity = 221/639 (34.59%), Postives = 297/639 (46.48%), Query Frame = 0
Query:  245 LLRLLEWGLGTAGRLAHGSVMLVVTCVRGVGNGIHAVYAHIMATLSYFLRLGLALWRELRSLSLRELVRALLLLLTDKLERDV---TGRESSSMGSRSSSHHGLGLGGSSKGPLLGSAVLKMPSFFNSFKELDEPAQGEDEAGEP--FAFLSG-------AIPQLNAGLGRPS--SKMGLVVSYREKNETLSSLTK-QKVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYTAGGGSSTSTLDRAPSSSFRRS----SSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKAD-DDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAEESAVASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTK--QYRFGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNGMPVLLDATD------------------------------------------------------------------------------GHPGGDVTP-----------LFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPVYALDGSVILKP 773
            LL LL W  G A  +  G    V      V  G     A+++ +L   L +   +W ELR LSL EL   +  ++T     D       +S   G  S       LG S +     S              L +  +G   AG P    + SG       A  Q +A   R    ++   +VSY E+ E+     K Q+VRR MHY + L+ F+AT+            DG ++AG GS     D       R S    SS F   MCTPQSFPPTP+SRA VMAR SQFSDD+++LARD LRL E +K   D+ T+  A  L++Q  LAV +  D   GIVL+CG H ATKVG + LY+S RAMVP++RNRHV+FQ+S + E     S+ +GLSTPEMPL+TLVG++  S+GFCSTGQIL+ SRWYG   +    + G   T+GVL+++D  R   SWDG++++ +                                                                                              G  GG + P           L +PKD D++PT+T+HSP+T++L RFCA D+L   R  +GAP G PVYALDGS+I  P
Sbjct:  285 LLALLRWAAGGASAVL-GVSFRVALLPYDVTKG---AVAYVVGSLEAMLNIATEIWSELRHLSLAELAVVISCVVTGNPLPDFLLDPDYDSVDSGGSSYGXXXXRLGNSRRIFSRSSRGSPXXXXXXXXXXLSDYLRGPSSAGYPDDEFYRSGGAGGTRVAWQQAHAMRRRLDRVNRTASLVSYEERAESAVPRAKAQRVRRRMHYAMSLQCFQATV----------TKDGQHSAGAGSDAIGEDGDDDDDGRVSVEGGSSAF---MCTPQSFPPTPVSRAHVMARTSQFSDDVLFLARDHLRLGENLKPGVDETTRATADFLRRQQRLAVLDGHDACEGIVLTCGHHRATKVGPS-LYSSARAMVPVLRNRHVYFQVSCVREGPLAPSIGVGLSTPEMPLSTLVGAFSNSVGFCSTGQILMSSRWYGEPGEFAMRKAGMMTTVGVLVYLDGSRPFRSWDGDMLQQASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALGIGRGGGTMLPPDVPETSAALGLALPKDRDLFPTVTIHSPNTEILCRFCAEDLLGVTRENMGAPPGAPVYALDGSLINLP 905          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: XP_002290676.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED92428.1 predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 250.0 bits (637), Expect = 2.400e-62
Identity = 159/411 (38.69%), Postives = 238/411 (57.91%), Query Frame = 0
Query:  411 VVSYREK--NETLSSLTKQKVRRMMHYQVPLKPFEATIRCAN--KTAQLEDDDGTYTAG--GGSSTSTLDR---------APSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFN-SEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAEESA-----------VASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGS-STKQYRFGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNGMPV------------------LLDATDGHPGGDV-----TPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPVYALDGSVIL 771
            +V+Y E+   E      K++ +RMMHY V  +PF ATI+ ++  K+ +++ +     +    GSS S   R         +  S    + S+F   M TP SFPPTP SR     R S+F++++++LARDQLR+E  +   ++ T+  +++LK  + LAVF+ + D   GI LSCG H ATKVG   LY STR+M+P+MRN  V+F++S+    S            VA+L IGLST EMPLNTLVG+WK S+G C+TGQIL+  +W+    T+   +G   T+G L+++D+  S ++W+G +V A + F+VNG+ V                     ++  H   DV       L +PK  +++PT+TLHSP+T V+ RF A D+L   R+ +GAP GV VY++DGSVIL
Sbjct: 1685 LVAYSERAGEEAFGRAQKKRAQRMMHYNVSFRPFTATIQPSSPKKSGKMKHNVSFELSNLPMGSSVSDFGRGYDVDNDSLSSESIHSNTGSIF---MRTPTSFPPTPTSRLYYFERGSRFTENVIFLARDQLRVERGLDNSNEQTRAMSKALKDGSRLAVFDAAADGGGGIALSCGQHIATKVG-NALYCSTRSMIPVMRNSFVYFEISVSPPPSMCDASHYHPQMDVATLSIGLSTLEMPLNTLVGAWKGSVGLCTTGQILLAGQWFAPFDTQGSSYGSNSTVGCLVYLDDNASRDTWEGAVVTADVTFNVNGIVVPSVECSKPMGGSLAKNNSFPSSSTMHQSDDVDDAPTLSLVVPKVQELFPTVTLHSPATCVMCRFNAEDLLAYSRAEIGAPKGVTVYSVDGSVIL 2091          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: GAX29394.1 (hypothetical protein FisN_16Hh166 [Fistulifera solaris])

HSP 1 Score: 234.6 bits (597), Expect = 1.100e-57
Identity = 153/434 (35.25%), Postives = 225/434 (51.84%), Query Frame = 0
Query:  410 LVVSYREKNETLSSLTKQ---KVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYTAGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSED-TATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAEESAV-----ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYR-FGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNG---MPVLLDATDGHPGG--------------------------------DVTP----------------------------LFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAP-LGVPVYALDGSVI 770
            LVVSY+E  +    LT++   + RRMMHY V L+PF AT+    +             GGGS    ++ + S             MCTPQSFPPTP SR  VM + S+FS+D ++ ARD+LRL + + ++D+ T+  A +LK+   LAVF+  D   + I L CGGH ATKVG+   Y++ R  VP++RN +V+F+MS++    ++      +L IGLST EMP NTLVG+W+ S+G C+ GQIL G +W  S       +  G T+G L+ +D+  + E+WDG ++ A++ FSV+G    PV+    D  P                                   VTP                            L +P  +D++PT+T+ S +T V+ RF + DIL   R+++GAP  G  VYA+DGSV+
Sbjct:  342 LVVSYKEYEDDTGGLTRKAISRTRRMMHYAVSLRPFVATVAVNQE-------------GGGSPMLAMNESESDESDSVGDGDSPFMCTPQSFPPTPHSRQFVMMQKSRFSEDDIFAARDRLRLHDALASEDEKTREMAAALKENRILAVFDDRDCRESDIELRCGGHVATKVGSM-YYSTARGRVPLLRNCYVYFEMSVLPNIRSIPPITLPTLSIGLSTEEMPPNTLVGAWQGSVGLCTNGQILTGGQWCSSPDPALNCYTAGSTVGCLVRLDDDSAFETWDGVMITATVTFSVDGRRVSPVIFPPADLQPKAPPTLSAAVTSTSLDIKPSSLDSKLRTMGTSQVSVTPDLLARPPMSFGPPETLASNPPFPTASVKLLVPAAEDVFPTVTMQSVATSVMCRFSSQDILATSRNMIGAPDDGSLVYAVDGSVL 761          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: GAX26327.1 (hypothetical protein FisN_16Lh166 [Fistulifera solaris])

HSP 1 Score: 233.0 bits (593), Expect = 3.100e-57
Identity = 156/436 (35.78%), Postives = 229/436 (52.52%), Query Frame = 0
Query:  411 VVSYREKNETLSSLTKQ---KVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYTAGGGS---STSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSED-TATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAEESAV-----ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYR-FGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNG---MPVLLDATDGHPGG--------------------------------DVTP----------------------------LFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAP-LGVPVYALDGSVI 770
            VVSY+E  +    LT++   + RRMMHY V L+PF AT+    +             GGGS   +T+  D   S S     S F   MCTPQSFPPTP SR  V+ + S+FS+D ++ ARD+LRL + + ++D+ T+  A +LK+   LAVF+  D   + I L CGGH ATKVG+   Y++ R  VP++RN +V+F+MS++    ++      +L IGLST EMP NTLVG+W+ S+G C+ GQIL G +W  S       +  G T+G L+ +D+  + E+WDG ++ A++ FSV+G    PV+   +D  P                                   VTP                            L +P  +D++PT+T+ S +T V+ RF + DIL   R+++GAP  G  VYA+DGSV+
Sbjct:  345 VVSYKEYEDDTGGLTRKAISRTRRMMHYAVSLRPFVATVAVNQE-------------GGGSPMLATNESDSDESDSAGDGDSPF---MCTPQSFPPTPHSRQFVLMQKSRFSEDDIFAARDRLRLHDALASEDEKTREMAAALKENRILAVFDDRDGRESDIELRCGGHVATKVGSM-YYSTARGRVPLLRNCYVYFEMSVLPNIRSIPPITLPTLSIGLSTEEMPPNTLVGAWQGSVGLCTNGQILTGGQWCASPDPALNCYTAGSTVGCLVRLDDDSAFETWDGVMITATVTFSVDGRRVSPVIFPPSDLQPKAPPTLSAAVTSTSLDIKPSSLDSKLRTMGASQISVTPDLLARPPMSFGPPEILGSNPPFPTASVKLLVPAAEDVFPTVTMQSVATSVMCRFSSQDILATSRNMIGAPDDGSLVYAVDGSVL 763          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: OWZ15322.1 (hypothetical protein PHMEG_00011057 [Phytophthora megakarya])

HSP 1 Score: 191.8 bits (486), Expect = 7.900e-45
Identity = 143/419 (34.13%), Postives = 208/419 (49.64%), Query Frame = 0
Query:  406 SKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCAN---KTAQLEDDDGTYTAGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIM--------AEESAV--------------------------ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYRFGCGCTIGVLIHIDECRSSESWD-------------------GELVEASLKFSVNGMPVLLDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPV--YALDG 767
            S   +V+ Y+EK   + S   +++RR+MH+Q+PL  FEAT+R      + A       + T+ GG+S +      +SS+   SS       TP+S P +P++R  V   FS FSDD++Y ARD+LR E          + A  + ++   +  FN+ D    I LSCG HCA+KVG TG+Y S RA VP+ +NR V+F+M++         A +SA                           AS+CIGLST  MPLNTLVG+ K SIGF S G +LVGS    S     ++G   T+GVL H+ +   +E+ D                     +VEAS++F+V+G+ +     D +       L  P   ++YPTLTLHS    V  +  A DI  P+   +  P+  PV  + LDG
Sbjct:  196 SLTAVVLEYKEKECMVPSNIDRRIRRVMHFQIPLHSFEATVRLPPDNVQNASAWSRSTSDTSVGGTSHNRAQEETTSSYAHLSS------ATPRSIPVSPMARKRVQLAFSNFSDDVLYQARDRLRQE----------RAATLTGERDLRVPRFNAHDCHEDIYLSCGRHCASKVG-TGMYRSVRASVPLQKNRFVYFEMTLQQGRTPARGANQSASRLETSSQVARGPSAVGPNPSDRVGIDASVCIGLSTRLMPLNTLVGASKNSIGFYSAGHVLVGSERRRSIGVGRKYGFQSTVGVLAHVVDHEDNEAVDVSSGSAPQPSSSSESSNSGPSIVEASVRFTVDGIAL----RDNNDRVMEFTLPFPSRSELYPTLTLHSQDVHVFSQMSAPDISGPNLQELELPVEAPVEIWCLDG 593          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: XP_008895411.1 (hypothetical protein PPTG_04850 [Phytophthora parasitica INRA-310] >ETI38435.1 hypothetical protein F443_15833 [Phytophthora parasitica P1569] >ETK78637.1 hypothetical protein L915_15389 [Phytophthora parasitica] >ETL32068.1 hypothetical protein L916_15283 [Phytophthora parasitica] >ETM38468.1 hypothetical protein L914_15242 [Phytophthora parasitica] >ETN19579.1 hypothetical protein PPTG_04850 [Phytophthora parasitica INRA-310] >ETO67208.1 hypothetical protein F444_15813 [Phytophthora parasitica P1976] >ETP08319.1 hypothetical protein F441_15666 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 183.0 bits (463), Expect = 3.700e-42
Identity = 145/429 (33.80%), Postives = 205/429 (47.79%), Query Frame = 0
Query:  406 SKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYTAG--GGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIM--------AEESAV----------------------------------ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYRFGCGCTIGVLIHI-----DEC-------------RSSESWDGE----LVEASLKFSVNGMPVLLDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPV--YALDG 767
            S   +V+ YREK   + S   +++RR+MH+Q+PL  FEAT+R    T Q      + + G  G  S S      +SS+   SS       TP+S P +P++R  V   FS FSDD++Y ARDQLR E       D      + L+    +  FN+ D    I LSCG HCA+KVG TG+Y S RA VP+ +NR V+F+M++         A ++A                                   AS+CIGLST  MPLNTLVG+ K+SIGF S G +LVGS    S     ++G   T+GVL  +     DE               SS +  G+    + EA ++F+V+G+ +     D +       L +P   ++YPTLTLHS    V  +  A DI   +   +  P+  PV  + LDG
Sbjct:  204 SLTAVVLEYREKECMVPSNIDRRIRRVMHFQIPLHSFEATVRLPPDTVQTASSSRSTSDGSIGSGSQSRAQEETTSSYAHLSS------ATPRSIPVSPLARKRVQLAFSNFSDDVLYQARDQLRQERAATLTGD------RGLR----VPRFNAHDCHEDIYLSCGRHCASKVG-TGMYRSVRASVPLQKNRFVYFEMTLQQGRTPARGANQNASRLEASSQLARGSSFLSGGSAGTSSANPNDRAGIDASVCIGLSTRLMPLNTLVGASKHSIGFYSAGHVLVGSERRRSIGVGRKYGFQSTVGVLAQVVDHQEDETTGASTGNAPQPSDSSSXTGSGDAGSSIGEAFVRFTVDGIAL----RDSNNRVMEFTLPVPSRSELYPTLTLHSQDAHVFSQMSAPDITSLNLQELDLPVEAPVDIWCLDG 611          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: XP_008895413.1 (hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETI38436.1 hypothetical protein, variant 1 [Phytophthora parasitica P1569] >ETK78638.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETL32069.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETM38469.1 hypothetical protein, variant 1 [Phytophthora parasitica] >ETN19580.1 hypothetical protein, variant 1 [Phytophthora parasitica INRA-310] >ETO67209.1 hypothetical protein, variant 1 [Phytophthora parasitica P1976] >ETP08320.1 hypothetical protein, variant 1 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 183.0 bits (463), Expect = 3.700e-42
Identity = 145/429 (33.80%), Postives = 205/429 (47.79%), Query Frame = 0
Query:  406 SKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYTAG--GGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIM--------AEESAV----------------------------------ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYRFGCGCTIGVLIHI-----DEC-------------RSSESWDGE----LVEASLKFSVNGMPVLLDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPV--YALDG 767
            S   +V+ YREK   + S   +++RR+MH+Q+PL  FEAT+R    T Q      + + G  G  S S      +SS+   SS       TP+S P +P++R  V   FS FSDD++Y ARDQLR E       D      + L+    +  FN+ D    I LSCG HCA+KVG TG+Y S RA VP+ +NR V+F+M++         A ++A                                   AS+CIGLST  MPLNTLVG+ K+SIGF S G +LVGS    S     ++G   T+GVL  +     DE               SS +  G+    + EA ++F+V+G+ +     D +       L +P   ++YPTLTLHS    V  +  A DI   +   +  P+  PV  + LDG
Sbjct:  178 SLTAVVLEYREKECMVPSNIDRRIRRVMHFQIPLHSFEATVRLPPDTVQTASSSRSTSDGSIGSGSQSRAQEETTSSYAHLSS------ATPRSIPVSPLARKRVQLAFSNFSDDVLYQARDQLRQERAATLTGD------RGLR----VPRFNAHDCHEDIYLSCGRHCASKVG-TGMYRSVRASVPLQKNRFVYFEMTLQQGRTPARGANQNASRLEASSQLARGSSFLSGGSAGTSSANPNDRAGIDASVCIGLSTRLMPLNTLVGASKHSIGFYSAGHVLVGSERRRSIGVGRKYGFQSTVGVLAQVVDHQEDETTGASTGNAPQPSDSSSXTGSGDAGSSIGEAFVRFTVDGIAL----RDSNNRVMEFTLPVPSRSELYPTLTLHSQDAHVFSQMSAPDITSLNLQELDLPVEAPVDIWCLDG 585          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: XP_002907015.1 (conserved hypothetical protein [Phytophthora infestans T30-4] >EEY66416.1 conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 181.8 bits (460), Expect = 8.200e-42
Identity = 137/418 (32.78%), Postives = 198/418 (47.37%), Query Frame = 0
Query:  406 SKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYT--AGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIMAEESAV-------------------------------------ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYRFGCGCTIGVLIHIDECRSSES----------------WDGELVEASLKFSVNGMPVLLDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPV--YALDG 767
            S   +V+ Y+EK   + S   +++RR+MH+Q+PL  FEAT+R      Q      + T  + GGS+ S      +SS+   SS       TP+S P +P++R  V   FS FSDD++Y ARD+LR E       D      Q L+    +  FN+ D    I LSCG HCA+K G TG+Y S RA VP+ +NR V+F+M++    +                                       AS+CIGLST  MPLNTLVG+ KYSIGF S G +LVG+    S     ++G   T+GVL  + + +  E+                    + EA ++F+V+G+ +     D +       L  P   ++YPTLTLHS    V  +  A DI   +   +  P+  PV  + LDG
Sbjct:  202 SLTAVVLEYKEKECMVPSNIDRRIRRVMHFQIPLHSFEATVRLPPDNVQTASSSRSTTDDSIGGSNQSRAQDETTSSYTHLSS------ATPRSIPVSPLARKRVQLAFSNFSDDVLYQARDRLRQERAATLTGD------QGLR----VPRFNAHDCHEDIYLSCGRHCASKAG-TGMYRSVRASVPLQKNRFVYFEMTLQQGRTPARGTNQSSSRVETLSQAARGSSSLLANVGNPNDRAGIDASVCIGLSTRLMPLNTLVGASKYSIGFYSAGHVLVGTERRRSIGVGRKYGFQSTVGVLAQVVDHQEDEATXXXXXXXXXXXXXXXXXXSIGEAFVRFTVDGIAL----RDSNNRVMEFTLPFPSRSELYPTLTLHSQDVHVFSQMSAPDISSLNLQELDLPVEAPVDIWCLDG 598          
BLAST of NO07G00300 vs. NCBI_GenBank
Match: ETL85316.1 (hypothetical protein L917_15105 [Phytophthora parasitica] >ETP36372.1 hypothetical protein F442_15674 [Phytophthora parasitica P10297])

HSP 1 Score: 181.4 bits (459), Expect = 1.100e-41
Identity = 144/429 (33.57%), Postives = 205/429 (47.79%), Query Frame = 0
Query:  406 SKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCANKTAQLEDDDGTYTAG--GGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPPTPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFFQMSIM--------AEESAV----------------------------------ASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRWYGSSTKQYRFGCGCTIGVLIHI-----DEC-------------RSSESWDGE----LVEASLKFSVNGMPVLLDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHRSLVGAPLGVPV--YALDG 767
            S   +V+ YREK   + S   +++RR+MH+Q+PL  FEAT+R    T Q      + + G  G  S S      +SS+   SS       TP+S P +P++R  V   FS FSDD++Y ARD+LR E       D      + L+    +  FN+ D    I LSCG HCA+KVG TG+Y S RA VP+ +NR V+F+M++         A ++A                                   AS+CIGLST  MPLNTLVG+ K+SIGF S G +LVGS    S     ++G   T+GVL  +     DE               SS +  G+    + EA ++F+V+G+ +     D +       L +P   ++YPTLTLHS    V  +  A DI   +   +  P+  PV  + LDG
Sbjct:  204 SLTAVVLEYREKECMVPSNIDRRIRRVMHFQIPLHSFEATVRLPPDTVQTASSSRSTSDGSIGSGSQSRAQEETTSSYAHLSS------ATPRSIPVSPLARKRVQLAFSNFSDDVLYQARDRLRQERAATLTGD------RGLR----VPRFNAHDCHEDIYLSCGRHCASKVG-TGMYRSVRASVPLQKNRFVYFEMTLQQGRTPARGANQNASRLEASSQLARGSSFLSGGSAGTSSANPNDRAGIDASVCIGLSTRLMPLNTLVGASKHSIGFYSAGHVLVGSERRRSIGVGRKYGFQSTVGVLAQVVDHQEDETTGASTGNAPQPSDSSSXTGSGDAGSSIGEAFVRFTVDGIAL----RDSNNRVMEFTLPVPSRSELYPTLTLHSQDAHVFSQMSAPDITSLNLQELDLPVEAPVDIWCLDG 611          
The following BLAST results are available for this feature:
BLAST of NO07G00300 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes)
Total hits: 20
Match NameE-valueIdentityDescription
OEU12353.12.000e-7241.10hypothetical protein FRACYDRAFT_244618 [Fragilario... [more]
CBN77895.12.100e-6934.59conserved unknown protein [Ectocarpus siliculosus][more]
XP_002290676.12.400e-6238.69predicted protein [Thalassiosira pseudonana CCMP13... [more]
GAX29394.11.100e-5735.25hypothetical protein FisN_16Hh166 [Fistulifera sol... [more]
GAX26327.13.100e-5735.78hypothetical protein FisN_16Lh166 [Fistulifera sol... [more]
OWZ15322.17.900e-4534.13hypothetical protein PHMEG_00011057 [Phytophthora ... [more]
XP_008895411.13.700e-4233.80hypothetical protein PPTG_04850 [Phytophthora para... [more]
XP_008895413.13.700e-4233.80hypothetical protein, variant 1 [Phytophthora para... [more]
XP_002907015.18.200e-4232.78conserved hypothetical protein [Phytophthora infes... [more]
ETL85316.11.100e-4133.57hypothetical protein L917_15105 [Phytophthora para... [more]

Pages

back to top
Relationships

This gene is member of the following syntenic_region feature(s):

Feature NameUnique NameSpeciesType
nonsL102nonsL102Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ncniR071ncniR071Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region
ngnoR130ngnoR130Nannochloropsis oceanica (N. oceanica IMET1)syntenic_region


The following polypeptide feature(s) derives from this gene:

Feature NameUnique NameSpeciesType
NO07G00300.1NO07G00300.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following gene feature(s) are orthologous to this gene:

Feature NameUnique NameSpeciesType
jgi.p|Nanoce1779_2|580008gene_2336Nannochloropsis oceanica (N. oceanica CCMP1779)gene


The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameSpeciesType
NO07G00300.1NO07G00300.1Nannochloropsis oceanica (N. oceanica IMET1)mRNA


Sequences
The following sequences are available for this feature:

gene sequence

>NO07G00300 ID=NO07G00300|Name=NO07G00300|organism=Nannochloropsis oceanica|type=gene|length=6329bp
GAAAGACCAACAACGATCCACCCACAGATATATCGGTAATTGTGCCTCGT
AACCTGTGTGTCCTTGTCCAATGCTCATGCCGGTGGATTTGAAGTGCACT
CTTTCCTGACATTGTCTCTTCGAATTGAATTTTCGCGAGCAATCGACGCC
TCGTCAGTTGTCATCGTCACGAGCCCGAGGCTTGACTGCTGTGGCCAGTT
CCTAAGAGCTTGCATTCCCCCTGCATTTCGTATTCTTTACACTGCGCCCC
CTTCATGTACGTGTCCGTCTGTTATTGCATGTCGCACAAGCGGGCCAGGG
GGGATTCATGTCCTTGAGCTTCTCTCCCGAACGCTTCTTCATGGCCAAGT
CGACGGATGCTTCGTCGAATGCATGCGTCGCGTCGTCGGGCTTCCCTTTC
TCGGAGGAGAGCGAGTTAGTTTTACTTTCGTAAGCAGTCCTCGGCCACCG
TACCCACGCACCCGCAATCTATGATATGACGAGCATTGGCAAGACGCTTT
CCATTGGCTGTAGTTCGCATATCATGTCCGTCGGTCACTTATGCCTCCTC
CCCTCCCTTCCCCCTTCGCCTCATCATCAGCAGGCTTCCTGGTAGCACCA
CCGCGCTAGGATGAAGGCCATGAAGGCCGCCCTGGGGAGCGTGGGCGGCA
AGAAGGAGAGGCAACAGCAGCAGCAACGACAACAACAACAACTACAGCAG
CTGCAACACCAGCAACAACAAGAAGCGGCAGCGGCTGCCGTCCTTGAGGC
TCCATCTCCTTCTCTGTCTCCCCCCTTGCCGCCTACCGTCCTACTGCACT
CGATGCCTCTGTCCGTGCCCATGACGATGGAAGAGGGCAAGGGCGAAGGG
GTGGGGGAGGAGCAGCAGCAGCAGCACCAGGGTGGCATACAGGTAGATGT
TGTGGAGGAAGTGGAACAGCAGCAATCGCCGCTGCTCTCCACGCCTCTTC
CTCCGCCCCCCCTTGTGGCGCCTCCTCCCTTGGTCTCAGCTTCCGGTGAA
AGCAAAAGAGGGGATAGGCGGGAGGATGAGGAGGAAATTTGGAGTGGGGG
CAGTGAAGAGGAGCCATACTTTACCTTTTCGCCCTCATCTTTGCCTCCCG
AGTGCTACGgtacgcaagaagggagggagggagggagggaggaaccatgg
aaggaggaagggagggaaacgactacagaaattctcttctggtccttgaa
agactcaccatacaccttttctctcttcttcctcctttttacccccgccc
cctcaatttctccacgcagACACCGTGGACGGAGGCCGAGCGGGGTCTTC
ATGCCCCTCCTGGGTGGGAAGCAGTACTACCTACGATCCTGCCCAGCCCT
TCGCCCCCTATGGCATTGCCGAGCGCATCGCCTCCTTCCTGAGTGTGAAG
GATATAGCCGCCTACCTCGCCCTGGATGAGAAGGCCCAGTGGGGGTATGA
Ggtacggagggagggctggagggacggagggagggagagagggagggagg
gacgaccactggcgtgcttgctagccgtacttgccataggacttacaagc
acttgcctcctttcttccttccttctttccctctctccctcaccccttct
gtttctctgtagAGCTACACGACCATTCGTGACATTCTGGACTACCTCCT
TGGCTCCCTCTCCCTCCTTCGGCTCCTCGAGTGGGGCCTCGGGACCGCCG
GTCGTCTGGCCCACgtacgtcctccctccctccttccctcccttcctccc
tccctccctccctccctcccgcctttgtgtcctcagccttcctgcccctt
cttccctcccccccacggcagGGCTCGGTCATGCTGGTGGTGACGTGCGT
GCGAGGGGTAGGCAATGGCATACACGCCGTCTATGCACATgtacgtccac
cgtcccttcctccctcccacccaccctccctccctcccgtcctccctctc
tcgcaatatcctccttctcgtcatcatccgtcaaaccacctaattagccc
tccctccttccctccctccttccctccctccttccctccctccctccccc
cctcccttccagATTATGGCCACTCTCTCCTACTTCCTCCGTCTGGGTCT
CGCCCTCTGGCGTGAGCTCCGATCCCTCTCCCTTCGTGAGCTCGTCCGTG
CCCTCCTCCTCCTCCTCACCGACAAACTCGAACGTGATGTCACGGGACGG
gtacgtccgccgcccctccctccctccctccttccgcccctccctccctt
tcctccccctccaccactcacactcccgtccctccggccgtccctccctc
cctccctcctccagGAAAGCAGCAGTATGGGCTCTCGGTCCTCCTCGCAC
CACGGCTTAGGCCTTGGTGGCTCGTCCAAGGGCCCCCTCCTCGGCTCGGC
TGTCCTCAAAATGCCTTCCTTCTTCAATTCGTTCAAAgtacgcccgcccg
cccgccctccctccctccctccctccctccctcccactttccctcttctt
ggtcgagcgttcgactcatcttctcccaccctccctccctccctccctcc
ctccctccctctgtagGAGCTGGACGAGCCCGCACAAGGCGAGGACGAAG
CCGGTGAACCCTTTGCTTTCCTCTCAGgtacctccctccctccctccctc
cctctttccctccctccctctctcctcctcctccgccatgacaacctgcg
agtcactcccctccctccctccctccctccctccctccctccctcccccc
ccccctcctcctcctccgccatgacaacctgcgaatcactcccctccctc
ccgccctccctccctccctccctccctctctccctcccgccctcccgccc
tccctccctccctcagGCGCCATTCCCCAACTAAACGCCGGTCTCGGCCG
TCCATCCTCCAAGATGGGCCTTGTAGTATCCTATAGGGAAAAGAACGAAA
CCCTGTCCTCCCTGACCAAGCAGAAAGTCCGCCGCATGATGCACTACCAG
gtgcgtgcatatatatatacacacacacatatgtatatatgtattcatgt
gtgtacgtatatatgtgtgtctgtatatacatttaatacctctccattcg
cctccgtgcacagtcccttctcaaaccccctccctccctccctccctccc
tccctccctccctccagGTCCCCCTCAAGCCTTTCGAAGCCACCATCCGC
TGTGCCAACAAGACGGCTCAGCTCGAGGACGATGATGGCACGTACACCGC
CGGCGGAGgtaaggcaggcagccccctccctccctccctccctctttccc
tccctccctccctctcactgctcatccctccccccgcccttctctctcga
atgccggtctcaatctgttcctctcaccgctcctccctccccccccacag
GCAGCAGCACCAGCACCTTGGACCGAGCCCCCTCCTCCTCCTTCCGGCGC
TCCTCCTCCCTCTTCCCCTCCGTCATGTGCACCCCGCAGTCCTTCCCTCC
TACCCCCATCTCCCGCGCCTGCGTCATGGCTCGCTTCTCTCAGTTCTCGG
ACGACATCGTTTACCTGGCACGGGACCAGCTGCGGTTGGAAGAGCTCGgt
acgtcccctccctccctccctccctccctccacccctcccttgcttcgag
ggatgatcatgctgctcctgctactgacgtctgacacccccttccctccc
tccctccctccctccctccctccagTCAAGGCCGACGACGACGTGACCAA
GATGGCTGCCCAGTCCCTCAAGCAACAAGCCTGCCTCGCCGTCTTCAACT
CGGAAGgtacgccctccctccctccctccctccctccctccctctctccc
tccctccctccctccctcccttcctccctccccccctccctccctcccta
accctcctttccctccatctcacagACACGGCCACCGGCATCGTCCTCTC
CTGCGGGGGGCACTGCGCGACCAAGgcacgtctatctccccctccctccc
tccctccctcccttcctccctccctcctcccttcctccaagccgccaatt
tattcccccctccctccctccctccctccctccctccctccctccctcct
tccctcctagGTGGGCACCACGGGCCTCTACACCTCCACCCGGGCCATGG
TTCCCATCATGCGCAATCGCCATGTGTTCTTCCAGgtacgacaaacacct
ccctcccttcctctgtccccccgccctctttctctccactcacctccctc
cctctatcccgcactcattctctccactcacctccctccctccctccctc
cctccctcccctcctccctccctccgccccccctccagATGTCCATCATG
GCGGAGGAGTCTGCCGTCGCCTCCCTCTGCATCGGTTTATCCACCCCTGA
GATGCCCCTCAACACCCTCGTAGGCTCCTGGAAGTACAGCATTGGCTTTT
GCTCCACAGGCCAGgtacctccctccctccctccctccctccctccctcc
ctacctctatcgttttcgacccaacggactgatacaccctccctccctcc
ctccttccctccctccctcagATTCTGGTGGGCTCTCGCTGGTACGGCAG
TTCCACAAAACAGTATCGCTTCGGgtgcgttctctctccctccctccctc
cctccctccctcctctgggcttcaggttctgtcaattctcacccctccct
ccctccctccctccctccctccctccctctctttttctagGTGTGGGTGC
ACCATCGGTGTTCTCATCCACATAGACGAGTGCCGCTCTTCTGAGTCGTG
GGACGGCGAGCTCGgtgcgtccctccctccctccctccctccttccctcc
acactgtcacctcactgctgctccctccctccctccctctctccctcctt
ctctccctccctccactgtcacctcactgctgctccctccctccctcccc
ctctccctcacccccccctccctccacggtcatctcactgctgcttccta
ccttccctccctcccccccttcctccccccctccctccctctccagTCGA
GGCCTCCCTCAAATTTTCGGTCAATGGCATGCCCGTGCTGCTTGACGCAA
CCGATgtacgtccttccctccctccctcccccccttcctctctttcttcc
tccctcctccaagcattccacccacccctccttccttccttccctccctt
cctccctccctccctccctttcttcctctttccagGGCCACCCCGGCGGC
GACGTGACTCCCCTCTTCATCCCAAAGGATGACGATATATATCCCACACT
CACCCTCCACTCGCCCAGCACACAAGTCCTGGGCCGCTTTTGCGCAGCCG
ATATCCTGCATCCGCATCGgtaaacaagccctccttcccttcctccctcc
ctccaatcctccctccatccttcttcccatccgtgcccccttttttcgcg
tcctcgctaattccttcctccctccctccctccctccctccctacccagG
TCCCTGGTCGGGGCGCCTCTTGGAGTGCCTGTGTATGCTCTGGATGGGAG
TGTCATCCTCAAGCCCGATCAGGACGTGGGAACCAGCAATATATAGGGAG
GAAGGGAGGAGCGTGTTGCCGGAAAGAGGGTGGCATATCGATTTGTTAAT
GTTGACTTCCATTCTTAAAAGACAGGGGGGAAAGGAAGGAAGAGAATGAG
GGAGGACAGAAGGCATGTGTATCATTTGTATGTGAGAGCGGAGGGTGTGT
GAGTGGTTGTGTGAGTGGGGAGGACGGCCGAGAGGGGAGGAATGGAAGAA
GGGAGGGGGGAAGGTGAATGCAGGGAGGGTAGATATCGGAGCATTCTGCA
CATGAGCGCCTCTCTTTTCGTGAAGAGGAAACGATAGATATCTCATGGAG
AGGGGCGGAATGGGGAGAGGGGAAAAAAGGCGACACGGCACTTGTAGTAG
TATGAGGACGAGGAGGAGAAAGTGGAGGGGGAGTAGGAGGAGAGGAGGAG
GCGGAGGAGAATTAGAAAACGAGGACAAGGGGAAGAAAAAGTAGAGGAAG
GAGAAGGAGAAGGCGGAGGAGAAGTGGGGGAGTGTCATAAGGCGCTTTCA
AGCAACAGCAGCAGCAGCAGCAGTAGCAGATGGAAGCAGAATATCCTGGA
TTTGTGAGAAATCTTGTGTGCGCACTTGGTCTTTTTTTGGAAAAAGTTAT
TAATTTATATCGGCAGATAATGTGCATGTTGCTTCGAAACACCCCCCCGA
AAACGTCGCCGAGTACATAAATTATTTGCGCGAAAAAGGTGTTAAAAAAA
AGCTACCAACCATAAAGATATTTGGAAAG
back to top

protein sequence of NO07G00300.1

>NO07G00300.1-protein ID=NO07G00300.1-protein|Name=NO07G00300.1|organism=Nannochloropsis oceanica|type=polypeptide|length=782bp
MKAMKAALGSVGGKKERQQQQQRQQQQLQQLQHQQQQEAAAAAVLEAPSP
SLSPPLPPTVLLHSMPLSVPMTMEEGKGEGVGEEQQQQHQGGIQVDVVEE
VEQQQSPLLSTPLPPPPLVAPPPLVSASGESKRGDRREDEEEIWSGGSEE
EPYFTFSPSSLPPECYDTVDGGRAGSSCPSWVGSSTTYDPAQPFAPYGIA
ERIASFLSVKDIAAYLALDEKAQWGYESYTTIRDILDYLLGSLSLLRLLE
WGLGTAGRLAHGSVMLVVTCVRGVGNGIHAVYAHIMATLSYFLRLGLALW
RELRSLSLRELVRALLLLLTDKLERDVTGRESSSMGSRSSSHHGLGLGGS
SKGPLLGSAVLKMPSFFNSFKELDEPAQGEDEAGEPFAFLSGAIPQLNAG
LGRPSSKMGLVVSYREKNETLSSLTKQKVRRMMHYQVPLKPFEATIRCAN
KTAQLEDDDGTYTAGGGSSTSTLDRAPSSSFRRSSSLFPSVMCTPQSFPP
TPISRACVMARFSQFSDDIVYLARDQLRLEELVKADDDVTKMAAQSLKQQ
ACLAVFNSEDTATGIVLSCGGHCATKVGTTGLYTSTRAMVPIMRNRHVFF
QMSIMAEESAVASLCIGLSTPEMPLNTLVGSWKYSIGFCSTGQILVGSRW
YGSSTKQYRFGCGCTIGVLIHIDECRSSESWDGELVEASLKFSVNGMPVL
LDATDGHPGGDVTPLFIPKDDDIYPTLTLHSPSTQVLGRFCAADILHPHR
SLVGAPLGVPVYALDGSVILKPDQDVGTSNI*
back to top
Synonyms
Publications