NO07G00270, NO07G00270 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00270 vs. NCBI_GenBank
Match: EWM27360.1 (Plastid lipid-associated protein/fibrillin conserved domain protein, partial [Nannochloropsis gaditana]) HSP 1 Score: 223.8 bits (569), Expect = 7.200e-55 Identity = 127/185 (68.65%), Postives = 144/185 (77.84%), Query Frame = 0 Query: 1 MSRLFYLPL-LLLLLPVLTPAFLFPATRLALPARQQRSLLHSTVDAADYPSDTADPDNSVDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLSAEDFFRLHRLATRGSEIGKV 185 MSRL PL LLLLLP + AFL P R ++P+R S+L S+V+ ADYPSDTADP+ S +A N T P DE K QLRE FKCQIYKAA+RLNRGQL NLDQ+NEM NL+AQLEA+G+GR + E VEGVWELVY+DV PFR SPFF TVGKVM GTTLSAE+FFRLHRLATRGSEIGKV Sbjct: 1 MSRLCAKPLFLLLLLPCIASAFLLPFPRASIPSRSP-SVLLSSVEGADYPSDTADPEPSPEAREG-NATVFPSFTDEGKVQLREKFKCQIYKAAARLNRGQLANLDQQNEMSNLIAQLEAMGSGRPAETEAVEGVWELVYSDVAPFRASPFFMTVGKVMEGTTLSAEEFFRLHRLATRGSEIGKV 183
BLAST of NO07G00270 vs. NCBI_GenBank
Match: CBN77872.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 136.7 bits (343), Expect = 1.200e-28 Identity = 91/256 (35.55%), Postives = 129/256 (50.39%), Query Frame = 0 Query: 44 DAADYPSDTADPDNSVDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALG-AGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLSAEDFFRLHRLATRGSEIGKVRQIITSQELVSEVEIISG-IPSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSVFALLGGGGNLPELPLADIAERVGLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 +A D+PSD D S + P V + +LRE K ++ A+ NRGQ+ ++K+ ++L+ QLE+L + + + G WELVYTD +PFR SPFF +G+V G AE F LHR AT EIG+VRQ I+ LVSE+++ G +P +P + GTVVT+A TL+ G++PE L +TYY+D +MRISR DDH FV+ R Sbjct: 5 EAGDFPSDVGDAAGS---------SAVPAVLADDNPELRETMKREVLSIAATSNRGQVATQEEKDAAMDLIFQLESLNPTPDATNVNTIGGAWELVYTDTQPFRCSPFFMALGEVFGEKKGQAETLFSLHRAATSNGEIGRVRQTISESMLVSEIDLKVGLLPGLPMALKGTVVTKARLNPVS------TLR----------------GSVPEAKL----------------STYYLDEDMRISRMSDDHVFVFVR 213
BLAST of NO07G00270 vs. NCBI_GenBank
Match: XP_002286692.1 (predicted protein [Thalassiosira pseudonana CCMP1335] >EED96333.1 predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 131.0 bits (328), Expect = 6.400e-27 Identity = 93/256 (36.33%), Postives = 139/256 (54.30%), Query Frame = 0 Query: 48 YPSDTADPDNSVDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLS-AEDFFRLHRLATRGSEIGKVRQIIT--SQELVSEVEIISG-IPSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSV--FALLGGGGNLPELPLADIAERVGLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 YPSD D S + S + DE +R+ K ++ +S NRGQ + +++N +++LV QLEAL + A + +G WEL Y+ + FR SPFF + MG + S AE+ F +H AT S +GKVRQI+ + EL+SE E+ G +P +P + GTV+T A LT+K++ V+ S+V F L ELP+ + + + P ++ T+YVD MRISRD DD+FFV+ R Sbjct: 56 YPSDYDVEDLSTEKKVSVD-------IDEDDAIIRDELKRELLLLSSVTNRGQCASQEEENLVVDLVTQLEALNP-TADPALNSQGDWELCYSSTQSFRSSPFFLAIRSFMGESNKSMAENAFDIHDRATTASRVGKVRQIVDAGNMELISEYELSVGLLPGLPVRVKGTVITSADMRAIAPETWELTVKATKVKGSNVPFFDQYLDDSGL-ELPVGEAYKAISGSVPVSVLKTFYVDEGMRISRDVDDNFFVFTR 302
BLAST of NO07G00270 vs. NCBI_GenBank
Match: CEL92680.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 125.2 bits (313), Expect = 3.500e-25 Identity = 101/307 (32.90%), Postives = 159/307 (51.79%), Query Frame = 0 Query: 10 LLLLLPVLTPAFLFPATRLALPARQ------QRSLLHSTVDAADYPSDTADPDNS----VDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQK---NEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTL--SAEDFFRLHRLATRGSEIGKVRQIITSQELVSEVEIISG-IPSIPFEISGTVVTRASAARTQEGG---LRLTLKSSGVQSSSVFALLGGGGNLPELPLADIAERVGLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 L LL +LT AF+ PA + Q R+L DA P T +++ +D S + A + + K +++ A+R +RGQL +K N++ + +A + A G G+ +++G WEL+Y DV+ FR SPF+ T+ ++ G T AE F LHRL TR SEIG+VRQ + ++VSEV++ G +P +P + GTVV+ A + G + L L S+ V+ ++V +LG +P L + +G PSV +T YVD ++RIS+ +D H FV+ R Sbjct: 10 LFLLSSILTSAFILPARPSSSFGPQGTRHSTTRTLSSRADDAIASPVLTTTVEDTFPSEIDISDDDAANNNREAAVTLDKTQVDELKRELFLIAARTSRGQLAKPYEKEMVNDICSSLAAMAADGNGKEGGDANIDGTWELLYGDVQLFRQSPFWMTLRRLFGSATALPQAESLFDLHRLQTRVSEIGRVRQKVADGKMVSEVDLAVGLLPGLPMAVKGTVVSSADVRPVKGGSANDMALQLLSTYVRDANVLPMLGRRIRIPWGAL--MRGALGGSLPSVKYSTLYVDDDLRISKTDDGHLFVYVR 314
BLAST of NO07G00270 vs. NCBI_GenBank
Match: OEU16661.1 (hypothetical protein FRACYDRAFT_225795 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 125.2 bits (313), Expect = 3.500e-25 Identity = 99/284 (34.86%), Postives = 153/284 (53.87%), Query Frame = 0 Query: 21 FLFPATRLALPARQQRSLLHSTVDAADYPSDTADPDNSVDASTSRNGTDPPPVADEAKQ--QLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLS-AEDFFRLHRLATRGSEIGKVRQIITS-QELVSEVEI-ISGIPSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSV-FALLGGGGNLPELPLADIAERV-GLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 FL A + + + S L D AD +D D + S S+ T DE ++ ++R+ K ++ AS +RG + ++++ +I+LVAQLEAL R+ A EG W+L Y+ + FR SPFFQ++ +G E+ F LH AT GS +G+VRQI+TS +L+SEV + + +P IP + GTVVT AS + L ++++ V S++ F + ELP+ D V P + MTT+YVD +RI+RD D++FFV+ R Sbjct: 4 FLNMAATIRVASSSPSSSLIICYDYAD-DGSPSDYDTADLPSASKEVT-----VDEKEEDIEIRDALKRELLLLASVTDRGAFASKEERDIVIDLVAQLEALNPTRN-PASHCEGEWDLCYSSTQFFRSSPFFQSIRVAVGDENKDMTENGFALHEQATMGSRVGRVRQIVTSDNKLISEVSLEVGTLPGIPISLQGTVVTTASLDVVSDKNWELQIENTKVTGSNIPFINMFMDDLQVELPVGDFYSTVMSGKVPVIPMTTFYVDEALRITRDIDENFFVFIR 280
BLAST of NO07G00270 vs. NCBI_GenBank
Match: EJK68684.1 (hypothetical protein THAOC_10115 [Thalassiosira oceanica]) HSP 1 Score: 120.2 bits (300), Expect = 1.100e-23 Identity = 97/291 (33.33%), Postives = 149/291 (51.20%), Query Frame = 0 Query: 11 LLLLPVLTPAFLFPATRLALPARQQRSLLHSTVDAADY--PSDTADPDNSVDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLS-AEDFFRLHRLATRGSEIGKVRQIITS--QELVSEVEIISGI-PSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSV-FALLGGGGNLPELPLADIAERV-GLFPPSVLMTTYYVDANMRISRDEDDHFF 294 +L + VL+ F + AR + H Y P D P + DA G +E+ +R+ K ++ AS NRGQ L+++N +I+LV QLEAL + A + +G WEL Y+ + FR SPFF + +G AE+ F +H +AT S +GKVRQII S EL+SE ++ G+ P +P + G VVT A + + + ++ + V+SS+V F + E+P+ + E + G P+ ++ TYYVD MRISRD D++FF Sbjct: 1 MLAVAVLSSFLTFGSVGAFQSARSIAKIQHQEWIGRVYSLPDDDGAP-SDYDADDLSMGKHVEVDENESDSIIRDELKRELILLASTTNRGQCATLEEQNLVIDLVTQLEALNP-TADPALNSQGDWELCYSSTQSFRSSPFFLAIRAFLGDDNKEVAENAFSIHDMATTASRVGKVRQIIDSYNTELISEYDLSVGVAPGLPVRVKGCVVTSADLSVSAPETWEMKVRGTRVKSSNVPFIDEWLDDSQVEVPVGRVYEAINGGDVPAAILKTYYVDEGMRISRDADENFF 289
BLAST of NO07G00270 vs. NCBI_GenBank
Match: GAX28473.1 (hypothetical protein FisN_38Hh034 [Fistulifera solaris]) HSP 1 Score: 119.4 bits (298), Expect = 1.900e-23 Identity = 79/226 (34.96%), Postives = 125/226 (55.31%), Query Frame = 0 Query: 75 DEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLSAEDFFRLHRLATRGSEIGKVRQIITSQELV-SEVEIISGIPSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSVFALLGGGGNLP--ELPLADIAERVGLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 +E +R+ K ++ +S NRG+ + D++N +++LVAQLEAL S A + +G W+L + + FR SPFFQ++ + L + F LH A+ S +G+VRQ I L+ S V++ G P +P + GTVVT A+ + L + + V+ S++ L P ++P+ D+ +R+ P V M TYYVD MRI+RD DD+FFV+ R Sbjct: 41 NEEDASIRDALKRELLLLSSVTNRGEYCSKDEQNILVDLVAQLEALNPTAS-PARNCQGEWDLCLSSTQFFRSSPFFQSLRVAVNDKAL-INNGFDLHDRASTPSRVGRVRQTIDDNNLLTSSVDLQVGFPLLPLRVEGTVVTTATMKVVSDDLAELQIVKTQVRGSNI-PFLNEYLEDPRLDMPMGDLYQRLNGKVPVVPMKTYYVDEGMRIARDIDDNFFVFTR 263
BLAST of NO07G00270 vs. NCBI_GenBank
Match: XP_002176901.1 (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >EEC51364.1 predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 119.0 bits (297), Expect = 2.500e-23 Identity = 89/282 (31.56%), Postives = 143/282 (50.71%), Query Frame = 0 Query: 32 ARQQRSLL---HSTVDAADYPSDTADPDNSVDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMG-GTTLSAEDFFRLHRLATRGSEIGKVRQIITSQELVSEVEIISG-IPSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSVFALLGGGGNLP-----------ELPLADIAERVGLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 AR +S L ++ D +DY D AD + N EA +R++ K ++ +S NRG+ + D++N ++++VAQLEAL + A + +G W+L + + FR SPFFQ++ MG AE+ F +H AT S +G+VRQ I+ +L+SEVE+ G +P P + GTV+T A+ L + S + + G N+P E+P+++I + P V M T+Y+D +RI+RD DD+ FV+ R Sbjct: 38 ARGSKSALFQFYTESDPSDY--DAADLTGEKSVAVDEN---------EADSIIRDDLKRELLLLSSVTNRGEYASPDEQNIIVDIVAQLEALNP-TADPASNCQGEWDLALSSTQFFRSSPFFQSIRVAMGENNKAMAENAFDIHDRATTASRVGRVRQTISDTKLLSEVELEVGLLPGFPIRVKGTVITSAT----------LDVVSPETWETRIIETHVKGSNIPIINEFLDDARFEIPVSNIYNTLQGQVPVVPMKTFYLDEGVRITRDIDDNIFVFTR 297
BLAST of NO07G00270 vs. NCBI_GenBank
Match: GAX09614.1 (hypothetical protein FisN_38Lh034 [Fistulifera solaris]) HSP 1 Score: 112.1 bits (279), Expect = 3.100e-21 Identity = 89/285 (31.23%), Postives = 140/285 (49.12%), Query Frame = 0 Query: 16 VLTPAFLFPATRLALPARQQRSLLHSTVDAADYPSDTADPDNSVDASTSRNGTDPPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGGTTLSAEDFFRLHRLATRGSEIGKVRQIITSQELV-SEVEIISGIPSIPFEISGTVVTRASAARTQEGGLRLTLKSSGVQSSSVFALLGGGGNLP--ELPLADIAERVGLFPPSVLMTTYYVDANMRISRDEDDHFFVWAR 298 +LT AF T +R + +DY D D A+ N E +R+ K ++ +S NRG+ + D++N +++LVAQLEAL S A + +G W+L + + FR SPFFQ++ + L + F LH A+ S +G+VRQ I L+ S V++ G+P +P + GTVVT A+ + L + + V+ S++ L P ++P+ D+ + P V + TYYVD MRI+RD DD+FFV+ R Sbjct: 4 LLTSAFQMLPTTTTTTGSSKRWAFDTDSAPSDY--DFQDLTGEKSATVDEN---------EEDASIRDALKRELLLLSSVTNRGEYCSKDEQNILVDLVAQLEALNPTAS-PARNCQGEWDLCLSSTQFFRSSPFFQSLRVAVNDKAL-INNGFDLHDRASTPSRVGRVRQTIDDNNLLTSSVDLQVGVPLLPLRVEGTVVTTATMKVVSDDLAELQIVKTQVRGSNI-PFLNEYLEDPRLDMPMGDLYQMFNGKVPVVPVKTYYVDEGMRIARDIDDNFFVFTR 274
BLAST of NO07G00270 vs. NCBI_GenBank
Match: KOO23389.1 (hypothetical protein Ctob_005644 [Chrysochromulina sp. CCMP291]) HSP 1 Score: 103.6 bits (257), Expect = 1.100e-18 Identity = 87/264 (32.95%), Postives = 125/264 (47.35%), Query Frame = 0 Query: 70 PPPVADEAKQQLRENFKCQIYKAASRLNRGQLQNLDQKNEMINLVAQLEALGAGRSVDAEDVEGVWELVYTDVEPFRVSPFFQTVGKVMGG-TTLSAEDFFRLHRLATRGSEIGKVRQII----------TSQELVSEVEIISGI-PSIPFEISGTVVTRASAARTQE-----GGLRLTLKSSGVQSSSV---FALLGGGGNLPELPLA----DIAERVGLFPPSV------------LMTTYYVDANMRISRDEDDHFFVWAR 298 PPP + +LR + K + + + RGQ + + + VAQLE++G D+ G W+LV TDVEPFR SPF+ +G + +A+ F HRLAT E+G+VR+ I + L SEV I +G+ P +P SG VVT A + G L L + V+ S++ + LGG + EL L D A VG SV L+ T Y+D +R+SR D+HFFV+ R Sbjct: 18 PPPTDFYERAKLRVDLKAALVRLGASSGRGQFFSTAECAKACEYVAQLESVGL--PALPSDLTGTWDLVLTDVEPFRASPFWWALGSALDAFKPGAAKRIFPAHRLATSVGEVGRVRRTIDLVSVDPSVAATGWLTSEVGIKAGVLPGLPLAFSGDVVTTAEVQLLGDETGAVGALSAKLLDTVVRRSTLLYGYVALGGTTSRGELSLGRLFDDRALPVGNMLRSVRGGGDADVAKRPLLRTSYLDEELRVSRTPDEHFFVFVR 279 The following BLAST results are available for this feature:
BLAST of NO07G00270 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00270 ID=NO07G00270|Name=NO07G00270|organism=Nannochloropsis oceanica|type=gene|length=1604bpback to top protein sequence of NO07G00270.1 >NO07G00270.1-protein ID=NO07G00270.1-protein|Name=NO07G00270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=301bpback to top Synonyms
Publications
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