NO07G00250, NO07G00250 (gene) Nannochloropsis oceanica
Overview
Properties
Mutants
Expression
Hover the mouse over a column in the graph to view expression values. Alignments
The following features are aligned
Analyses
This gene is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this gene:
Homology
BLAST of NO07G00250 vs. NCBI_GenBank
Match: XP_005855889.1 (peroxiredoxin q [Nannochloropsis gaditana CCMP526] >EKU20465.1 peroxiredoxin q [Nannochloropsis gaditana CCMP526] >EWM27365.1 peroxiredoxin q [Nannochloropsis gaditana]) HSP 1 Score: 292.7 bits (748), Expect = 7.600e-76 Identity = 145/179 (81.01%), Postives = 166/179 (92.74%), Query Frame = 0 Query: 1 MRVISVLAISFLAAAQAFMPTATP-VTRSRGALSMVKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSDQDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 MR+ISVLA+S + AAQAFMP+ P + RSRG ++M+KVGD APDF+LKDQNNK+VKLS+FKGKK VVLFFYPKDDTPGCTKEAKAF+AAL DFKKKGAEVFGISSD+DH+AFV+KYGLQMQLLSDVGGATRKAY+VP+SLFGAL+GRVTYVIGKDQ ++L+YDNQFAPESHVEKSL L Sbjct: 1 MRIISVLALSLVMAAQAFMPSNGPSMGRSRGVMNMLKVGDAAPDFALKDQNNKVVKLSTFKGKKEVVLFFYPKDDTPGCTKEAKAFSAALGDFKKKGAEVFGISSDEDHTAFVDKYGLQMQLLSDVGGATRKAYQVPSSLFGALDGRVTYVIGKDQKIRLIYDNQFAPESHVEKSLGTL 179
BLAST of NO07G00250 vs. NCBI_GenBank
Match: CEM19577.1 (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 203.0 bits (515), Expect = 7.900e-49 Identity = 106/182 (58.24%), Postives = 131/182 (71.98%), Query Frame = 0 Query: 6 VLAISFLAAAQAFMPT--ATPVTRSR-------GALSMVKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSDQDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 + A + L +F+P+ A P+ R LSMVKVG++APDFSLKDQ+ K+VKLSSFK KK VV+FFYP D TPGCTK+A+AFN AL DFKK GAEV G+SSD DHS F+ YGL+M LLSD+GG RK ++VP ++FGAL GRVTYVIGKD VK +YDN ESH+ ++ AL Sbjct: 13 ICAANALKETASFVPSPQALPIRFRRPSLSHRYAPLSMVKVGEMAPDFSLKDQSGKVVKLSSFKNKKSVVVFFYPADMTPGCTKQAQAFNTALDDFKKLGAEVIGVSSDADHSEFISAYGLKMTLLSDIGGEVRKQWQVPGAMFGALPGRVTYVIGKDGIVKKVYDNLLDSESHIPQARAAL 194
BLAST of NO07G00250 vs. NCBI_GenBank
Match: XP_005708785.1 (peroxiredoxin Q/BCP [Galdieria sulphuraria] >EME32265.1 peroxiredoxin Q/BCP [Galdieria sulphuraria]) HSP 1 Score: 181.8 bits (460), Expect = 1.900e-42 Identity = 91/147 (61.90%), Postives = 108/147 (73.47%), Query Frame = 0 Query: 32 LSMVKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSDQDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 L+MVK G+ APDFSLKDQ+ V+LS FKGKK V+L+FYPKDDTPGCTK+A F A+ DF + GAEV G+SSDQDH FVEKY L +LLSD G RK Y+VP S FG L GRVTYVI + VK +Y+NQF E HVE++ AL Sbjct: 54 LNMVKEGEAAPDFSLKDQDGNNVRLSDFKGKKAVILYFYPKDDTPGCTKQALCFREAIEDFAQLGAEVIGVSSDQDHRKFVEKYKLPFKLLSDEGSKVRKLYEVP-STFGILPGRVTYVIDRQGIVKKIYNNQFRSELHVEEAKKAL 199
BLAST of NO07G00250 vs. NCBI_GenBank
Match: CBN79489.1 (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 174.5 bits (441), Expect = 3.000e-40 Identity = 86/145 (59.31%), Postives = 105/145 (72.41%), Query Frame = 0 Query: 34 MVKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSDQDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 MV VG APDF L +QN K V LSSFK KK VV+FFYPKD TPGCTKEA+ F + LA FKK GAEV GISSD DH+ FV++ L M LLSD+GG RKA+KV ++FG ++GRVTYV+ K+ V MYDN +H +++L AL Sbjct: 1 MVSVGQAAPDFKLNNQNGKPVALSSFKNKKKVVVFFYPKDSTPGCTKEAQTFQSDLAKFKKAGAEVIGISSDADHTEFVKENNLSMTLLSDIGGKVRKAWKVKGAVFGTIDGRVTYVLDKNGVVTSMYDNLLDGAAHSKEALKAL 145
BLAST of NO07G00250 vs. NCBI_GenBank
Match: XP_005649012.1 (alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Coccomyxa subellipsoidea C-169] >EIE24468.1 alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 170.2 bits (430), Expect = 5.700e-39 Identity = 87/152 (57.24%), Postives = 107/152 (70.39%), Query Frame = 0 Query: 31 ALSMVKVGDVAPDFSLKDQNNKIVKLSSFKG--KKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSD--QDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 AL KVGD APDFSLKDQ+ K VKLSS++G KPVVL+FYP D +PGCTK+AKAF A+ +FKK GA V G+S D + H F + G+ QLL+D G RK Y V L G LEGR TYVIGKD VKL+++NQ+ PE HV+++L AL Sbjct: 3 ALHATKVGDKAPDFSLKDQSGKTVKLSSYQGIFGKPVVLYFYPADASPGCTKQAKAFTDAIGEFKKAGATVVGVSGDDVESHQKFKSELGIPFQLLADEGNEVRKTYGVKKDLLGLLEGRQTYVIGKDGIVKLVFNNQWEPEKHVDEALKAL 154
BLAST of NO07G00250 vs. NCBI_GenBank
Match: ABK23972.1 (unknown [Picea sitchensis]) HSP 1 Score: 163.7 bits (413), Expect = 5.300e-37 Identity = 87/162 (53.70%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 19 MPTATPVTRSRGALSMVKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSD--QDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 MP T TR A++ V G V P F+LK+Q+ ++V LS FKG KPVVL+FYP D+TPGCTKEA AF + FKK GAEV GIS D + H AF +KY L LLSD G RK + VP FG+L GR TYVI K V+L+Y+NQF PE HV+++L L Sbjct: 56 MPARTLQTRKMIAVAKVSKGSVPPTFNLKNQDGRMVNLSKFKG-KPVVLYFYPADETPGCTKEACAFRDSYEKFKKAGAEVIGISGDSPESHKAFAKKYRLPFTLLSDEGNKLRKEWGVPGDFFGSLPGRETYVIDKKGVVQLVYNNQFQPEKHVDETLKML 216
BLAST of NO07G00250 vs. NCBI_GenBank
Match: GAQ78506.1 (peroxiredoxin [Klebsormidium nitens]) HSP 1 Score: 163.7 bits (413), Expect = 5.300e-37 Identity = 81/146 (55.48%), Postives = 103/146 (70.55%), Query Frame = 0 Query: 35 VKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSD--QDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 V +GD AP FSL DQN + V LS FKG KPVVL+FYPKDDTPGCTK+A +F + ADFKK GAEV GIS+D + H AF EKY L LLSD + R+A+ + FGAL GR TYV+ K V+L+++NQF+PE HV +++ + Sbjct: 92 VSIGDEAPSFSLADQNGRTVSLSKFKG-KPVVLYFYPKDDTPGCTKQACSFRDSYADFKKAGAEVVGISADSPESHKAFAEKYDLPFTLLSDEDNSVRQAFGIKGDFFGALPGRETYVLDKKGVVQLVFNNQFSPEKHVAETIKVI 236
BLAST of NO07G00250 vs. NCBI_GenBank
Match: ABK21333.1 (unknown [Picea sitchensis]) HSP 1 Score: 162.9 bits (411), Expect = 9.100e-37 Identity = 86/162 (53.09%), Postives = 107/162 (66.05%), Query Frame = 0 Query: 19 MPTATPVTRSRGALSMVKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSD--QDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 MP T TR A++ V G V P F+LK+Q+ ++V LS FKG KPVVL+FYP D+TPGCTKEA AF + FK+ GAEV GIS D + H AF +KY L LLSD G RK + VP FG+L GR TYVI K V+L+Y+NQF PE HV+++L L Sbjct: 56 MPARTLQTRKMIAVAKVSKGSVPPSFNLKNQDGRMVNLSKFKG-KPVVLYFYPADETPGCTKEACAFRDSYEKFKRAGAEVIGISGDSPESHKAFAKKYRLPFTLLSDEGNKLRKEWGVPGDFFGSLPGRETYVIDKKGVVQLVYNNQFQPEKHVDETLKML 216
BLAST of NO07G00250 vs. NCBI_GenBank
Match: XP_020680031.1 (peroxiredoxin Q, chloroplastic [Dendrobium catenatum]) HSP 1 Score: 162.2 bits (409), Expect = 1.500e-36 Identity = 84/146 (57.53%), Postives = 100/146 (68.49%), Query Frame = 0 Query: 35 VKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSD--QDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 V GDV P+F+LKDQN K V LS++KG KPVV++FYP D++PGCTKEA AF + FKK GAEV GIS D H AF KY L LLSD G RK + VP+ LFG L GR TYVI K VKL+Y+NQF PE HV+++L L Sbjct: 65 VSKGDVPPNFNLKDQNGKNVSLSNYKG-KPVVVYFYPADESPGCTKEACAFRDSYEKFKKAGAEVVGISGDDPSSHKAFASKYKLPFTLLSDEGNKVRKQWGVPSDLFGTLAGRETYVIDKKGVVKLVYNNQFQPEKHVDETLKLL 209
BLAST of NO07G00250 vs. NCBI_GenBank
Match: PKU74791.1 (Peroxiredoxin Q, chloroplastic [Dendrobium catenatum]) HSP 1 Score: 162.2 bits (409), Expect = 1.500e-36 Identity = 84/146 (57.53%), Postives = 100/146 (68.49%), Query Frame = 0 Query: 35 VKVGDVAPDFSLKDQNNKIVKLSSFKGKKPVVLFFYPKDDTPGCTKEAKAFNAALADFKKKGAEVFGISSD--QDHSAFVEKYGLQMQLLSDVGGATRKAYKVPTSLFGALEGRVTYVIGKDQTVKLMYDNQFAPESHVEKSLMAL 179 V GDV P+F+LKDQN K V LS++KG KPVV++FYP D++PGCTKEA AF + FKK GAEV GIS D H AF KY L LLSD G RK + VP+ LFG L GR TYVI K VKL+Y+NQF PE HV+++L L Sbjct: 74 VSKGDVPPNFNLKDQNGKNVSLSNYKG-KPVVVYFYPADESPGCTKEACAFRDSYEKFKKAGAEVVGISGDDPSSHKAFASKYKLPFTLLSDEGNKVRKQWGVPSDLFGTLAGRETYVIDKKGVVKLVYNNQFQPEKHVDETLKLL 218 The following BLAST results are available for this feature:
BLAST of NO07G00250 vs. NCBI_GenBank
Analysis Date: 2019-07-11 (BLASTP analysis of N. oceanica IMET1 genes) Total hits: 20
Pagesback to topRelationships
This gene is member of the following syntenic_region feature(s):
This gene is orthologous to the following gene feature(s):
The following polypeptide feature(s) derives from this gene:
The following gene feature(s) are orthologous to this gene:
The following mRNA feature(s) are a part of this gene:
Sequences
The following sequences are available for this feature:
gene sequence >NO07G00250 ID=NO07G00250|Name=NO07G00250|organism=Nannochloropsis oceanica|type=gene|length=1594bpback to top protein sequence of NO07G00250.1 >NO07G00250.1-protein ID=NO07G00250.1-protein|Name=NO07G00250.1|organism=Nannochloropsis oceanica|type=polypeptide|length=180bpback to top Synonyms
Publications
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